UBUNTU 20.04
bazel 3.0.0- (#non-git)
openjdk 11.0.8 2020-07-14
Actually, the error itself:
dmitry#dmitry-pc:~/mediapipe$ bazel build -c opt --define MEDIAPIPE_DISABLE_GPU=1 mediapipe/examples/desktop/hand_tracking:hand_tracking_cpu
Starting local Bazel server and connecting to it...
INFO: SHA256 (https://github.com/bazelbuild/rules_foreign_cc/archive/master.zip) = f358144776d3dfc5a928ef32a0e4fbe93c99b55772d70cca77a6478e34d96aa7
DEBUG: Rule 'rules_foreign_cc' indicated that a canonical reproducible form can be obtained by modifying arguments sha256 = "f358144776d3dfc5a928ef32a0e4fbe93c99b55772d70cca77a6478e34d96aa7"
DEBUG: Call stack for the definition of repository 'rules_foreign_cc' which is a http_archive (rule definition at /home/dmitry/.cache/bazel/_bazel_dmitry/870728c32b519bd8ea9ab1059ef39614/external/bazel_tools/tools/build_defs/repo/http.bzl:296:16):
- <builtin>
- /home/dmitry/mediapipe/WORKSPACE:39:1
INFO: SHA256 (https://github.com/bazelbuild/rules_cc/archive/master.zip) = d1d266f0ee34a413af9e70b27354faddc2f300d873bcc388508901121e08aff4
DEBUG: Rule 'rules_cc' indicated that a canonical reproducible form can be obtained by modifying arguments sha256 = "d1d266f0ee34a413af9e70b27354faddc2f300d873bcc388508901121e08aff4"
DEBUG: Call stack for the definition of repository 'rules_cc' which is a http_archive (rule definition at /home/dmitry/.cache/bazel/_bazel_dmitry/870728c32b519bd8ea9ab1059ef39614/external/bazel_tools/tools/build_defs/repo/http.bzl:296:16):
- <builtin>
- /home/dmitry/mediapipe/WORKSPACE:33:1
ERROR: /home/dmitry/.cache/bazel/_bazel_dmitry/870728c32b519bd8ea9ab1059ef39614/external/rules_cc/cc/private/rules_impl/cc_flags_supplier.bzl:28:21: rule() got unexpected keyword argument 'incompatible_use_toolchain_transition'
ERROR: While resolving toolchains for target //mediapipe/examples/desktop/hand_tracking:hand_tracking_cpu: com.google.devtools.build.lib.packages.BuildFileContainsErrorsException: error loading package '#bazel_tools//tools/cpp': in /home/dmitry/.cache/bazel/_bazel_dmitry/870728c32b519bd8ea9ab1059ef39614/external/rules_cc/cc/defs.bzl: Extension file 'cc/private/rules_impl/cc_flags_supplier.bzl' has errors
ERROR: Analysis of target '//mediapipe/examples/desktop/hand_tracking:hand_tracking_cpu' failed; build aborted: com.google.devtools.build.lib.packages.BuildFileContainsErrorsException: error loading package '#bazel_tools//tools/cpp': in /home/dmitry/.cache/bazel/_bazel_dmitry/870728c32b519bd8ea9ab1059ef39614/external/rules_cc/cc/defs.bzl: Extension file 'cc/private/rules_impl/cc_flags_supplier.bzl' has errors
INFO: Elapsed time: 12,845s
INFO: 0 processes.
FAILED: Build did NOT complete successfully (2 packages loaded, 0 targe\
ts configured)
I came across the same error and the option incompatible_use_toolchain_transition doesn't seem to be supported in bazel version 3.0.0.
Try updating your bazel following their manual.
On more thing, the latest 3.5 version of bazel seem to have another issue. So consider getting 3.4 version or apply the workaround in the Github issue.
Related
I'm trying to test the build of google/or-tools using the Bazel based build system on various GNU/Linux distro by using various common distros
When trying to use bazel inside an Alpine:edge based Dockerfile (i.e. in a RUN cmd), at "docker build" time.
