Command sent to docker container shell exec failed - docker

I am launching a container to issue some command on the host machine files.
This is done via a shell script:
echo "--- Starting container"
container_id=$(docker run -d -it --mount type=bind,source="$mount_path",target=/usr/share --name project-test python:3.5.2-alpine)
docker exec $container_id /bin/sh -c "cd /usr/share && pwd && ls -l"
However this throws an error that I do not understand how to fix:
OCI runtime exec failed: exec failed: container_linux.go:367: starting
container process caused: exec: "C:/Program Files/Git/usr/bin/sh":
stat C:/Program Files/Git/usr/bin/sh: no such file or directory:
unknown
My host machine is a windows 10. From my little understanding, the exec command on the container should opperate inside the container. But the error shows path from my host machine. Why is that ? How to properly send a command to a docker container ?
Edit:
The logs of the container after the docker exec are:
Python 3.5.2 (default, Dec 27 2016, 21:33:11)
[GCC 5.3.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
Edit: result of the command issued manually (expected result)
/ # cd /usr/share && pwd && ls -l
/usr/share
total 5
-rwxr-xr-x 1 root root 347 May 20 06:31 README.md
drwxrwxrwx 1 root root 4096 May 20 08:22 myproject
docker exec $container_id ls -l /usr/share
ls: C:/Program Files/Git/usr/share: No such file or directory

Your acquisition of container_id is maybe wrong. Ensure the value is correctly set in this variable before continuing.
Just a note before: you're using -d and -it options simultaneously. The -it is ignored since you tell the container to run as a daemon, you won't attach your TTY to it. The -it options are totally ignored here.
When you exec into a container, it runs a new session in the container. It means you won't see the result of the command you give in the logs since it's in the output of the new session.
To get access to the logs, you must use -it options when using exec. If you refer to #nish8690 on the question Docker exec in docker windows, you'll need to double your slashes in the command:
instead of
docker exec -it [containerid] /bin/sh
try to use
docker exec -it [containerid] //bin//sh
-- #nish8690, Docker exec in docker windows
Resulting maybe in:
docker exec -it $container_id //bin//sh -c "cd /usr/share && pwd && ls -l"

While using docker from a Windows host, the slash is converted to windows slash so the git is confusing.
To access a docker machine from a Windows host, you most to override the windows slash format by using double slash instead.
an example how to run a file, instead of running /run.sh you need to run //run.sh.
This solution will solve your problem.

Related

Got struck in docker run command in windows [duplicate]

