How to set the map task timeout? - timeout

I tried this
Configuration conf = new Configuration();
conf.set("mapred.task.timeout", "1000");
Job job = new Job(conf);
But I think it is not working.
I am trying to set mapred.task.timeout to 1000 and in the map class I am giving a " Thread.sleep(2000); " and expecting it to throw an exception. But it it running fine. Shouldn't this throw an exception?

That is an old, deprecated config setting. It may be that you need the newer equivalent, mapreduce.task.timeout. Also, call Configuration.setInt() instead.

Related

Query timeout in Neo4j 3.0.6

It looks like previously working approach is deprecated now:
unsupported.dbms.executiontime_limit.enabled=true
unsupported.dbms.executiontime_limit.time=1s
According to the documentation new variables are responsible for timeouts handling:
dbms.transaction.timeout
dbms.transaction_timeout
At the same time the new variables look related to the transactions.
The new timeout variables look not working. They were set in the neo4j.conf as follows:
dbms.transaction_timeout=5s
dbms.transaction.timeout=5s
Slow cypher query isn't terminated.
Then the Neo4j plugin was added to model a slow query with transaction:
#Procedure("test.slowQuery")
public Stream<Res> slowQuery(#Name("delay") Number Delay )
{
ArrayList<Res> res = new ArrayList<>();
try ( Transaction tx = db.beginTx() ){
Thread.sleep(Delay.intValue(), 0);
tx.success();
} catch (Exception e) {
System.out.println(e);
}
return res.stream();
}
The function served by the plugin is executed with neoism Golang package. And the timeout isn't triggered as well.
The timeout is only honored if your procedure code invokes either operations on the graph like reading nodes and rels or explicitly checks if the current transaction is marked as terminate.
For the later, see https://github.com/neo4j-contrib/neo4j-apoc-procedures/blob/master/src/main/java/apoc/util/Utils.java#L41-L51 as example.
According to the documentation the transaction guard is interested in orphaned transactions only.
The server guards against orphaned transactions by using a timeout. If there are no requests for a given transaction within the timeout period, the server will roll it back. You can configure the timeout in the server configuration, by setting dbms.transaction_timeout to the number of seconds before timeout. The default timeout is 60 seconds.
I've not found a way how to trigger timeout for a query which isn't orphaned with a native functionality.
#StefanArmbruster pointed a good direction. The timeout triggering functionality can be got with creating a wrapper function in Neo4j plugin like it is made in apoc.

