House Prices challenge Kaggle
I'm trying to predict prices with RandomForestClassifier. After predict it results same prices for all id. Do you have an idea of the problem ?
clf = RandomForestClassifier(n_estimators=50)
clf = clf.fit(X_train,y_train)
clf.score(X_train, y_train)
X = df_test2[feature_cols]
imp = Imputer(missing_values='NaN', strategy='mean', axis=0)
df_imp = imp.fit_transform(X)
df_test_scale = scaler.transform(df_imp)
y_pred = clf.predict(df_test_scale)
predict_prices = pd.DataFrame({"Id" : df_test2['Id'], "SalePrice":y_pred})
predict_prices
Since you have scaled the training set, scale test set with same scaler.
Change as below:
clf = RandomForestClassifier(n_estimators=50)
imp = Imputer(missing_values='NaN', strategy='mean', axis=0)
X_train_imp=imp.Transform(X_train)
X_train_scaled=scaler.transform(X_train_imp)
clf = clf.fit(X_train_scaled,y_train)
clf.score(X_train, y_train)
X = df_test2[feature_cols]
df_imp = imp.fit_transform(X)
df_test_scale = scaler.transform(df_imp)
y_pred = clf.predict(df_test_scale)
predict_prices = pd.DataFrame({"Id" : df_test2['Id'], "SalePrice":y_pred})
predict_prices
Related
I am training a BERT model with a downstream task to classify movie genres. I am using HuggingFace pretrained model (aleph-bert since data is in Hebrew)
When training, I get the following error:
ValueError: Expected input batch_size (3744) to match target batch_size (16).
This is my notebook:
https://colab.research.google.com/drive/1mqIUPnLOu_H-URn5tzE6gGySsW3oAcRY?usp=sharing
The error happens in the compute_loss functions, while performing the cross_entropy step.
My batch size is 16 but for some reason the bert output returns a different size.
The relevant code:
def data_prep_for_genre(genre):
X = movies_df['overview']
y = movies_df[genre].rename('labels', inplace=True).astype(float)
X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.2)
X_train = tokenizer(X_train.to_list(), truncation=True)
X_test = tokenizer(X_test.to_list(), truncation=True)
train_dataset = TextData(X_train, y_train.to_list())
test_dataset = TextData(X_test, y_test.to_list())
# define model:
model = BertForTokenClassification.from_pretrained("onlplab/alephbert-base", num_labels=2)
return model, train_dataset, test_dataset
class MyTrainer(Trainer):
def compute_metrics(pred):
labels = pred.label_ids
preds = pred.predictions.argmax(-1)
precision, recall, f1, _ = precision_recall_fscore_support(labels, preds, average='binary')
acc = accuracy_score(labels, preds)
return {
'accuracy': acc,
'f1': f1,
'precision': precision,
'recall': recall
}
training_args = TrainingArguments(
output_dir='./results',
num_train_epochs=10,
per_device_train_batch_size=16,
per_device_eval_batch_size=32,
warmup_steps=50,
weight_decay=0.01,
logging_dir='./logs',
logging_steps=10
)
data_collator = DataCollatorWithPadding(tokenizer=tokenizer)
for genre in GENRE_SET:
model, train_dataset, test_dataset = data_prep_for_genre(genre)
trainer = MyTrainer(
model=model,
args=training_args,
train_dataset=train_dataset,
# eval_dataset=test_dataset,
data_collator=data_collator
)
trainer.train()
I'm currently working on a Naive Bayes sentiment analysis program but I'm not quite sure how to determine it's accuracy. My code is:
x = df["Text"]
y = df["Mood"]
test_size = 1785
x_train = x[:-test_size]
y_train = y[:-test_size]
x_test = x[-test_size:]
y_test = y[-test_size:]
count_vect = CountVectorizer()
X_train_counts = count_vect.fit_transform(x_train)
tfidf_transformer = TfidfTransformer()
X_train_tfidf = tfidf_transformer.fit_transform(X_train_counts)
clf = MultinomialNB().fit(X_train_tfidf, y_train)
print(clf.predict(count_vect.transform(["Random text"])))
The prediction works just fine for a sentence that I give it, however I want to run it on 20% from my database (x_test and y_test) and calculate the accuracy. I'm not quite sure how to approach this. Any help would be appreciated.