Description
I am using Docker version 1.12.5 on Windows 10 via Hyper-V and want to use container executables as commands in the current path. I built a Docker image that is running fine, but I have a problem to mount the current path. The idea is to create an alias and do a docker run --rm [...] command so that it could be used system-wide in the current directory.
Setup
I have a drive E with a folder "test" and in there a folder called "folder on windows host" to show that the command is working. The Dockerfile create the directory /data, defines it as VOLUME and WORKDIR.
Having E:\test as the current directory in PowerShell and executing the Docker command with an absolute path, I can see the content of E:\test:
PS E:\test> docker run --rm -it -v E:\test:/data mirkohaaser/docker-clitools ls -la
total 0
drwxr-xr-x 2 root root 0 Jan 4 11:45 .
drwxr-xr-x 2 root root 0 Jan 5 12:17 folder on windows host
Problem
I want to use the current directory and not an absolute notation. I could not use pwd in the volume because of different error messages:
Trying with ($pwd)
PS E:\test> docker run --rm -it -v ($pwd):/data mirkohaaser/docker-clitools ls -la
C:\Program Files\Docker\Docker\Resources\bin\docker.exe: Error parsing reference: ":/data" is not a valid repository/tag.
See 'C:\Program Files\Docker\Docker\Resources\bin\docker.exe run --help'.
Trying with /($pwd)
PS E:\test> docker run --rm -it -v /($pwd):/data mirkohaaser/docker-clitools ls -la
C:\Program Files\Docker\Docker\Resources\bin\docker.exe: Error parsing reference: "E:\\test" is not a valid repository/tag.
See 'C:\Program Files\Docker\Docker\Resources\bin\docker.exe run --help'.
Trying with \´pwd\´
PS E:\test> docker run --rm -it -v ´$pwd´:/data mirkohaaser/docker-clitools ls -la
C:\Program Files\Docker\Docker\Resources\bin\docker.exe: Error response from daemon: Invalid bind mount spec "´E:\\test´:/data": invalid mode: /data.
See 'C:\Program Files\Docker\Docker\Resources\bin\docker.exe run --help'.
Trying with `pwd`
PS E:\test> docker run --rm -it -v `$pwd`:/data mirkohaaser/docker-clitools ls -la
C:\Program Files\Docker\Docker\Resources\bin\docker.exe: Error response from daemon: create $pwd: "$pwd" includes invalid characters for a local volume name, only "[a-zA-Z0-9][a-zA-Z0-9_.-]" are allowed.
See 'C:\Program Files\Docker\Docker\Resources\bin\docker.exe run --help'.
What is the correct syntax of mounting the current directory as a volume in Docker on Windows 10?
In Windows Command Line (cmd), you can mount the current directory like so:
docker run --rm -it -v %cd%:/usr/src/project gcc:4.9
In PowerShell, you use ${PWD}, which gives you the current directory:
docker run --rm -it -v ${PWD}:/usr/src/project gcc:4.9
On Linux:
docker run --rm -it -v $(pwd):/usr/src/project gcc:4.9
Cross Platform
The following options will work on both PowerShell and on Linux (at least Ubuntu):
docker run --rm -it -v ${PWD}:/usr/src/project gcc:4.9
docker run --rm -it -v $(pwd):/usr/src/project gcc:4.9
This works for me in PowerShell:
docker run --rm -v ${PWD}:/data alpine ls /data
Command prompt (Cmd.exe)
When the Docker CLI is used from the Windows Cmd.exe, use %cd% to mount the current directory:
echo test > test.txt
docker run --rm -v %cd%:/data busybox ls -ls /data/test.txt
Git Bash (MinGW)
When the Docker CLI is used from the Git Bash (MinGW), mounting the current directory may fail due to a POSIX path conversion: Docker mounted volume adds ;C to end of windows path when translating from linux style path.
Escape the POSIX paths by prefixing with /
To skip the path conversion, POSIX paths have to be prefixed with the slash (/) to have leading double slash (//), including /$(pwd)
touch test.txt
docker run --rm -v /$(pwd):/data busybox ls -la //data/test.txt
Disable the path conversion
Disable the POSIX path conversion in Git Bash (MinGW) by setting MSYS_NO_PATHCONV=1 environment variable at the command level
touch test.txt
MSYS_NO_PATHCONV=1 docker run --rm -v $(pwd):/data busybox ls -la /data/test.txt
or shell (system) level
export MSYS_NO_PATHCONV=1
touch test.txt
docker run --rm -v $(pwd):/data busybox ls -la /data/test.txt
Open Settings on Docker Desktop (Docker for Windows).
Select Shared Drives.
Select the drive that you want to use inside your containers (e.g., C).
Click Apply. You may be asked to provide user credentials.
The command below should now work on PowerShell (command prompt does not support ${PWD}):
docker run --rm -v ${PWD}:/data alpine ls /data
IMPORTANT: if/when you change your Windows domain password, the mount will stop working silently, that is, -v will work but the container will not see your host folders and files. Solution: go back to Settings, uncheck the shared drives, Apply, check them again, Apply, and enter the new password when prompted.
For Git Bash for Windows (in ConEmu), the following works for me (for Docker Windows containers):
docker run --rm -it -v `pwd -W`:c:/api microsoft/dotnet:2-runtime
Note the backticks/backquotes around pwd -W!
