I need to install graph-tool from source, so I add in my Dockerfile this:
FROM ubuntu:18.04
RUN git clone https://git.skewed.de/count0/graph-tool.git
RUN cd graph-tool && ./configure && make && make install
as it written here.
When I try to build my Docker-compose I catch a error:
/bin/sh: 1: ./configure: not found
What am I doing wrong? Thanks!
ADDED Full Dockerfile:
FROM ubuntu:16.04
ENV LANG C.UTF-8
ENV PYTHONUNBUFFERED 1
ENV C_FORCE_ROOT true
# Install dependencies
RUN apt-get update \
&& apt-get install -y git \
&& apt-get install -y python3-pip python3-dev \
&& apt-get install -y binutils libproj-dev gdal-bin \
&& cd /usr/local/bin \
&& ln -s /usr/bin/python3 python \
&& pip3 install --upgrade pip
RUN git clone https://git.skewed.de/count0/graph-tool.git
RUN apt-get update && apt-get install -y gcc
RUN apt-get update && apt-get install -y libboost-all-dev
RUN apt update && apt install -y --no-install-recommends \
make \
build-essential \
g++
RUN cd graph-tool && ./configure && make && make install
# Project specific setups
RUN mkdir /code
WORKDIR /code
ADD . /code
RUN pip3 install -r requirements.txt
You need to run autogen.sh first, it will generate configure file
P.S. Make sure you install libtool
apt-get install libtool
You have to install the prerequisites first.
RUN apt update && apt install -y --no-install-recommends \
make \
build-essential \
g++ \
....
Don't forget to clean up and remove temp/unnecessary files!
Related
I am trying to build an extension of an existing image with FROM and then apt install additional packages on top and do own customizations. I get permission denied and "are you root" messages. Specifically, this is the image I want to extend:
https://hub.docker.com/r/makarius/isabelle
My Dockerfile:
FROM makarius/isabelle:latest
SHELL ["/bin/bash", "-c"]
# Add dependencies
RUN apt-get update && \
apt-get install --yes build-essential && \
apt-get install --yes openjdk-8-jdk && \
apt-get install --yes xterm && \
apt-get install --yes iputils-ping && \
apt-get install --yes vim && \
apt-get install --yes net-tools && \
apt-get -y install xauth && \
apt-get clean
# user
RUN useradd -m foo && (echo foo:foo | chpasswd)
USER foo
# Setup FOO repository
WORKDIR /home/foo
# ... some commands
ENTRYPOINT ["/bin/bash"]
Building it it seems I can't get the ability to install anything. There is no sudo in the image.
root#ub18:/home/x/foo/bar# sudo docker build -t i8:01 -f Dockerfile .
Sending build context to Docker daemon 408.7MB
Step 1/9 : FROM makarius/isabelle:latest
---> da948b0dd494
Step 2/9 : SHELL ["/bin/bash", "-c"]
---> Using cache
---> 64f897ae98ea
Step 3/9 : RUN apt-get update && apt-get install --yes build-essential && apt-get install --yes openjdk-8-jdk && apt-get install --yes xterm && apt-get install --yes iputils-ping && apt-get install --yes vim && apt-get install --yes net-tools && apt-get -y install xauth && apt-get clean
---> Running in 9ec12ecb98e8
Reading package lists...
E: Could not open lock file /var/lib/apt/lists/lock - open (13: Permission denied)
E: Unable to lock directory /var/lib/apt/lists/
The command '/bin/bash -c apt-get update && apt-get install --yes build-essential && apt-get install --yes openjdk-8-jdk && apt-get install --yes xterm && apt-get install --yes iputils-ping && apt-get install --yes vim && apt-get install --yes net-tools && apt-get -y install xauth && apt-get clean' returned a non-zero code: 100
I expect to be able to build the extended image from the existing one, with two users defined and all packages installed. I can get by with a single user as well if have to.
The parent image markarius/isabelle switched user to isabelle, you gotta switch it back to root to run apt-get with additional line USER root before that line in your docker file. There's no need to use sudo in docker images since by default you already have root access.
I'm buildinga a docker image using a Dockerfile to build it. I have put ARG DEBIAN_FRONTEND=noninteractive in the beginning of the Dockerfile to avoid debconf warnings while building.