Grails + CXF + secureServiceFactory

When I try run this script to secure my web services on Grails / CXF client I get
"Cannot invoke method getInInterceptors() on null object" on secureServiceFactory
Does secureServiceFactory need to be set somewhere else?
Any ideas:
Code :
class BootStrap {
def secureServiceFactory
def init = { servletContext ->
Map<String, Object> inProps = [:]
inProps.put(WSHandlerConstants.ACTION, WSHandlerConstants.USERNAME_TOKEN);
inProps.put(WSHandlerConstants.PASSWORD_TYPE, WSConstants.PW_TEXT);
Map<QName, Validator> validatorMap = new HashMap<QName, Validator>();
validatorMap.put(WSSecurityEngine.USERNAME_TOKEN, new UsernameTokenValidator() {
#Override
protected void verifyPlaintextPassword(org.apache.ws.security.message.token.UsernameToken usernameToken, org.apache.ws.security.handler.RequestData data)
throws org.apache.ws.security.WSSecurityException {
if(data.username == "wsuser" && usernameToken.password == "secret") {
println "username and password are correct!"
} else {
println "username and password are NOT correct..."
throw new WSSecurityException("user and/or password mismatch")
}
}
});
inProps.put(WSS4JInInterceptor.VALIDATOR_MAP, validatorMap);
secureServiceFactory.getInInterceptors().add(new WSS4JInInterceptor(inProps))
}
Not sure this is a total answer, but, I receive the same errors and I understand that the cxf plugin is meant to wire up service factories that will match the name of your exposed service. I have verified that out of the box, running the grails-cxf plugin using grails run-app the application works. however, by executing grails war on the project creates a war that when deployed to tc server [vfabric-tc-server-developer-2.9.4.RELEASE] tomcat 7 [tomcat-7.0.47.A.RELEASE], this error occurs.
It is also useful to note that out of the box, as the plugin author has noted in other references [http://www.christianoestreich.com/2012/04/grails-cxf-interceptor-injection/] the generated war won't work unless you change test('org.apache.ws.security:wss4j:1.6.7') to compile('org.apache.ws.security:wss4j:1.6.7') and I note that I was unable to make that work, I had to use compile('org.apache.ws.security:wss4j:1.6.9')
Unfortunately, after surpassing this, I run into a third error when deploying the war that doesn't occur in grails run-app:
22-Aug-2014 11:46:05.062 SEVERE [tomcat-http--1] org.apache.catalina.core.StandardWrapperValve.invoke Allocate exception for servlet CxfServlet
org.springframework.beans.factory.NoSuchBeanDefinitionException: No bean named 'cxf' is defined
at org.springframework.beans.factory.support.DefaultListableBeanFactory.getBeanDefinition(DefaultListableBeanFactory.java:641)
at org.springframework.beans.factory.support.AbstractBeanFactory.getMergedLocalBeanDefinition(AbstractBeanFactory.java:1159)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:282)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:200)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:273)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:200)
at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:979)
at org.apache.cxf.transport.servlet.CXFServlet.loadBus(CXFServlet.java:75)
I'll continue looking at it, but perhaps this war isn't meant to really deploy, but is more meant just for development of the plugin itself. however, if that is the case, it would still be better to work in TC because then we can leverage the code in our own projects with confidence.

How can a jenkins plugin get the value of a configuration setting?

I'm creating a Jenkins plugin which is a post-build action. I want the plugin to read the value of the "Root POM" field in the job configuration page. I've been looking through the Javadocs for hudson.model.AbstractBuild and trying getBuildVariables(), getEnvironment() etc. but I don't see anything relevant.
I guess as a last resort I could configure my plugin to prompt the user for the root pom, but the problem is that management wants a plugin that can be deployed automatically on every build without any action on the user's part.
Do you mean you want a plugin to read the configuration of another plugin (the maven one)? If so, I believe you should use something like
Jenkins.getInstance().getDescriptor(RequiredDesc.class);
Your required class might be hudson/maven/Maven3Builder depending on what you are trying to do.
Discussion
Update
I was wrong. This seems to work for me:
if (build instanceof hudson.maven.MavenModuleSetBuild) {
try {
hudson.maven.MavenModuleSetBuild b = (hudson.maven.MavenModuleSetBuild) build;
hudson.EnvVars envVars = b.getEnvironment(listener);
String rootPOM = b.getProject().getRootPOM(envVars);
listener.getLogger().println("rootPOM: " + rootPOM);
} catch (Exception e) {
listener.getLogger().println("ERROR: " + e.getMessage());
}
}

putting the appname in a codenarc report title

just started with the codenarc plugin for grails - seems to be great!
But now I try to configure a dynamic report title like this:
"code quality report for ${appName}"
Unfortunately, it seems that the appName property is not available at the right time - I just get a null value.
Any ideas?
PS: using Grails 2.0.4 with ":codenarc:0.19"
appName is by default bound in BuildConfig.groovy but is not available to the configuration closure for codenarc. I am yet to become cognizant of an absolute reasoning behind that behavior, unless anyone here throws some light on it. But you can very well read application.properties directly to get the appName as below:
codenarc.reports = {
def props = new Properties()
new File("application.properties").withInputStream {props.load(it)}
MyHtmlReport('html') {
outputFile = "${props['app.name']} - CodeNarc-Report.html"
title = "${props['app.name']} - Sample Report"
}
}

grails: guidance on writing scripts, esp for calling existing database-migration scripts