With all other variations of PWD I've tried I've received: "Error response from daemon: invalid volume specification: ..."
Update:
The above was for Docker Windows containers, for Linux containers use:
docker run --rm -it -v `pwd -W`:/api -p 8080:80 microsoft/aspnetcore:2
Here is mine which is compatible for both Win10 docker-ce & Win7 docker-toolbox. At las at the time I'm writing this :).
You can notice I prefer use /host_mnt/c instead of c:/ because I sometimes encountered trouble on docker-ce Win 10 with c:/
$WIN_PATH=Convert-Path .
#Convert for docker mount to be OK on Windows10 and Windows 7 Powershell
#Exact conversion is : remove the ":" symbol, replace all "\" by "/", remove last "/" and minor case only the disk letter
#Then for Windows10, add a /host_mnt/" at the begin of string => this way : c:\Users is translated to /host_mnt/c/Users
#For Windows7, add "//" => c:\Users is translated to //c/Users
$MOUNT_PATH=(($WIN_PATH -replace "\\","/") -replace ":","").Trim("/")
[regex]$regex='^[a-zA-Z]/'
$MOUNT_PATH=$regex.Replace($MOUNT_PATH, {$args[0].Value.ToLower()})
#Win 10
if ([Environment]::OSVersion.Version -ge (new-object 'Version' 10,0)) {
$MOUNT_PATH="/host_mnt/$MOUNT_PATH"
}
elseif ([Environment]::OSVersion.Version -ge (new-object 'Version' 6,1)) {
$MOUNT_PATH="//$MOUNT_PATH"
}
docker run -it -v "${MOUNT_PATH}:/tmp/test" busybox ls /tmp/test
Other solutions for Git Bash provided by others didn't work for me. Apparently there is currently a bug/limitation in Git for Windows. See this and this.
I finally managed to get it working after finding this GitHub thread (which provides some additional solutions if you're interested, which might work for you, but didn't for me).
I ended up using the following syntax:
MSYS_NO_PATHCONV=1 docker run --rm -it -v $(pwd):/usr/src/project gcc:4.9
Note the MSYS_NO_PATHCONV=1 in front of the docker command and $(pwd) - round brackets, lower-case pwd, no quotes, no backslashes.
Also, I'm using Linux containers on Windows if that matters..
I tested this in the new Windows Terminal, ConEmu and GitBash, and all of them worked for me.
This command should fix it.
docker run --rm -it -v ${PWD}:c:\data mirkohaaser/docker-clitools
{PWD} is the host current folder. after the : is the container folder.
If the mounting is correct then files will be listed in the director c:\data in the container.
You need to swap all the back slashes to forward slashes
so change
docker -v C:\my\folder:/mountlocation ...
to
docker -v C:/my/folder:/mountlocation ...
I normally call docker from a cmd script where I want the folder to mount to be relative to the script i'm calling so in that script I do this...
SETLOCAL
REM capture the path to this file so we can call on relative scrips
REM without having to be in this dir to do it.
REM capture the path to $0 ie this script
set mypath=%~dp0
REM strip last char
set PREFIXPATH=%mypath:~0,-1%
echo "PREFIXPATH=%PREFIXPATH%"
mkdir -p %PREFIXPATH%\my\folder\to\mount
REM swap \ for / in the path
REM because docker likes it that way in volume mounting
set PPATH=%PREFIXPATH:\=/%
echo "PPATH=%PPATH%"
REM pass all args to this script to the docker command line with %*
docker run --name mycontainername --rm -v %PPATH%/my/folder/to/mount:/some/mountpoint myimage %*
ENDLOCAL
If you are still having this issue in 2022, you can install docker in windows with WSL(Windows Subsystem for Linux). Then you can go on Microsoft Store and install one of the Linux project like Ubuntu, Debian or Kali Linux.
On Docker Desktop go to setting -> WSL integration
and enable your version of Linux.
On VS Code open new WSL terminal and execute the Linux command there.
If you want to pass your project directory with the DockerfileRunArguments property to your debug container, then pwd won't work.
<PropertyGroup>
<!-- Will result in `` -->
<DockerfileRunArguments>-v "$(pwd):/data:ro"</DockerfileRunArguments>
</PropertyGroup>
Use $(MSBuildProjectDirectory) instead of $(pwd)
<PropertyGroup>
<!-- Will result in the full path to your project directory -->
<DockerfileRunArguments>-v "$(MSBuildProjectDirectory):/data:ro"</DockerfileRunArguments>
</PropertyGroup>
Reference: MSDocs - Visual Studio Container Tools
PowerShell on Windows 10 Pro
The above solutions did not work for me as plain pwd gives a description in the response:
Path
----
C:\Users\barnaby
It needs outputting as a variable in the script $(pwd) but then docker complains invalid reference format
The solution is to wrap the whole switch parameters in double quotes and this works for me:
docker run --rm -v "$(pwd):/app" php:7.4-cli php /app/hello.php
docker run --rm -v /c/Users/Christian/manager/bin:/app --workdir=/app php:7.2-cli php app.php
Git bash
cd /c/Users/Christian/manager
docker run --rm -v ${PWD}:/app --workdir=/app php:7.2-cli php bin/app.php
echo ${PWD}
result:
/c/Users/Christian/manager
cmd or PowerShell
cd C:\Users\Christian\manager
echo ${PWD}
result:
Path
---- C:\Users\Christian\manager
as we see in cmd or PowerShell $ {PWD} will not work