I've also tried the following:
predictions = clf.predict(x_test)
print(accuracy_score(y_test, predictions))
Which gives me the following error:
ValueError: could not convert string to float: "A sentence from the dataset"
before usiing predictions = clf.predict(x_test) please convert the test set also to numeric
x_test = count_vect.transform(x_test).toarray()
you can find step by step to do this [here]
Image Transformation and Batch
transform = transforms.Compose([
transforms.Resize((100,100)),
transforms.ToTensor(),
transforms.Normalize([0.485,0.456,0.406],[0.229,0.224,0.225])
])
data_set = datasets.ImageFolder(root="/content/drive/My Drive/models/pokemon/dataset",transform=transform)
train_loader = DataLoader(data_set,batch_size=10,shuffle=True,num_workers=6)
Below is my Model
class pokimonClassifier(nn.Module):
def __init__(self):
super().__init__()
self.conv1 = nn.Conv2d(3,6,3,1)
self.conv2 = nn.Conv2d(6,18,3,1)
self.fc1 = nn.Linear(23*23*18,520)
self.fc2 = nn.Linear(520,400)
self.fc3 = nn.Linear(400,320)
self.fc4 = nn.Linear(320,149)
def forward(self,x):
x = F.relu(self.conv1(x))
x = F.max_pool2d(x,2,2)
x = F.relu(self.conv2(x))
x = F.max_pool2d(x,2,2)
x = x.view(-1,23*23*18)
x = F.relu(self.fc1(x))
x = F.relu(self.fc2(x))
x = F.relu(self.fc3(x))
x = F.log_softmax(self.fc4(x), dim=1)
return x
Creating Instance of model, Use GPU, Set Criterion and optimizer
Here is firsr set lr = 0.001 then later changed to 0.0001
model = pokimonClassifier()
model.to('cuda')
criterion = nn.CrossEntropyLoss()
optimizer = torch.optim.Adam(model.parameters(),lr = 0.0001)
Training Dataset
for e in range(epochs):
train_crt = 0
for b,(train_x,train_y) in enumerate(train_loader):
b+=1
train_x, train_y = train_x.to('cuda'), train_y.to('cuda')
# train model
y_preds = model(train_x)
loss = criterion(y_preds,train_y)
# analysis model
predicted = torch.max(y_preds,1)[1]
correct = (predicted == train_y).sum()
train_crt += correct
# print loss and accuracy
if b%50 == 0:
print(f'Epoch {e} batch{b} loss:{loss.item()} ')
# updating weights and bais
optimizer.zero_grad()
loss.backward()
optimizer.step()
train_loss.append(loss)
train_correct.append(train_crt)
My loss value remains between 4 - 3 and its not converging to 0.
I am super new to deep learning and I don't know much about it.
The dataset I am using is here: https://www.kaggle.com/thedagger/pokemon-generation-one
A help will be much appreciated.
Thank You
The problem with your network is that you are applying softmax() twice - once at fc4() layer and once more while using nn.CrossEntropyLoss().
According to the official documentation, Pytorch takes care of softmax() while applying nn.CrossEntropyLoss().
So in your code, please change this line
x = F.log_softmax(self.fc4(x), dim=1)
to
x = self.fc4(x)
I built a two layered LSTM model(keras model) for a movie review dataset from kaggle : Dataset
While training the model, every epoch was giving the same accuracy of 0.5098.
Then I thought it might not be learning the long distance dependencies.Then instead of LSTM I used bidirectional LSTM. But, still model's accuracy while training was 0.5098 for every epoch. I trained the model for 8 hours/35 epochs on CPU. Then I stopped training.