I don't have a consistency build between my Archlinux and on Github action workflow runners (ubuntu 18.04 IIRC).
Dockerfile: https://github.com/google/or-tools/blob/master/bazel/docker/alpine/Dockerfile
I run it using my Makefile target alpine_build in google/or-tools/bazel
ref: https://github.com/google/or-tools/blob/master/bazel/Makefile
From GH ubuntu-latest (18.04 LTS ?) runner, I got this trace
$ make alpine_build
...
Step 11/11 : RUN bazel build --curses=no --copt='-Wno-sign-compare' //...:all
---> Running in 9a2f9b6f24c7
Extracting Bazel installation...
Starting local Bazel server and connecting to it...
Loading:
Loading: 0 packages loaded
Loading: 0 packages loaded
Loading: 0 packages loaded
DEBUG: Rule 'com_google_protobuf' indicated that a canonical reproducible form can be obtained by modifying arguments commit = "fe1790ca0df67173702f70d5646b82f48f412b99", shallow_since = "1576187991 -0800"
DEBUG: Call stack for the definition of repository 'com_google_protobuf' which is a git_repository (rule definition at /root/.cache/bazel/_bazel_root/86fee77ec27da0053940f3f327a6fd59/external/bazel_tools/tools/build_defs/repo/git.bzl:195:18):
- /home/lib/WORKSPACE:22:1
Loading: 2 packages loaded
Analyzing: 301 targets (16 packages loaded, 0 targets configured)
Analyzing: 301 targets (25 packages loaded, 43 targets configured)
Analyzing: 301 targets (26 packages loaded, 43 targets configured)
...
ref: https://github.com/google/or-tools/runs/568849544?check_suite_focus=true
So everything seems fine up to this point (still need to figure out the jdk javac issue but it's an other topic)
On the contrary on my Archlinux, I've got:
$ make alpine_build
...
Step 11/11 : RUN bazel build --curses=no --copt='-Wno-sign-compare' //...:all
---> Running in e13ca9fd3e84
Extracting Bazel installation...
Starting local Bazel server and connecting to it...
Loading:
Loading: 0 packages loaded
Loading: 0 packages loaded
Loading: 0 packages loaded
INFO: Call stack for the definition of repository 'com_google_protobuf' which is a git_repository (rule definition at /root/.cache/bazel/_bazel_root/86fee77ec27da0053940f3f327a6fd59/external/bazel_tools/tools/build_defs/repo/git.bzl:195:18):
- /home/lib/WORKSPACE:22:1
ERROR: An error occurred during the fetch of repository 'com_google_protobuf':
java.io.IOException: unlinkat(/root/.cache/bazel/_bazel_root/86fee77ec27da0053940f3f327a6fd59/external/com_google_protobuf/.git/logs/refs/remotes/origin) (Directory not empty)
ERROR: no such package '#com_google_protobuf//': java.io.IOException: unlinkat(/root/.cache/bazel/_bazel_root/86fee77ec27da0053940f3f327a6fd59/external/com_google_protobuf/.git/logs/refs/remotes/origin) (Directory not empty)
ERROR: no such package '#com_google_protobuf//': java.io.IOException: unlinkat(/root/.cache/bazel/_bazel_root/86fee77ec27da0053940f3f327a6fd59/external/com_google_protobuf/.git/logs/refs/remotes/origin) (Directory not empty)
INFO: Elapsed time: 29.713s
INFO: 0 processes.
FAILED: Build did NOT complete successfully (0 packages loaded)
FAILED: Build did NOT complete successfully (0 packages loaded)
The command '/bin/sh -c bazel build --curses=no --copt='-Wno-sign-compare' //...:all' returned a non-zero code: 1
make: *** [Makefile:121: alpine_build] Error 1
I've tried to look at the file /root/.cache/bazel/_bazel_root/86fee77ec27da0053940f3f327a6fd59/external/com_google_protobuf/.git/logs/refs/remotes/origin
using the previous step (alpine_devel) container:
$ make sh_alpine_devel
/home/lib # bazel build --curses=no --copt='-Wno-sign-compare' //...:all
Extracting Bazel installation...