Change selected directory at startup of docker container

Is it possible to save the selected directory in docker before exiting the container?
As a default, docker does not remember the selected directory before it exits.
In the example below, I changed the directory inside docker to home.
Example:
> docker exec -it loving_mccarthy /bin/bash
root#6bd70522dd17:/# cd /home
root#6bd70522dd17:/home# exit
exit
> docker exec -it loving_mccarthy /bin/bash
/#
You can achieve this behavior by setting up a bash function, which you can configure to run on terminal exit, that writes the current working directory to the .bashrc file, which you can then use the second time you run a bash terminal in the container with cd -.
Here's a full example:
Start the container:
$ docker run -it --name=example -d ubuntu /bin/bash
Run docker exec the first time, and configure the function for trap:
$ docker exec -it example /bin/bash
root#ecfc612fe6b8:/# set_workdir_on_exit() { echo "export OLDPWD=$PWD" >> $HOME/.bashrc ;}
root#ecfc612fe6b8:/# trap 'set_workdir_on_exit' EXIT
root#ecfc612fe6b8:/# cd /home
root#ecfc612fe6b8:/home# exit
Run docker exec the second time:
$ docker exec -it example /bin/bash
root#6a491ad1aee5:/# cd -
/home
root#6a491ad1aee5:/home#

How to pass a command to a docker container with PowerShell?

I would like to send a command to an already existing docker container.
I am forced to do it via powershell or CMD, git bash not giving the correct Windows path using pwd.
Functionnal example
$cur_path = $pwd.Path
$container_id = docker run -it -d --volume $cur_path\:/matmuttools saagie/python:3.5.2-1.3.1-centos
docker exec $container_id 'ls'
docker stop $container_id
docker rm $container_id
Gives the following output:
anaconda-post.log
bin
dev
etc
git-credential-manager-2.0.4.jar
home
lib
lib64
lost+found
matmuttools
media
mnt
opt
proc
root
run
sbin
srv
sys
tmp
usr
var
Non functionnal example
However, when doing something more "complex", docker throws an error:
$cur_path = $pwd.Path
$container_id = docker run -it -d --volume $cur_path\:/matmuttools saagie/python:3.5.2-1.3.1-centos
docker exec $container_id 'ls /matmuttools'
docker stop $container_id
docker rm $container_id
Throws the following error:
OCI runtime exec failed: exec failed: container_linux.go:367: starting
container process caused: exec: "ls /matmuttools": stat ls
/matmuttools: no such file or directory: unknown
If I pass ls without quotes and without more argument (just ls), it runs in the container. If I pass ls without quotes and with arguments, it runs on the host.
Runs in the container:
docker exec $container_id ls
Runs on the host:
docker exec $container_id ls /
How do I properly send a command to execute to a docker container in powershell (or with CMD) ?
In git bash, to get the actual windows path, use:
pwd -W
Now that I do not need powershell anymore (I am pretty sure it was not a blocking thing, but anyway):
docker exec -it frosty_lamport bash -c "cd /matmuttools; ls"

