Does dockerd support WatchdogSec sd_notify health checks? - docker

We've been having issues where the Docker daemon will occasionally stop responding on one of our Kubernetes systems, but Systemd still thinks the service is running:
systemctl status docker
● docker.service - Docker Application Container Engine
Loaded: loaded (/lib/systemd/system/docker.service; enabled; vendor preset: enabled)
Active: active (running) since Mon 2019-04-15 20:40:57 UTC; 3 months 22 days ago
Docs: https://docs.docker.com
Main PID: 1281 (dockerd)
Tasks: 1409
Memory: 31.0G
CPU: 5d 17h 3min 4.758s
CGroup: /system.slice/docker.service
├─ 1281 /usr/bin/dockerd -H fd://
...
There isn't anything in the journalctl -u docker or syslog files to indicate what the issue is, but the Docker daemon no longer responds to requests (docker ps just hangs). We are currently using the 17.03.2~ce-0~ubuntu-xenial package for Ubuntu 16.04, which has the following service unit:
cat /lib/systemd/system/docker.service
[Unit]
Description=Docker Application Container Engine
Documentation=https://docs.docker.com
After=network.target docker.socket firewalld.service
Requires=docker.socket
[Service]
Type=notify
# the default is not to use systemd for cgroups because the delegate issues still
# exists and systemd currently does not support the cgroup feature set required
# for containers run by docker
ExecStart=/usr/bin/dockerd -H fd://
ExecReload=/bin/kill -s HUP $MAINPID
LimitNOFILE=1048576
# Having non-zero Limit*s causes performance problems due to accounting overhead
# in the kernel. We recommend using cgroups to do container-local accounting.
LimitNPROC=infinity
LimitCORE=infinity
# Uncomment TasksMax if your systemd version supports it.
# Only systemd 226 and above support this version.
TasksMax=infinity
TimeoutStartSec=0
# set delegate yes so that systemd does not reset the cgroups of docker containers
Delegate=yes
# kill only the docker process, not all processes in the cgroup
KillMode=process
[Install]
WantedBy=multi-user.target
I noticed that even though it is a Type=notify service, there isn't a WatchdogSec= defined in the service unit.
Does the Docker daemon support setting a watchdog timeout for sd_notify based health checks?

No, currently the components/engine/cmd/dockerd/daemon_linux.go file only implements systemdDaemon.SdNotifyReady to notify Systemd when the process has started. For watchdog support it would have to use something like SdWatchdogEnabled to continually send SdNotifyWatchdog = "WATCHDOG=1" notifications.
If you try and set WatchdogSec=60s on the docker.service file it will kill and restart the service because the daemon doesn't send the required notifications.
systemctl status docker.service
● docker.service - Docker Application Container Engine
Loaded: loaded (/lib/systemd/system/docker.service; enabled; vendor preset: enabled)
Active: active (running) since Thu 2019-08-08 02:09:52 UTC; 50s ago
systemctl status docker.service
● docker.service - Docker Application Container Engine
Loaded: loaded (/lib/systemd/system/docker.service; enabled; vendor preset: enabled)
Active: deactivating (stop-sigabrt) (Result: watchdog) since Thu 2019-08-08 02:10:02 UTC; 45ms ago
systemctl status docker.service
● docker.service - Docker Application Container Engine
Loaded: loaded (/lib/systemd/system/docker.service; enabled; vendor preset: enabled)
Active: activating (start) since Thu 2019-08-08 02:10:04 UTC; 777ms ago
# Log entries:
Aug 08 02:09:14 kam1 systemd[1]: Starting Docker Application Container Engine...
Aug 08 02:09:15 kam1 systemd[1]: Started Docker Application Container Engine.
Aug 08 02:10:15 kam1 systemd[1]: docker.service: Watchdog timeout (limit 60s)!
Aug 08 02:10:15 kam1 systemd[1]: docker.service: Killing process 12383 (dockerd) with signal SIGABRT.
Aug 08 02:10:16 kam1 systemd[1]: docker.service: Main process exited, code=exited, status=2/INVALIDARGUMENT
Aug 08 02:10:16 kam1 systemd[1]: docker.service: Failed with result 'watchdog'.
Aug 08 02:10:18 kam1 systemd[1]: docker.service: Service hold-off time over, scheduling restart.
Aug 08 02:10:18 kam1 systemd[1]: docker.service: Scheduled restart job, restart counter is at 3.
Aug 08 02:10:18 kam1 systemd[1]: Stopped Docker Application Container Engine.
Aug 08 02:10:18 kam1 systemd[1]: Starting Docker Application Container Engine...