The warnings does not show up when using apt-get install inside the Dockerfile. However when executing a sh script (install_dependencies.sh) from the Dockerfile that contains apt-get install commands, the warnings show up again. I also tried to set DEBIAN_FRONTEND=noninteractive inside the sh script itself.
I can solve this by adding echo 'debconf debconf/frontend select Noninteractive' | sudo debconf-set-selections in the sh script before the apt-get install commands but I would want to avoid that, since any fail in the script would leave debconf select to Noninteractive.
Dockerfile:
FROM ubuntu:18.04
# Avoid warnings by switching to noninteractive
ARG DEBIAN_FRONTEND=noninteractive
WORKDIR /tmp
# Configure APT --> HERE THE WARNINGS 'debconf: unable to initialize frontend: Dialog' ARE NOT DISPLAYED
RUN apt-get update \
&& apt-get -y upgrade \
&& apt-get install -y \
apt-utils \
dialog \
fakeroot \
software-properties-common \
2>&1
# Install APT packages --> HERE THE WARNINGS 'debconf: unable to initialize frontend: Dialog' ARE NOT DISPLAYED
RUN apt-get update && apt-get install -y \
#
# System packages
iproute2 \
procps \
lsb-release \
sudo \
unattended-upgrades \
dnsutils \
iputils-ping \
xauth \
openssl \
tar \
zip \
#
# Helpers
&& apt-get install -y \
ca-certificates \
curl \
wget \
lsof \
gconf2 \
gconf-service \
#
# Clean up
&& apt-get autoremove -y \
&& apt-get clean -y \
&& rm -rf /var/lib/apt/lists/*
# Install LTE stack dependencies --> HERE THE WARNINGS 'debconf: unable to initialize frontend: Dialog' ARE DISPLAYED
RUN chmod +x install_dependencies.sh \
&& export DEBIAN_FRONTEND=noninteractive; ./install_dependencies.sh
install_dependencies.sh:
#!/bin/sh
export DEBIAN_FRONTEND=noninteractive
APT_PACKAGES="lib32z1 \
python-setuptools \
libmysqlclient-dev \
ninja-build"
install_apt_packages() {
sudo apt-get install -y tzdata \
build-essential \
git
for package in $APT_PACKAGES;
do
sudo apt-get -y install "$package";
done
}
main() {
sudo apt-get update && sudo apt-get upgrade -y
install_apt_packages
}
main
EDIT: Thanks to #arkadiusz-drabczyk for telling me to remove sudo from the apt-get commands, it makes perfect sense what he says, that the environment variables drop before executing the command.
Drop sudo in your script, there is point to use it if you're running as root. This is also the reason that DEBIAN_FRONTEND has no effect - sudo drops your current user's environment for security reasons, you'd have to use with -E option to make it work.
I have the below dockerfile that needs to run a owasp bash file for its intallation.
This .sh file needs multiple inputs(like 1, Y, enter) from the user for the completion of installation.
How do I provide these inputs from dockerfile or is there a way to skip these inputs and continue the installation.
This dockerfile is a part of the docker-compose.
Below is thew dockerfile
FROM ubuntu:20.04
RUN apt-get update && apt-get upgrade -y && apt-get clean
RUN apt-get install python3-pip -y
RUN apt-get install vim -y
ARG DEBIAN_FRONTEND=noninteractive
ENV TZ=Indian
# Install OpenJDK-8
RUN apt-get install -y openjdk-8-jdk && \
apt-get install -y ant && \
apt-get clean;
# Fix certificate issues
RUN apt-get update && \
apt-get install ca-certificates-java && \
apt-get clean && \
update-ca-certificates -f
ENV JAVA_HOME /usr/lib/jvm/java-8-openjdk-amd64/
RUN export JAVA_HOME
RUN apt-get install wget -y && \
apt-get install unzip -y && \
apt-get install zip -y
RUN mkdir /home/owasp
RUN wget -c https://github.com/zaproxy/zaproxy/releases/download/v2.11.0/ZAP_2_11_0_unix.sh -P /home/owasp
RUN chmod u+x /home/owasp/ZAP_2_11_0_unix.sh
RUN ./home/owasp/ZAP_2_11_0_unix.sh
Use the Linux Package : https://github.com/zaproxy/zaproxy/releases/download/v2.11.0/ZAP_2.11.0_Linux.tar.gz
That has the same contents but is just a gziped tar file :)
Full list of ZAP downloads available is on https://www.zaproxy.org/download/
Or you can always extend our docker images https://www.zaproxy.org/docs/docker/
To provide input for command use some input generator and pipe it with your command.
