Is there a way to export/save/load a previously trained autokeras model? I understand I can use the following code to save/load the underlying tensorflow best model:
model = reg.export_model()
model.save(MODEL_FILEPATH, save_format="tf")
best_model = load_model(MODEL_FILEPATH, custom_objects=ak.CUSTOM_OBJECTS)
However, in practice that wouldn't work, since my data has been fitted by autokeras, which takes care of data preparation and scaling. I don't think I have access to what autokeras is doing to the input data (X) before actually fitting, so I can't actually use the exported tensorflow best model to predict labels for new samples with un-prepared and unscaled features.
Am I missing something major here?
Also I noticed that there are some binaries in the autokeras temporary dir. That dir seems to be generated automatically. Is there a way to use that dir to load the previously-fit autokeras "super" model?
Just using import pickle will do the job - https://github.com/keras-team/autokeras/issues/1081#issuecomment-645508111 :
Related
The motivation behind this question is I had saved a Keras model using Matterport's MaskRCNN and in the tf.keras.callbacks.ModelCheckpoint() had very explicitly set the save_weights_only argument to False, so that the entire model would be saved (not just the weights).
Turns out there's a bug in the ModelCheckpoint() callback where it sometimes does not save the full model.
This is obviously a problem when you go to load the model after closing your TF session, as the Graph, architecture, and optimizer state are gone, making it hard (if not impossible) to reload that saved model.
Therefore, I am asking whether it is possible to somehow extract the TF session retroactively, from just the .h5 weights file, after the session has closed (resulting from, for example, your Notebook kernel crashing).
Not much code to go on, but there it is:
Given a .h5 file that was saved after each epoch of training a model in Keras, is it possible to extract the Graph session from that .h5 file, and if so, how?
I have several models saved in .h5 format but never called tf.get_session() during the saving of the model weights in h5 format.
with tf.session() as sess:
how to load this model using Tensorflow
TF 2.0 makes this a cinch, but how to solve this on Tensorflow version 1.14?
The end goal of this is to take a model saved with Keras as a .h5 file and do inference with it on Tensorflow Serving, which needs, to my knowledge, a protobuf file in .pb format.
https://medium.com/#pipidog/how-to-convert-your-keras-models-to-tensorflow-e471400b886a
I've tried keras_to_tensorflow:
https://github.com/amir-abdi/keras_to_tensorflow
The code to convert ModelCheckPoint saved in .h5 format to .pb format is shown below:
import tensorflow as tf
# The export path contains the name and the version of the model
tf.keras.backend.set_learning_phase(0) # Ignore dropout at inference
model = tf.keras.models.load_model('./model.h5')
export_path = './PlanetModel/1'
# Fetch the Keras session and save the model
# The signature definition is defined by the input and output tensors
# And stored with the default serving key
with tf.keras.backend.get_session() as sess:
tf.saved_model.simple_save(
sess,
export_path,
inputs={'input_image': model.input},
outputs={t.name:t for t in model.outputs})
For more information, please refer this article.
For other ways to do it, please refer this Stack Overflow Answer.
I've created a model using google clouds vision api. I spent countless hours labeling data, and trained a model. At the end of almost 20 hours of "training" the model, it's still hit and miss.
How can I iterate on this model? I don't want to lose the "learning" it's done so far.. It works about 3/5 times.
My best guess is that I should loop over the objects again, find where it's wrong, and label accordingly. But I'm not sure of the best method for that. Should I be labeling all images where it "misses" as TEST data images? Are there best practices or resources I can read on this topic?
I'm by no means an expert, but here's what I'd suggest in order of most to least important:
1) Add more data if possible. More data is always a good thing, and helps develop robustness with your network's predictions.
2) Add dropout layers to prevent over-fitting
3) Have a tinker with kernel and bias initialisers
4) [The most relevant answer to your question] Save the training weights of your model and reload them into a new model prior to training.
5) Change up the type of model architecture you're using. Then, have a tinker with epoch numbers, validation splits, loss evaluation formulas, etc.
Hope this helps!
EDIT: More information about number 4
So you can save and load your model weights during or after the model has trained. See here for some more in-depth information about saving.
Broadly, let's cover the basics. I'm assuming you're going through keras but the same applies for tf:
Saving the model after training
Simply call:
model_json = model.to_json()
with open("{Your_Model}.json", "w") as json_file:
json_file.write(model_json)
# serialize weights to HDF5
model.save_weights("{Your_Model}.h5")
print("Saved model to disk")
Loading the model
You can load the model structure from json like so:
from keras.models import model_from_json
json_file = open('{Your_Model.json}', 'r')
loaded_model_json = json_file.read()
json_file.close()
model = model_from_json(loaded_model_json)
And load the weights if you want to:
model.load_weights('{Your_Weights}.h5', by_name=True)
Then compile the model and you're ready to retrain/predict. by_name for me was essential to re-load the weights back into the same model architecture; leaving this out may cause an error.