Become root in a docker container

I installed Oracle Database in a Docker container, but can't figure out how to become root. If I to this from the host
sudo docker exec -it -u 0 oracle18se /bin/bash
or
sudo docker exec -it --user root oracle18se /bin/bash
I get
OCI runtime exec failed: exec failed: container_linux.go:345: starting container process caused "chdir to cwd (\"/home/oracle\") set in config.json failed: permission denied": unknown
If I do
sudo docker exec -it oracle18se /bin/bash
from the host, and then
su -
from the container, it asks the root password, but I do not know it.
Hy host OS is Ubuntu 18.04, link to docker file
EDIT1:
Found a Docker bug.
You can exec into an existing container
docker exec -u root -it <container-id> /bin/bash
Output (as seen in Terminal):
root#<container-id>:/#
And to set root password use this:
Type the following command to become root user and issue passwd:
sudo -i
passwd
OR set a password for root user in a single go:
sudo passwd root
Test it your root password by typing the following command:
su -
You can connect as root in docker container using:
docker exec -u 0 -it <container_id> /bin/bash
The workaround is
sudo docker exec -u 0 -it --workdir / oracle12se /bin/bash

OCI runtime exec failed: exec failed: (...) executable file not found in $PATH": unknown

I have dockerized an app which has ffmpeg installed in it via libav-tools. The app launches without problem, yet the problem occured when fluent-ffmpeg npm module tried to execute ffmpeg command, which was not found. When I wanted to check the version of the ffmpeg and the linux distro set up in the image, I used sudo docker exec -it c44f29d30753 "lsb_release -a" command, but it gave the following error: OCI runtime exec failed: exec failed: container_linux.go:296: starting container process caused "exec: \"lsb_release -a\": executable file not found in $PATH": unknown
Then I realized that it gives me the same error with all the commands that I try to run inside the image or the container.
OCI runtime exec failed: exec failed: container_linux.go:296: starting container process caused "exec: \"ffmpeg -a\": executable file not found in $PATH": unknown
This is my Dockerfile:
FROM ubuntu:xenial
FROM node
RUN apt-get -y update
RUN apt-get --yes install libav-tools
RUN mkdir -p /usr/src/app
WORKDIR /usr/src/app
COPY package.json /usr/src/app
RUN npm install
COPY . /usr/src/app
RUN npm run build
ENV NODE_ENV production
EXPOSE 8000
CMD ["npm", "run", "start:prod"]
I would kindly ask for your help. Thank you very much!
This happened to me on windows. See below for any of the commands that match your case.
NOTE
You will need to run the commands that match your case below using the correct shell in your container i.e. /bin/bash or /bin/sh. Using sh instead of bash or vice versa will also give you this error. So, confirm that you are using the right shell, or just try both shells and see the one that works.
For these examples, I will be using sh
On Windows CMD (not switching to bash):
docker exec -it <container-id> /bin/sh
On Windows CMD (after switching to bash):
docker exec -it <container-id> //bin//sh
or
winpty docker exec -it <container-id> //bin//sh
On Git Bash:
winpty docker exec -it <container-id> //bin//sh
For Windows users, the reason is documented in the ReleaseNotes file of Git and it is well explained here - Bash in Git for Windows: Weirdness... :
The cause is to do with trying to ensure that posix paths end up being
passed to the git utilities properly. For this reason, Git for Windows
includes a modified MSYS layer that affects command arguments.
Linux
docker exec -it <container-id> /bin/sh
docker exec -it <containerId> sh
I had this due to a simple ordering mistake on my end. I called
[WRONG] docker run <image> <arguments> <command>
When I should have used
docker run <arguments> <image> <command>
Same resolution on similar question: https://stackoverflow.com/a/50762266/6278
If #papigee does solution doesn't work, maybe you don't have the permissions.
I tried #papigee solution but does't work without sudo.
I did :
sudo docker exec -it <container id or name> /bin/sh
Get rid of your quotes around your command. When you quote it, docker tries to run the full string "lsb_release -a" as a command, which doesn't exist. Instead, you want to run the command lsb_release with an argument -a, and no quotes.