Typical example is using command yes which provides endless stream of "y" on output:
RUN yes|./own-shell-scrpit.sh
You can run printf 'y\n1abc\nxxx' and pipe it. "\n" in printf states for newline (or enter).
I would suggest adding a ENTRYPOINT so it by default will invoke your bash script, but it gives the flexibily to the end user to pass different arguments. See the official docs. Keep in mind the CMD provided in a Dockerfile is a default command. You override it by passing any other value.
FROM ubuntu:20.04
ENV DEBIAN_FRONTEND=noninteractive
ENV TZ=Indian
RUN apt-get update && apt-get upgrade -y && apt-get clean
RUN apt-get install python3-pip -y
RUN apt-get install vim -y
# Install OpenJDK-8
RUN apt-get install -y openjdk-8-jdk && \
apt-get install -y ant && \
apt-get clean;
# Fix certificate issues
RUN apt-get update && \
apt-get install ca-certificates-java && \
apt-get clean && \
update-ca-certificates -f
ENV JAVA_HOME /usr/lib/jvm/java-8-openjdk-amd64/
RUN export JAVA_HOME
RUN apt-get install wget -y && \
apt-get install unzip -y && \
apt-get install zip -y
RUN mkdir /home/owasp
RUN wget -c https://github.com/zaproxy/zaproxy/releases/download/v2.11.0/ZAP_2_11_0_unix.sh -P /home/owasp
RUN chmod u+x /home/owasp/ZAP_2_11_0_unix.sh
ENTRYPOINT ./home/owasp/ZAP_2_11_0_unix.sh
CMD ['--some', '--default', '--args']
You can even choose to pass default flags on build. So your script will then always run with default flags you provided on docker build --build-args DEFAULT_PARAMS=--foo, unless you override it:
ARGS DEFAULT_PARAMS
FROM ubuntu:20.04
ENV DEFAULT_PARAMS=${DEFAULT_PARAMS}
ENV DEBIAN_FRONTEND=noninteractive
ENV TZ=Indian
RUN apt-get update && apt-get upgrade -y && apt-get clean
RUN apt-get install python3-pip -y
RUN apt-get install vim -y
# Install OpenJDK-8
RUN apt-get install -y openjdk-8-jdk && \
apt-get install -y ant && \
apt-get clean;
# Fix certificate issues
RUN apt-get update && \
apt-get install ca-certificates-java && \
apt-get clean && \
update-ca-certificates -f
ENV JAVA_HOME /usr/lib/jvm/java-8-openjdk-amd64/
RUN export JAVA_HOME
RUN apt-get install wget -y && \
apt-get install unzip -y && \
apt-get install zip -y
RUN mkdir /home/owasp
RUN wget -c https://github.com/zaproxy/zaproxy/releases/download/v2.11.0/ZAP_2_11_0_unix.sh -P /home/owasp
RUN chmod u+x /home/owasp/ZAP_2_11_0_unix.sh
ENTRYPOINT ./home/owasp/ZAP_2_11_0_unix.sh
CMD ${DEFAULT_PARAMS}
I'm stuck in getting Julia to run on Ubuntu 16.04 on a server having GPUs. Basically we want to utilise power of GPUs.
We're using Docker image to host Julia, it's pulled from nvidia-cuda, the docker image is building successfully, but when I run julia with any switch e.g. julia -v or just julia, I'm getting error ERROR: Unable to find compatible target in system image. I tried finding hints online but no luck, hence posting question here.
After building docker image, I'm running using docker run command by mounting some shared folders, it's coming up successfully, but Julia doesn't seem to work. Please let me know what wrong am I doing here.