Related

Run Docker on Raspberry Pi4 with overlay fs

I prefer to create a situation where on a Raspberry Pi4 Docker is running while the SD-card is read only. This with overlay fs.
In the dockercontainer a database is running, the data of the database is written to an USB-stick (volume mapping).
When overlayfs is activated (after reboot, enabled via “sudo raspi-config”), docker will not start-up any more.
The steps on https://docs.docker.com/storage/storagedriver/overlayfs-driver/
System information:
Linux raspberrypi 5.10.63-v8+ #1488 SMP PREEMPT Thu Nov 18 16:16:16 GMT 2021 aarch64 GNU/Linux
Docker information:
pi#raspberrypi:~ $ docker info
Client:
Context: default
Debug Mode: false
Plugins:
app: Docker App (Docker Inc., v0.9.1-beta3)
buildx: Build with BuildKit (Docker Inc., v0.6.3-docker)
Server:
Containers: 1
Running: 1
Paused: 0
Stopped: 0
Images: 1
Server Version: 20.10.11
Storage Driver: overlay2
Backing Filesystem: extfs
Supports d_type: true
Native Overlay Diff: true
userxattr: false
………
Status docker after restart:
pi#raspberrypi:~ $ sudo systemctl status docker.*
Warning: The unit file, source configuration file or drop-ins of docker.service changed on disk. Run 'systemctl daemon-reload' to reload units.
● docker.socket - Docker Socket for the API
Loaded: loaded (/lib/systemd/system/docker.socket; enabled; vendor preset: enabled)
Active: failed (Result: service-start-limit-hit) since Thu 2021-12-09 14:30:43 GMT; 1h 13min ago
Triggers: ● docker.service
Listen: /run/docker.sock (Stream)
CPU: 2ms
Dec 09 14:30:36 raspberrypi systemd[1]: Starting Docker Socket for the API.
Dec 09 14:30:36 raspberrypi systemd[1]: Listening on Docker Socket for the API.
Dec 09 14:30:43 raspberrypi systemd[1]: docker.socket: Failed with result 'service-start-limit-hit'
● docker.service - Docker Application Container Engine
Loaded: loaded (/lib/systemd/system/docker.service; enabled; vendor preset: enabled)
Active: failed (Result: exit-code) since Thu 2021-12-09 14:30:43 GMT; 1h 13min ago
TriggeredBy: ● docker.socket
Docs: https://docs.docker.com
Main PID: 992 (code=exited, status=1/FAILURE)
CPU: 162ms
Dec 09 14:30:43 raspberrypi systemd[1]: docker.service: Scheduled restart job, restart counter is at 3.
Dec 09 14:30:43 raspberrypi systemd[1]: Stopped Docker Application Container Engine.
Dec 09 14:30:43 raspberrypi systemd[1]: docker.service: Start request repeated too quickly.
Dec 09 14:30:43 raspberrypi systemd[1]: docker.service: Failed with result 'exit-code'.
Dec 09 14:30:43 raspberrypi systemd[1]: Failed to start Docker Application Container Engine.
Running the command given in docker.service with additional overlay flag
pi#raspberrypi:~ $ sudo /usr/bin/dockerd --storage-driver=overlay -H fd:// --containerd=/run/containerd/containerd.sock
unable to configure the Docker daemon with file /etc/docker/daemon.json: the following directives are specified both as a flag and in the configuration file: storage-driver: (from flag: overlay, from file: overlay2)
pi#raspberrypi:~ $ sudo /usr/bin/dockerd -H fd:// --containerd=/run/containerd/containerd.sock
INFO[2021-12-09T14:34:31.667296985Z] Starting up
failed to load listeners: no sockets found via socket activation: make sure the service was started by systemd
Which steps am I missing to be able to run Docker with overlay fs, such that the SD-card in the Raspberry is read only?
Without the overlay fs active it all works as expected.
I ran into this issue as well and found a way around it. In summary, you can't run the default Docker FS driver (overlay2) on overlayfs. Fortunately, Docker supports other storage drivers, including fuse-overlayfs. Switching to this driver resolves the issue but there's one final catch. When Docker starts, it attempts to rename /var/lib/docker/runtimes and since overlayfs doesn't support renames of directories already in lower layers, it fails. If you simply rm -rf this directory while Docker is stopped and before you enable RPi's overlayfs, everything should work.