Starting local Bazel server and connecting to it...
Loading:
Loading: 0 packages loaded
Loading: 0 packages loaded
Loading: 0 packages loaded
INFO: Call stack for the definition of repository 'com_google_protobuf' which is a git_repository (rule definition at /root/.cache/bazel/_bazel_root/86fee77ec27da0053940f3f327a6fd59/external/bazel_tools/tools/build_defs/repo/git.bzl:195:18):
- /home/lib/WORKSPACE:22:1
ERROR: An error occurred during the fetch of repository 'com_google_protobuf':
java.io.IOException: unlinkat(/root/.cache/bazel/_bazel_root/86fee77ec27da0053940f3f327a6fd59/external/com_google_protobuf/.git/logs/refs/remotes/origin) (Directory not empty)
ERROR: no such package '#com_google_protobuf//': java.io.IOException: unlinkat(/root/.cache/bazel/_bazel_root/86fee77ec27da0053940f3f327a6fd59/external/com_google_protobuf/.git/logs/refs/remotes/origin) (Directory not empty)
ERROR: no such package '#com_google_protobuf//': java.io.IOException: unlinkat(/root/.cache/bazel/_bazel_root/86fee77ec27da0053940f3f327a6fd59/external/com_google_protobuf/.git/logs/refs/remotes/origin) (Directory not empty)
INFO: Elapsed time: 29.924s
INFO: 0 processes.
FAILED: Build did NOT complete successfully (0 packages loaded)
FAILED: Build did NOT complete successfully (0 packages loaded)
cat /root/.cache/bazel/_bazel_root/86fee77ec27da0053940f3f327a6fd59/external/com_google_protobuf/.git/logs/
refs/remotes/origin/revert-6272-MutableSequence-import
0000000000000000000000000000000000000000 c5fedd61a48a174054f98684d5ddbc2d11530367 root <root#Flex2.home> 1586336706 +0000 fetch origin refs/heads/*:refs/remotes/origin/* refs/tags/*:refs/tags/*: storing head
note Flex2 is my local machine...
So my questions:
Is it a known issue (ed don't find anything on java.io.IOException: unlinkat) ?
Does Bazel deal with the kernel (or uname -a etc...) which could explain why I don't have the same behaviour from one host to an other ?
May I have more trace to debug this issue ?
How can I fix it ?
Thanks,
Basically you need to tell to bazel to use the java locally installed by alpine than downloading one.
this can be done using the option --host_javabase=#local_jdk//:jdk
ref: https://github.com/google/or-tools/blob/2cb85b4eead4c38e1c54b48044f92087cf165bce/bazel/docker/alpine/Dockerfile#L26
Minimal working example:
https://github.com/Mizux/bazel-cpp/blob/main/ci/docker/alpine/Dockerfile
I am getting this error when trying to compile on drake macos 10.14.6. I have ran the setup script.
Bazel: 2.0.0
Drake 0.11.0
lawn-143-215-113-3:drake tdogb$ bazel build //...
INFO: Call stack for the definition of repository 'cc' which is a cc_repository (rule definition at /Users/tdogb/drake/tools/workspace/cc/repository.bzl:147:1
7):
- /Users/tdogb/drake/tools/workspace/default.bzl:110:9
- /Users/tdogb/drake/WORKSPACE:10:1
ERROR: An error occurred during the fetch of repository 'cc':
attribute : Could NOT identify C/C++ compiler because compilation failed.
ERROR: no such package '#cc//': attribute : Could NOT identify C/C++ compiler because compilation failed.
INFO: Elapsed time: 0.221s
INFO: 0 processes.
FAILED: Build did NOT complete successfully (0 packages loaded)
currently loading: attic/util ... (145 packages)
lawn-143-215-113-3:drake tdogb$
From the https://drake.mit.edu/release_notes/release_notes.html list of dependencies over time, Drake 0.11.0 is probably not compatible with Bazel 2.0.0. Try Bazel 1.1.0 or 1.0.0 instead.