Following is Dockerfile code
FROM nvidia/cuda:9.0-cudnn7-devel-ubuntu16.04
MAINTAINER comafire <comafire#gmail.com>
# Bash
RUN rm /bin/sh && ln -s /bin/bash /bin/sh
USER root
ENV DEBIAN_FRONTEND noninteractive
RUN apt-get update && apt-get install -y --no-install-recommends \
apt-utils \
&& apt-get clean && rm -rf /var/lib/apt/lists/*
# Lang
ARG locale="en_US.UTF-8"
ENV LOCALE ${locale}
RUN echo "LOCALE: $LOCALE"
RUN if [[ $LOCALE = *en* ]] \
; then \
apt-get update && apt-get install -y --no-install-recommends \
locales language-pack-en \
; else \
apt-get update && apt-get install -y --no-install-recommends \
locales language-pack-en \
; fi
RUN echo "$LOCALE UTF-8" > /etc/locale.gen && locale-gen
ENV LC_ALL ${LOCALE}
ENV LANG ${LOCALE}
ENV LANGUAGE ${LOCALE}
ENV LC_MESSAGES POSIX
# Common
RUN apt-get update && apt-get install -y --no-install-recommends \
build-essential vim curl wget git cmake bzip2 sudo unzip net-tools \
libffi-dev libssl-dev zlib1g-dev libbz2-dev libreadline-dev libsqlite3-dev llvm \
libfreetype6-dev libxft-dev
RUN apt-get update && apt-get install -y --no-install-recommends \
software-properties-common libjpeg-dev libpng-dev ncurses-dev imagemagick \
libgraphicsmagick1-dev libzmq-dev gfortran gnuplot gnuplot-x11 libsdl2-dev \
openssh-client htop iputils-ping
# Python2
RUN apt-get update && apt-get install -y --no-install-recommends \
python python-dev python-pip python-virtualenv python-software-properties
RUN pip2 install --upgrade pip
RUN pip2 install --cache-dir /tmp/pip2 --upgrade setuptools wheel
# Python3
RUN apt-get update && apt-get install -y --no-install-recommends \
python3 python3-dev python3-pip python3-virtualenv python3-software-properties
RUN pip3 install --upgrade pip
RUN pip3 install --cache-dir /tmp/pip3 --upgrade setuptools wheel
# Julia
ENV JULIA_VERSION 1.0.2
RUN apt-get update && apt-get install -y build-essential libatomic1 python gfortran perl wget m4 cmake pkg-config
RUN cd /usr/local && git clone git://github.com/JuliaLang/julia.git && cd julia && git checkout v${JULIA_VERSION}
#RUN make -C deps distclean-llvm && make
RUN cd /usr/local/julia && make -j4
RUN sudo ln -s /usr/local/julia/usr/bin/julia /usr/local/bin/julia
RUN /usr/local/julia/usr/bin/julia -v
RUN ls -al /usr/local/bin
RUN julia -v
WORKDIR /tmp
COPY packages.jl ./
RUN julia packages.jl
When executing RUN julia is julia already in your $PATH? Try executing julia directly, for example:
RUN chmod +x /path/to/julia
RUN /path/to/julia
im trying to copy jenkins-cli-wrapper.sh to a directory
but im getting the following error.
my code is given below
`
FROM ubuntu:14.04
RUN apt-get update && \
apt-get upgrade -y && \
apt-get install -y software-properties-common && \
add-apt-repository ppa:webupd8team/java -y && \
apt-get update && \
echo oracle-java7-installer shared/accepted-oracle-license-v1-1 select true | /usr/bin/debconf-set-selections && \
apt-get install -f -y oracle-java9-installer && \
apt install -y default-jre curl wget git nano; \
apt-get clean
ENV JAVA_HOME /usr
ENV PATH $JAVA_HOME/bin:$PATH
WORKDIR /jenkins-cli
COPY jenkins-cli-wrapper.sh .
ENV JENKINS_URL "localhost:8080"
ENV PRIVATE_KEY "/ssh/id_rsa"
VOLUME /ssh
ENTRYPOINT ["./jenkins-cli-wrapper.sh"]
CMD ["help"]`
****also when i ever i try to use "ADD" and "COPY" im getting this error in every other code****