How to fix docker storage-driver=overlay2 problem

I need to change the underlying storage for a Proxmox LXC Debian Buster container from RAW to ZFS. For this I restored a snapshot to ZFS storage. This is normally transparent for the OS in the container, but in this case docker no longer starts.
The initial problem was that docker wasn't started, and after some digging around I find this:
# dockerd -H tcp://0.0.0.0:2375 -H unix:///var/run/docker.sock
INFO[2021-08-03T09:24:40.909844803Z] Starting up
...
ERRO[2021-08-03T09:24:56.914420548Z] failed to mount overlay: invalid argument storage-driver=overlay2
ERRO[2021-08-03T09:24:56.914439880Z] [graphdriver] prior storage driver overlay2 failed: driver not supported
failed to start daemon: error initializing graphdriver: driver not supported
How can I fix this?
EDIT:
I tried the suggested fix, but still no cigar:
root#mail:/var/log# systemctl status docker.service
* docker.service - Docker Application Container Engine
Loaded: loaded (/lib/systemd/system/docker.service; enabled; vendor preset: enabled)
Active: failed (Result: exit-code) since Sat 2021-10-09 10:05:49 UTC; 1min 23s ago
Docs: https://docs.docker.com
Process: 236 ExecStart=/usr/bin/dockerd -H fd:// --containerd=/run/containerd/containerd.sock (code=exited, status=1/FAILURE)
Main PID: 236 (code=exited, status=1/FAILURE)
Oct 09 10:05:49 mail systemd[1]: docker.service: Service RestartSec=2s expired, scheduling restart.
Oct 09 10:05:49 mail systemd[1]: docker.service: Scheduled restart job, restart counter is at 3.
Oct 09 10:05:49 mail systemd[1]: Stopped Docker Application Container Engine.
Oct 09 10:05:49 mail systemd[1]: docker.service: Start request repeated too quickly.
Oct 09 10:05:49 mail systemd[1]: docker.service: Failed with result 'exit-code'.
Oct 09 10:05:49 mail systemd[1]: Failed to start Docker Application Container Engine.
The link offered suggests creating a new zpool within the container. Seems a bit of an overkill for that to be necessary, no?
Configure Docker to use zfs. Edit /etc/docker/daemon.json and set the storage-driver to zfs. If the file was empty before, it should now look like this:
{
"storage-driver": "zfs"
}
more details: https://docs.docker.com/storage/storagedriver/zfs-driver/

Cannot start memcached

I cannot get memcached to run on my server.
This is what I tried so far:
% sudo systemctl start memcached # no output
% sudo systemctl status memcached.service
● memcached.service - memcached daemon
Loaded: loaded (/lib/systemd/system/memcached.service; enabled; vendor preset: enabled)
Active: failed (Result: exit-code) since Sun 2020-02-16 17:45:09 CET; 4s ago
Process: 22725 ExecStart=/usr/share/memcached/scripts/systemd-memcached-wrapper /etc/memcached.conf (code=exited, status=71)
Main PID: 22725 (code=exited, status=71)
systemd[1]: Started memcached daemon.
systemd-memcached-wrapper[22725]: bind(): Cannot assign requested address
systemd-memcached-wrapper[22725]: failed to listen on TCP port 11211: Cannot assign requested address
systemd[1]: memcached.service: Main process exited, code=exited, status=71/n/a
systemd[1]: memcached.service: Unit entered failed state.
systemd[1]: memcached.service: Failed with result 'exit-code'.
I am running Ubuntu 16.04.6 LTS
How can I start my memcached service?
Have a look into /etc/memcached.conf there might be written sth. like
-l xxx.xx.xx.xx
If you are trying to connect via localhost: just comment the line.
If you are trying to connect from somewhere else check the IP for correctness.

Warning: Stopping docker.service, but it can still be activated by: docker.socket