I follow https://www.tensorflow.org/xla/tfcompile, and fail at step 2.
What's wrong?
cschen
~/git/tensorflow$ bazel build --config=opt //t1:test_graph_tfmatmul
... INFO: Found applicable config definition build:download_clang in
file /home/cschen/git/tensorflow/.bazelrc:
--crosstool_top=#local_config_download_clang//:toolchain --define=using_clang=true --action_env TF_DOWNLOAD_CLANG=1 INFO: Found applicable config definition build:opt in file
/home/cschen/git/tensorflow/.tf_configure.bazelrc:
--copt=-march=native --copt=-Wno-sign-compare --host_copt=-march=native --define with_default_optimizations=true INFO: Build option --cpu has changed, discarding analysis cache.
ERROR: Analysis of target '//t1:test_graph_tfmatmul' failed; build
aborted: no such package 'tools/target_cpu': BUILD file not found on
package path ...
I copy to t1/BUILD from step 2 as follows,
~/git/tensorflow$ cat t1/BUILD
load("//tensorflow/compiler/aot:tfcompile.bzl", "tf_library") ...
The expected result is to generate header file test_graph_tfmatmul.h.
I don't know which version you are using, but on TF1.14, if you git grep tools/target_cpu, you will see one result in the file tensorflow/compiler/aot/tfcompile.bzl.
In the directory tools, there is nothing reminiscent of target_cpu, so I think it must be a bug with the tfcompile.bzl. The problem disappears for me when I comment out the line referencing tools/target_cpu.
I'd like to use bazel in a locked-down environment, one without uncontrolled internet access. I'd like to force bazel to use the locally installed java, instead of downloading one. I could not figure out the required combination of flags - this is what I tried:
$ java -version
java version "1.8.0_171"
Java(TM) SE Runtime Environment (build 1.8.0_171-b11)
Java HotSpot(TM) 64-Bit Server VM (build 25.171-b11, mixed mode)
$ javac -version
javac 1.8.0_171
$ bazel clean --expunge
$ bazel info release
release 0.24.1
$ bazel build //hello
# This builds a 'hello world' cpp file.
# This rule also downloads some rules, would be nice to avoid it as
INFO: Build completed successfully, 6 total actions well
$ bazel test --nofetch //hello:hello_test
ERROR: /home/erenon/.cache/bazel/_bazel_erenon/afacf41c7e3fc3f4ea7510d344b4de38/external/bazel_tools/tools/jdk/BUILD:218:1: no such package '#remote_java_tools//': to fix, run
bazel fetch //...
External repository #remote_java_tools not found and fetching repositories is disabled. and referenced by '#bazel_tools//tools/jdk:JacocoCoverageRunner'
ERROR: Analysis of target '//hello:hello_test' failed; build aborted: no such package '#remote_java_tools//': to fix, run
bazel fetch //...
External repository #remote_java_tools not found and fetching repositories is disabled.
INFO: Elapsed time: 0.160s
INFO: 0 processes.
FAILED: Build did NOT complete successfully (3 packages loaded, 27 targets configured)
FAILED: Build did NOT complete successfully (3 packages loaded, 27 targets configured)
I get the same results with a more intricate command line:
$ bazel test --nofetch --define=ABSOLUTE_JAVABASE=/usr/lib/jvm/java-8-openjdk-amd64 --host_javabase=#local_jdk//:jdk --javabase=#local_jdk//:jdk --host_java_toolchain=#bazel_tools//tools/jdk:toolchain_hostjdk8 --java_toolchain=#bazel_tools//tools/jdk:toolchain_hostjdk8 //hello:hello_test
INFO: Build options --define, --host_java_toolchain, --host_javabase, and 2 more have changed, discarding analysis cache.
ERROR: /home/erenon/.cache/bazel/_bazel_erenon/afacf41c7e3fc3f4ea7510d344b4de38/external/bazel_tools/tools/jdk/BUILD:218:1: no such package '#remote_java_tools//': to fix, run
bazel fetch //...