Checkpointing the model during training
cp_callback = tf.keras.callbacks.ModelCheckpoint(filepath={checkpoint_path},
save_weights_only=True,
verbose=1)
# Train the model with the new callback
model.fit(train_images,
train_labels,
epochs=10,
validation_data=(test_images,test_labels),
callbacks=[cp_callback]) # Pass callback to training
I'm trying to obtain the losses of all clients in tensorflow model without luck. The answer to post how to print local outputs in tensorflow federated?
suggests to create our NN model from scratch. However, I already have my keras NN model. So is there a way to still access the local client losses without having to build NN from scratch?
I tried to use tff.federated_collect(), but not sure how is that possible.
This is partly my attempt:
trainer_Itr_Process = tff.learning.build_federated_averaging_process(model_fn_Federated,server_optimizer_fn=(lambda : tf.keras.optimizers.SGD(learning_rate=learn_rate)),client_weight_fn=None)
FLstate = trainer_Itr_Process.initialize()
#tff.learning.Model
def federated_output_computation():
return{
'num_examples': tff.federated_sum(metrics.num_examples),
'loss': tff.federated_mean(metrics.loss, metrics.num_examples),
'accuracy': tff.federated_mean(metrics.accuracy, metrics.num_examples),
'per_client/num_examples': tff.federated_collect(metrics.num_examples),
'per_client/loss': tff.federated_collect(metrics.loss),
'per_client/accuracy': tff.federated_collect(metrics.accuracy),
}
This is the error I received:
#tff.learning.Model
TypeError: object() takes no parameters
tff.learning.Model is not a decorator for functions, it is the class interface used by the tff.learning module.
Probably the best way to change the implementation of tff.learning.Model.federated_output_computation (what is recommended in how to print local outputs in tensorflow federated?) is to create your own subclass of tff.learning.Model, that implements a different federated_output_computation property. This would be close to re-implementing tff.learning.from_keras_model(), except providing the custom metric aggregation; so looking at the implementation (here) can be useful, but ingesting Keras models is non-trivial at the moment.
I have same my inception model in Pycharm using TensorFlow library. Every time I run the project, it starts training the Data set. I want to skip the training every time I run model because once the model has been save ,there is no need to train the data again and again. How I get to know my model has been save successfully? How can I apply the save model in same file?
You can save/restore/load your model using TensorFlow:
Save:
builder = tf.saved_model.builder.SavedModelBuilder(export_dir) with tf.Session(graph=tf.Graph()) as sess: ... builder.add_meta_graph_and_variables(sess,
[tag_constants.TRAINING],
signature_def_map=foo_signatures,
assets_collection=foo_assets,
strip_default_attrs=True)
...
builder.save()
Load:
with tf.Session(graph=tf.Graph()) as sess:
tf.saved_model.loader.load(sess, [tag_constants.TRAINING], export_dir)
...
For further reference: TensorFlow Guide on Saving a Model
Actually, once you have saved your model, some files will be saved to your directory with the extension .YAML, .h5 or .meta(for graph), you can check the accuracy of model by restoring from saved file, just for sanity check.
There is nice tutorial on this:
https://www.tensorflow.org/guide/saved_model
http://cv-tricks.com/tensorflow-tutorial/save-restore-tensorflow-models-quick-complete-tutorial/
If you are use keras-api to build model, then this link will be useful for saving and restoring https://keras.io/getting-started/faq/#how-can-i-save-a-keras-model
To save a model in Keras, what are the differences between the output files of:
model.save()
model.save_weights()
ModelCheckpoint() in the callback
The saved file from model.save() is larger than the model from model.save_weights(), but significantly larger than a JSON or Yaml model architecture file. Why is this?
Restating this: Why is size(model.save()) + size(something) = size(model.save_weights()) + size(model.to_json()), what is that "something"?
Would it be more efficient to just model.save_weights() and model.to_json(), and load from these than to just do model.save() and load_model()?
What are the differences?
save() saves the weights and the model structure to a single HDF5 file. I believe it also includes things like the optimizer state. Then you can use that HDF5 file with load() to reconstruct the whole model, including weights.
save_weights() only saves the weights to HDF5 and nothing else. You need extra code to reconstruct the model from a JSON file.
model.save_weights(): Will only save the weights so if you need, you are able to apply them on a different architecture
mode.save(): Will save the architecture of the model + the the weights + the training configuration + the state of the optimizer
Just to add what ModelCheckPoint's output is, if it's relevant for anyone else: used as a callback during model training, it can either save the whole model or just the weights depending on what state the save_weights_only argument is set to. TRUE and weights only are saved, akin to calling model.save_weights(). FALSE (default) and the whole model is saved, as in calling model.save().
Adding to the answers above, as of tf.keras version '2.7.0', the model can be saved in 2 formats using model.save() i.e., the TensorFlow SavedModel format, and the older Keras H5 format. The recommended format is SavedModel and it is the default when model.save() is called. To save to .h5(HDF5) format, use model.save('my_model', save_format='h5') More