I've reinstalled Docker. When I'm trying to start Docker, everything is fine:
# /etc/init.d/docker start
[ ok ] Starting docker (via systemctl): docker.service.
until I want to stop Docker service and many times restart it:
# /etc/init.d/docker stop
[....] Stopping docker (via systemctl): docker.serviceWarning: Stopping docker.service, but it can still be activated by:
docker.socket
. ok
Finally, I've got error:
# /etc/init.d/docker start
[....] Starting docker (via systemctl): docker.serviceJob for docker.service failed.
See "systemctl status docker.service" and "journalctl -xe" for details.
failed!
# systemctl status docker.service
● docker.service - Docker Application Container Engine
Loaded: loaded (/lib/systemd/system/docker.service; enabled; vendor preset: enabled)
Active: failed (Result: start-limit-hit) since Sat 2017-11-25 20:04:20 CET; 2min 4s ago
Docs: https://docs.docker.com
Process: 12845 ExecStart=/usr/bin/dockerd -H fd:// (code=exited, status=0/SUCCESS)
Main PID: 12845 (code=exited, status=0/SUCCESS)
CPU: 326ms
Nov 25 20:04:18 example.com systemd[1]: Started Docker Application Container Engine.
Nov 25 20:04:18 example.com dockerd[12845]: time="2017-11-25T20:04:18.191949863+01:00" level=inf
Nov 25 20:04:19 example.com systemd[1]: Stopping Docker Application Container Engine...
Nov 25 20:04:19 example.com dockerd[12845]: time="2017-11-25T20:04:19.368990531+01:00" level=inf
Nov 25 20:04:19 example.com dockerd[12845]: time="2017-11-25T20:04:19.37953454+01:00" level=info
Nov 25 20:04:20 example.com systemd[1]: Stopped Docker Application Container Engine.
Nov 25 20:04:21 example.com systemd[1]: docker.service: Start request repeated too quickly.
Nov 25 20:04:21 example.com systemd[1]: Failed to start Docker Application Container Engine.
Nov 25 20:04:21 example.com systemd[1]: docker.service: Unit entered failed state.
Nov 25 20:04:21 example.com systemd[1]: docker.service: Failed with result 'start-limit-hit'.
I've installed Docker on Debian 9 Stretch.
Can anyone help me get rid of this warning and resolve an error "Failed with result 'start-limit-hit'"?
Simply start and stop the socket if the docker is triggered by the socket
sudo systemctl stop docker.socket
This is because in addition to the docker.service unit file, there is a docker.socket unit file... this is for socket activation. The warning means if you try to connect to the docker socket while the docker service is not running, then systemd will automatically start docker for you.
You can get rid of this by removing /lib/systemd/system/docker.socket... you may also need to remove -H fd:// from the docker.service unit file.

Docker failed to restart with data on mount hard drive

I mount a hard drive on /mnt/data with mount /dev/vdb /mnt/data
Change default docker folder inside : /etc/docker/daemon.json by
{
"graph": "/mnt/data/docker"
}
Everything work fine.
but after a computer restart :
docker daemon can't restart
I got these error :
$ service docker start
Job for docker.service failed because the control process exited with error code. See "systemctl status docker.service" and "journalctl -xe" for details.
and
$ systemctl status docker.service
● docker.service - Docker Application Container Engine
Loaded: loaded (/lib/systemd/system/docker.service; enabled; vendor preset: enabled)
Active: inactive (dead) (Result: exit-code) since Thu 2017-10-05 13:58:58 UTC; 45s ago
Docs: https://docs.docker.com
Process: 5896 ExecStart=/usr/bin/dockerd -H fd:// (code=exited, status=1/FAILURE)
Main PID: 5896 (code=exited, status=1/FAILURE)
Oct 05 13:58:58 mycomputer systemd[1]: Failed to start Docker Application Container Engine.
Oct 05 13:58:58 mycomputer systemd[1]: docker.service: Unit entered failed state.
Oct 05 13:58:58 mycomputer systemd[1]: docker.service: Failed with result 'exit-code'.
Oct 05 13:58:58 mycomputer systemd[1]: docker.service: Service hold-off time over, scheduling restart.
Oct 05 13:58:58 mycomputer systemd[1]: Stopped Docker Application Container Engine.
Oct 05 13:58:58 mycomputer systemd[1]: docker.service: Start request repeated too quickly.
Oct 05 13:58:58 mycomputer systemd[1]: Failed to start Docker Application Container Engine.
Docker is starting before your non-OS disk (mnt/data/docker) is mounted. You can ask docker to wait for a successful mount before starting docker.
Find the mount, edit your Docker systemd service file to require and wait for the mount before starting.
systemctl list-units --type==mount # Lists all the mounts.
systemctl status <example.mount> # Get details about mount. Find the one which matches your mount directory
sudo nano /lib/systemd/system/docker.service # Edit your systemd service file
Add the <example.mount> name at the end of the "After" and "Requires" row.
[Unit]
Description=Docker Application Container Engine
Documentation=https://docs.docker.com
BindsTo=containerd.service
After=network-online.target firewalld.service containerd.service <example.mount>
Wants=network-online.target
Requires=docker.socket <example.mount>
...
sudo systemctl daemon-reload
sudo systemctl restart docker.service

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