External repository #remote_java_tools not found and fetching repositories is disabled. and referenced by '#bazel_tools//tools/jdk:JacocoCoverageRunner'
ERROR: Analysis of target '//hello:hello_test' failed; build aborted: no such package '#remote_java_tools//': to fix, run
bazel fetch //...
External repository #remote_java_tools not found and fetching repositories is disabled.
INFO: Elapsed time: 0.215s
INFO: 0 processes.
FAILED: Build did NOT complete successfully (0 packages loaded, 50 targets configured)
FAILED: Build did NOT complete successfully (0 packages loaded, 50 targets configured)
I tried every combination of the java flags, no luck. I also tried to enable every incompatible change (--all_incompatible_changes), which yields to a different result:
INFO: Build options --incompatible_allow_python_version_transitions, --incompatible_auto_configure_host_platform, --incompatible_cc_coverage, and 24 more have changed, discarding analysis cache.
ERROR: While resolving toolchains for target //hello:hello_test: com.google.devtools.build.lib.packages.BuildFileNotFoundException: no such package '#local_config_platform//': to fix, run
bazel fetch //...
External repository #local_config_platform not found and fetching repositories is disabled.
ERROR: Analysis of target '//hello:hello_test' failed; build aborted: com.google.devtools.build.lib.packages.BuildFileNotFoundException: no such package '#local_config_platform//': to fix, run
bazel fetch //...
External repository #local_config_platform not found and fetching repositories is disabled.
INFO: Elapsed time: 0.228s
INFO: 0 processes.
FAILED: Build did NOT complete successfully (1 packages loaded, 0 targets configured)
FAILED: Build did NOT complete successfully (1 packages loaded, 0 targets configured)
It now looks for #local_config_platform.
Is there a bazel target which I can build from source and includes these dependencies?
Is there a different command line, which enables bazel test --nofetch?
It appear that bootstrapping bazel from source can solve the issue. After downloading bazel-<version>-dist.zip from GitHub, in the unzipped folder:
env EXTRA_BAZEL_ARGS="--host_javabase=#local_jdk//:jdk" bash ./compile.sh
The compiled output is placed into output/bazel. This is a self-contained Bazel binary, without an embedded JDK.
https://docs.bazel.build/versions/master/install-compile-source.html
I'm having a problem with Building TF Hub from Source. Can Anyone please help me out? I've been following the steps as given in https://github.com/tensorflow/hub/blob/master/tensorflow_hub/pip_package/PIP.md
I've installed bazel 0.24.1.
Error I'm Getting:
ERROR: /home/tf_hub/hub/WORKSPACE:17:1: name 'git_repository' is not defined
ERROR: /home/tf_hub/hub/WORKSPACE:40:1: name 'http_archive' is not defined
ERROR: /home/tf_hub/hub/WORKSPACE:47:1: name 'new_http_archive' is not defined
ERROR: Error evaluating WORKSPACE file
ERROR: error loading package '': Encountered error while reading extension file 'tools/build_defs/repo/http.bzl': no such package '#bazel_tools//tools/build_defs/repo': error loading package 'external': Could not load //external package
ERROR: error loading package '': Encountered error while reading extension file 'tools/build_defs/repo/http.bzl': no such package '#bazel_tools//tools/build_defs/repo': error loading package 'external': Could not load //external package
INFO: Elapsed time: 2.552s
INFO: 0 processes.
FAILED: Build did NOT complete successfully (0 packages loaded)
Bazel Version: 0.24.1
Python Version: 3
Tensorflow Version: 2.0.0a
Commands to Reproduce:
(env)~/tf_hub$ git clone https://github.com/tensorflow/hub
(env)~/tf_hub$ cd hub && bazel build tensorflow_hub/pip_package:build_pip_package
Expected Output: No Error. Build Sucessful
Latest Versions of Bazel Doesn't support git_repository (which is still used by tensorflow_hub), so Uninstalling Bazel 0.24.1 and installing Bazel 0.18.1 worked.