My requirement is to invoke some processing from a Jenkins build server, to determine whether the domain model has changed since the last build. I've come to the conclusion that the way forward is to write a script that will invoke a sequence of existing scripts from the db-migration plugin. Then I can invoke it in the step that calls test-app and war.
I've looked in the Grails doc, and at some of the db-migration scripts, and I find I'm stuck - have no idea where to start trying things. I'd be really grateful if someone could point me at any suitable sources. BTW, I'm a bit rusty in Grails. Started to teach myself two years ago via proof of concept project, which lasted 6 months. Then it was back to Eclipse rich client work. That might be part of my problem, though I never go involved in scripts.
One thing I need in the Jenkins evt is to get hold of the current SVN revision number being used for the build. Suggestions welcome.
Regards, John
Create a new script by running grails create-script scriptname. The database-migration plugins scripts are configured to be easily reused. There are is a lot of shared code in _DatabaseMigrationCommon.groovy and each script defines one target with a unique name. So you can import either the shared script or any standalone script (or multiple scripts) and call the targets like they're methods.
By default the script generated by create-script "imports" the _GrailsInit script via includeTargets << grailsScript("_GrailsInit") and you can do the same, taking advantage of the magic variables that point at installed plugins' directories:
includeTargets << new File("$databaseMigrationPluginDir/scripts/DbmGenerateChangelog.groovy")
If you do this you can remove the include of _GrailsInit since it's already included, but if you don't that's fine since Grails only includes files once.
Then you can define your target and call any of the plugin's targets. The targets cannot accept parameters, but you can add data to the argsMap (this is a map Grails creates from the parsed commandline arguments) to simulate user-specified args. Note that any args passed to your script will be seen by the database-migration plugin's scripts since they use the same argsMap.
Here's an example script that just does the same thing as dbm-generate-changelog but adds a before and after message:
includeTargets << new File("$databaseMigrationPluginDir/scripts/DbmGenerateChangelog.groovy")
target(foo: "Just calls dbmGenerateChangelog") {
println 'before'
dbmGenerateChangelog()
println 'after'
}
setDefaultTarget foo
Note that I renamed the target from main to foo so it's unique, in case you want to call this from another script.
As an example of working with args, here's a modified version that specifies a default changelog name if none is provided:
println 'before'
if (!argsMap.params) {
argsMap.params = ['foo2.groovy']
}
dbmGenerateChangelog()
println 'after'
Edit: Here's a fuller example that captures the output of dbm-gorm-diff to a string:
includeTargets << new File("$databaseMigrationPluginDir/scripts/_DatabaseMigrationCommon.groovy")
target(foo: "foo") {
depends dbmInit
def configuredSchema = config.grails.plugin.databasemigration.schema
String argSchema = argsMap.schema
String effectiveSchema = argSchema ?: configuredSchema ?: defaultSchema
def realDatabase
boolean add = false // booleanArg('add')
String filename = null // argsList[0]
try {
printMessage "Starting $hyphenatedScriptName"
ByteArrayOutputStream baos = new ByteArrayOutputStream()
def baosOut = new PrintStream(baos)
ScriptUtils.executeAndWrite filename, add, dsName, { PrintStream out ->
MigrationUtils.executeInSession(dsName) {
realDatabase = MigrationUtils.getDatabase(effectiveSchema, dsName)
def gormDatabase = ScriptUtils.createGormDatabase(dataSourceSuffix, config, appCtx, realDatabase, effectiveSchema)
ScriptUtils.createAndPrintFixedDiff(gormDatabase, realDatabase, realDatabase, appCtx, diffTypes, baosOut)
}
}
String xml = new String(baos.toString('UTF-8'))
def ChangelogXml2Groovy = classLoader.loadClass('grails.plugin.databasemigration.ChangelogXml2Groovy')
String groovy = ChangelogXml2Groovy.convert(xml)
// do something with the groovy or xml here
printMessage "Finished $hyphenatedScriptName"
}
catch (e) {
ScriptUtils.printStackTrace e
exit 1
}
finally {
ScriptUtils.closeConnection realDatabase
}
}
setDefaultTarget foo

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