Code:
import pandas as pd
from sentiment_utils import *
import keras
import keras.backend as k
import numpy as np
train_data = pd.read_table('train.tsv')
X_train = train_data.iloc[:,2]
Y_train = train_data.iloc[:,3]
from sklearn.preprocessing import OneHotEncoder
Y_train = Y_train.reshape(Y_train.shape[0],1)
ohe = OneHotEncoder(categorical_features=[0])
Y_train = ohe.fit_transform(Y_train).toarray()
maxLen = len(max(X_train, key=len).split())
words_to_index, index_to_words, word_to_vec_map = read_glove_vectors("glove/glove.6B.50d.txt")
m = X_train.shape[0]
def read_glove_vectors(path):
with open(path, encoding='utf8') as f:
words = set()
word_to_vec_map = {}
for line in f:
line = line.strip().split()
cur_word = line[0]
words.add(cur_word)
word_to_vec_map[cur_word] = np.array(line[1:], dtype=np.float64)
i = 1
words_to_index = {}
index_to_words = {}
for w in sorted(words):
words_to_index[w] = i
index_to_words[i] = w
i = i + 1
return words_to_index, index_to_words, word_to_vec_map
def sentance_to_indices(X_train, words_to_index, maxLen, dash_index_list, keys):
m = X_train.shape[0]
X_indices = np.zeros((m, maxLen))
for i in range(m):
if i in dash_index_list:
continue
sentance_words = X_train[i].lower().strip().split()
j = 0
for word in sentance_words:
if word in keys:
X_indices[i, j] = words_to_index[word]
j += 1
return X_indices
def pretrained_embedding_layer(word_to_vec_map, words_to_index):
emb_dim = word_to_vec_map['pen'].shape[0]
vocab_size = len(words_to_index) + 1
emb_matrix = np.zeros((vocab_size, emb_dim))
for word, index in words_to_index.items():
emb_matrix[index, :] = word_to_vec_map[word]
emb_layer= keras.layers.embeddings.Embedding(vocab_size, emb_dim, trainable= False)
emb_layer.build((None,))
emb_layer.set_weights([emb_matrix])
return emb_layer
def get_model(input_shape, word_to_vec_map, words_to_index):
sentance_indices = keras.layers.Input(shape = input_shape, dtype='int32')
embedding_layer = pretrained_embedding_layer(word_to_vec_map, words_to_index)
embeddings = embedding_layer(sentance_indices)
X = keras.layers.Bidirectional(keras.layers.LSTM(128, return_sequences=True))(embeddings)
X = keras.layers.Dropout(0.5)(X)
X = keras.layers.Bidirectional(keras.layers.LSTM(128, return_sequences=True))(X)
X = keras.layers.Dropout(0.5)(X)
X = keras.layers.Bidirectional(keras.layers.LSTM(128, return_sequences=False))(X)
X = keras.layers.Dropout(0.5)(X)
X = keras.layers.Dense(5)(X)
X = keras.layers.Activation('softmax')(X)
model = keras.models.Model(sentance_indices, X)
return model
model = get_model((maxLen,), word_to_vec_map,words_to_index)
model.compile(loss='categorical_crossentropy', optimizer='adam', metrics=['accuracy'])
dash_index_list = []
for i in range(m):
if '-' in X_train[i]:
dash_index_list.append(i)
keys = []
for key in word_to_vec_map.keys():
keys.append(key)
X_train_indices = sentance_to_indices(X_train, words_to_index, maxLen, dash_index_list, keys)
model.fit(X_train_indices, Y_train, epochs = 50, batch_size = 32, shuffle=True)
I think the way you defined the model architecture doesn't make sense! Try looking at this example on IMDB movie reviews with LSTM on Keras github repo: Trains an LSTM model on the IMDB sentiment classification task.
I have a data set which contains a list of stock prices. I need to use the tensorflow and python to predict the close price.
Q1: I have the following code which takes the first 2000 records as training and 2001 to 20000 records as test but I don't know how to change the code to do the prediction of the close price of today and 1 day later??? Please advise!
#!/usr/bin/env python2
import numpy as np
import pandas as pd
import tensorflow as tf
import matplotlib.pyplot as plt
def feature_scaling(input_pd, scaling_meathod):
if scaling_meathod == 'z-score':
scaled_pd = (input_pd - input_pd.mean()) / input_pd.std()
elif scaling_meathod == 'min-max':
scaled_pd = (input_pd - input_pd.min()) / (input_pd.max() -
input_pd.min())
return scaled_pd
def input_reshape(input_pd, start, end, batch_size, batch_shift, n_features):
temp_pd = input_pd[start-1: end+batch_size-1]
output_pd = map(lambda y : temp_pd[y:y+batch_size], xrange(0, end-start+1, batch_shift))
output_temp = map(lambda x : np.array(output_pd[x]).reshape([-1]), xrange(len(output_pd)))
output = np.reshape(output_temp, [-1, batch_size, n_features])
return output
def target_reshape(input_pd, start, end, batch_size, batch_shift, n_step_ahead, m_steps_pred):