sudo docker exec -it c44f29d30753 lsb_release -a
Note, everything after the container name is the command and arguments to run inside the container, docker will not process any of that as options to the docker command.
For others with this error, the debugging steps I'd recommend:
Verify the order of your arguments. Everything after the container name/id is a command to run. So you don't want docker exec $cid -it /bin/sh because that will try to run the command -it in the $cid container. Instead you want docker exec -it $cid /bin/sh
Look at the command that is failing, everything in the quotes after the exec error (e.g. lsb_release -a in "exec: \"lsb_release -a\") is the binary trying to be run. Make sure that binary exists in your image. E.g. if you are using alpine or busybox, bash may not exist, but /bin/sh does. And that binary is the full string, e.g. you would be able to run something like ls "/usr/bin/lsb_release -a" and see a file with the space and -a in the filename.
If you're using Windows with Git bash and see a long path prefixed on that command trying to be run, that's Git bash trying to do some automatic conversions of /path/to/binary, you can disable that by doubling the first slash, e.g. //bin/sh.
If the command you're running is a script in the container, check the first line of that script, containing the #!/path/to/interpreter, make sure that interpreter exists in the image, at that path, and that the script is saved with linux linefeeds (lf, not cr+lf, you won't want the \r showing in the file when read in linux because that becomes part of the command it's looking to execute).
If you don't have a full path to the binary in the command you're running, check the value of $PATH in the image, and verify the binary exists within one of those directories. E.g. you can docker exec -it $cid /bin/sh and echo $PATH and type some_command to verify some_command is found in your path.
If your command is not an executable, but rather a shell builtin, you'll need to execute it with a shell instead of directly. That can be done with docker exec -it $cid /bin/sh -c "your_shell_builtin"
I solved this with this commands:
Run the container:
docker run -d <image-name>
List containers:
docker ps -a
Use the container ID:
docker exec -it <container-id> /bin/sh
I was running into this issue and it turned out that I needed to do this:
docker run ${image_name} bash -c "${command}"
You can use another shell to execute the same command:
Error I get when i execute:
[jenkins#localhost jenkins_data]$ docker exec -it mysqldb \bin\bash
OCI runtime exec failed: exec failed: container_linux.go:345: starting container process caused "exec: \"binsh\": executable file not found in $PATH": unknown
Solution:
When I execute it with below command, using bash shell it works:
[jenkins#localhost jenkins_data]$ docker exec -it mysqldb bash
root#<container-ID>:/#
What I did to solve was simply:
Run docker ps -a
Check for the command of the container (mine started with /bin/sh)
Run docker-compose exec < name_of_service > /bin/sh (if that is what started your command
This is for solving when using docker compose
I was running a container in a docker-compose.
entrypoint:
- ls
worked, but
entrypoint:
- ls tests
did not.
It's because the arguments have to be on separate lines.. 🤦‍♂
entrypoint:
- ls
- tests
This has happened to me. My issue was caused when I didn't mount Docker file system correctly, so I configured the Disk Image Location and re-bind File sharing mount, and this now worked correctly.
For reference, I use Docker Desktop in Windows.
In my case i saved the docker image and instead of load-ing it on the other machine i imported it which are very different and lead me to an error similar to this.
you have to run like below:
docker exec sh -c 'echo "$ENV_NAME"'
I had windows line endings in a shell script. change to LF dos2unix
If you got this error when using the docker run command, you may have made a simple syntax error.
Example
Incorrect:
docker run myimage -p 3838:3838
docker: Error response from daemon: failed to create shim: OCI runtime create
failed: container_linux.go:380: starting container process caused:
exec: "-p": executable file not found in $PATH: unknown.
ERRO[0000] error waiting for container: context canceled
Correct (options go before image name):
docker run -p 3838:3838 myimage

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