temp_pd = input_pd[start+batch_size+n_step_ahead-2: end+batch_size+n_step_ahead+m_steps_pred-2]
print temp_pd
output_pd = map(lambda y : temp_pd[y:y+m_steps_pred], xrange(0, end-start+1, batch_shift))
output_temp = map(lambda x : np.array(output_pd[x]).reshape([-1]), xrange(len(output_pd)))
output = np.reshape(output_temp, [-1,1])
return output
def lstm(input, n_inputs, n_steps, n_of_layers, scope_name):
num_layers = n_of_layers
input = tf.transpose(input,[1, 0, 2])
input = tf.reshape(input,[-1, n_inputs])
input = tf.split(0, n_steps, input)
with tf.variable_scope(scope_name):
cell = tf.nn.rnn_cell.BasicLSTMCell(num_units=n_inputs)
cell = tf.nn.rnn_cell.MultiRNNCell([cell]*num_layers)
output, state = tf.nn.rnn(cell, input, dtype=tf.float32) yi1
output = output[-1]
return output
feature_to_input = ['open price', 'highest price', 'lowest price', 'close price','turnover', 'volume','mean price']
feature_to_predict = ['close price']
feature_to_scale = ['volume']
sacling_meathod = 'min-max'
train_start = 1
train_end = 1000
test_start = 1001
test_end = 20000
batch_size = 100
batch_shift = 1
n_step_ahead = 1
m_steps_pred = 1
n_features = len(feature_to_input)
lstm_scope_name = 'lstm_prediction'
n_lstm_layers = 1
n_pred_class = 1
learning_rate = 0.1
EPOCHS = 1000
PRINT_STEP = 100
read_data_pd = pd.read_csv('./stock_price.csv')
temp_pd = feature_scaling(input_pd[feature_to_scale],sacling_meathod)
input_pd[feature_to_scale] = temp_pd
train_input_temp_pd = input_pd[feature_to_input]
train_input_nparr = input_reshape(train_input_temp_pd,
train_start, train_end, batch_size, batch_shift, n_features)
train_target_temp_pd = input_pd[feature_to_predict]
train_target_nparr = target_reshape(train_target_temp_pd, train_start, train_end, batch_size, batch_shift, n_step_ahead, m_steps_pred)
test_input_temp_pd = input_pd[feature_to_input]
test_input_nparr = input_reshape(test_input_temp_pd, test_start, test_end, batch_size, batch_shift, n_features)
test_target_temp_pd = input_pd[feature_to_predict]
test_target_nparr = target_reshape(test_target_temp_pd, test_start, test_end, batch_size, batch_shift, n_step_ahead, m_steps_pred)
tf.reset_default_graph()
x_ = tf.placeholder(tf.float32, [None, batch_size, n_features])
y_ = tf.placeholder(tf.float32, [None, 1])
lstm_output = lstm(x_, n_features, batch_size, n_lstm_layers, lstm_scope_name)
W = tf.Variable(tf.random_normal([n_features, n_pred_class]))
b = tf.Variable(tf.random_normal([n_pred_class]))
y = tf.matmul(lstm_output, W) + b
cost_func = tf.reduce_mean(tf.square(y - y_))
train_op = tf.train.GradientDescentOptimizer(learning_rate).minimize(cost_func)
optimizer = tf.train.GradientDescentOptimizer(learning_rate).minimize(loss, global_step=global_step)
init = tf.initialize_all_variables()
with tf.Session() as sess:
sess.run(init)
for ii in range(EPOCHS):
sess.run(train_op, feed_dict={x_:train_input_nparr, y_:train_target_nparr})
if ii % PRINT_STEP == 0:
cost = sess.run(cost_func, feed_dict={x_:train_input_nparr, y_:train_target_nparr})
print 'iteration =', ii, 'training cost:', cost
Very simply, prediction (a.k.a. scoring or inference) comes from running the input through only the forward pass, and collecting the score for each input vector. It's the same process flow as testing. The difference is the four stages of model use:
Train: learn from the training data set; adjust weights as needed.
Test: evaluate the model's performance; if accuracy has converged, stop training.
Validate: evaluate the accuracy of the trained model. If it doesn't meet acceptance criteria, change something and start over with the training.
Predict: you've passed validation -- release the model for use by the intended application.
All four steps follow the same forward logic flow; training includes back-propagation; the others do not. Simply follow the forward-only process, and you'll get the result form you need.
I worry about your data partition: only 10% for training, 90% for testing, and none for validation. A more typical split is 50-30-20, or something in that general area.
Q-1 : You should change your LSTM parameter to return a sequence of size two which will be prediction for that day and the day after.
Q-2 it's clearly that your model is underfitting the data, which is so obvious with your 10% train 90% test data ! You should more equilibrated ratio as suggested in the previous answer.