Bug with Spring Cloud Dataflow Container Task Deployment? - spring-cloud-dataflow

Version : spring-cloud-dataflow-server-yarn-1.2.2.RELEASE
Issue : All OOTB / Custom Task Apps seem to be NOT working with Yarn Deployer (I Specifically tested with timestamp-task-1.3.0.RELEASE and a hello world Custom Task built per the reference doc).
We have a Yarn cluster where all the streams that we have deployed are running fine which rules out any issue with hadoop/yarn cluster. The moment we try to deploy a task, the task exits with code 0 with below message logged in Yarn Container/AppMaster stdout
2018-09-19 18:04:20.782 DEBUG 22625 --- [ask-scheduler-2] o.s.yarn.am.allocate.AbstractAllocator : completed container: container_1536919363436_0805_01_000002 with status=ContainerStatus: [ContainerId: container_1536919363436_0805_01_000002, State: COMPLETE, Diagnostics: Exception from container-launch.
Container id: container_1536919363436_0805_01_000002
Exit code: 1
Stack trace: ExitCodeException exitCode=1:
at org.apache.hadoop.util.Shell.runCommand(Shell.java:545)
at org.apache.hadoop.util.Shell.run(Shell.java:456)
at org.apache.hadoop.util.Shell$ShellCommandExecutor.execute(Shell.java:722)
at org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor.launchContainer(DefaultContainerExecutor.java:211)
at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:302)
at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:82)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Container exited with a non-zero exit code 1
, ExitStatus: 1, ]
Full AppMaster Log can be found here and corresponding servers.yml can be found here
Any help is Appreciated.

I am answering my own question -- our yarn server had log aggregation enabled and hence container logs weren't displayed immediately and I had to grep through the aggregated logs to find out why custom tasks weren't launching. Once we (temporarily) disabled log aggregation in yarn, custom task's Container.stdout and Container.stderror were visible under log directory configured in yarn-site.xml

Related

jib gradle plugin + static docker client: cannot build image due to permission error: layer.tar: A required privilege is not held by the client

I want to build Docker image with jib Gradle plugin in Windows, and use a Windows docker client to load it into my WSL 2 container running dockerd, and use WSL 2 as server. Resource-wise I think this is the lightest solution. .
On WSL 2 side, I run dockerd service in Ubuntu 20 on WSL 2, and it's listening on [::]:2375. TLS disabled(--tls=false), only http.
On Windows side, I only downloaded the Docker client(static client, from https://download.docker.com/win/static/stable/x86_64/), and added the dynamic WSL 2 container IP into the insecure-registry in daemon.json. This file is put in the same dir of docker.exe client.
On Intellij IDEA side, I use gradle 5.2.1 wrapper, and jib plugin 3.2.1. I configure jib as follows:
jib {
dockerClient.executable = 'E:\\coding\\environment\\docker\\docker.exe'
dockerClient.environment = [ DOCKER_HOST: '172.21.169.180:2375',
DOCKER_INSECURE_REGISTRIES: "172.21.169.180:5000"]
from.image = 'docker://mini/java#sha256:d3ded1fd0df592c33185d930d976304994bbc539c7bf70a6091cb3da0f7e11fa'
to.image = 'spring-plugins-demo'
container.mainClass = 'dev.westerngun.oldway.ApplicationV1'
}
I know it can connect to dockerd in my WSL 2, because before I add the dynamic IP of Ubuntu the error was not able to connect to daemon. Now it can load the base image and start building.
Then, when I run jibDockerBuild --stacktrace, I see this error:
Execution failed for task ':jibDockerBuild'.
> com.google.cloud.tools.jib.plugins.common.BuildStepsExecutionException: C:\Users\WESTER~1\AppData\Local\Temp\16164656866093264693\33e3f3775358985441c3bea658f06f5307326c83f9c0bcbf8aa4acb327abffde\layer.tar: �ͻ���û���������Ȩ��
* Try:
Run with --info or --debug option to get more log output. Run with --scan to get full insights.
* Exception is:
org.gradle.api.tasks.TaskExecutionException: Execution failed for task ':jibDockerBuild'.
at org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter$2.accept(ExecuteActionsTaskExecuter.java:121)
at org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter$2.accept(ExecuteActionsTaskExecuter.java:117)
at org.gradle.internal.Try$Failure.ifSuccessfulOrElse(Try.java:184)
at org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter.execute(ExecuteActionsTaskExecuter.java:110)
at org.gradle.api.internal.tasks.execution.ResolveIncrementalChangesTaskExecuter.execute(ResolveIncrementalChangesTaskExecuter.java:84)
at org.gradle.api.internal.tasks.execution.ResolveTaskOutputCachingStateExecuter.execute(ResolveTaskOutputCachingStateExecuter.java:91)
at org.gradle.api.internal.tasks.execution.ResolveBeforeExecutionStateTaskExecuter.execute(ResolveBeforeExecutionStateTaskExecuter.java:74)
at org.gradle.api.internal.tasks.execution.ValidatingTaskExecuter.execute(ValidatingTaskExecuter.java:58)
at org.gradle.api.internal.tasks.execution.SkipEmptySourceFilesTaskExecuter.execute(SkipEmptySourceFilesTaskExecuter.java:109)
at org.gradle.api.internal.tasks.execution.ResolveBeforeExecutionOutputsTaskExecuter.execute(ResolveBeforeExecutionOutputsTaskExecuter.java:67)
at org.gradle.api.internal.tasks.execution.ResolveAfterPreviousExecutionStateTaskExecuter.execute(ResolveAfterPreviousExecutionStateTaskExecuter.java:46)
at org.gradle.api.internal.tasks.execution.CleanupStaleOutputsExecuter.execute(CleanupStaleOutputsExecuter.java:93)
at org.gradle.api.internal.tasks.execution.FinalizePropertiesTaskExecuter.execute(FinalizePropertiesTaskExecuter.java:45)
at org.gradle.api.internal.tasks.execution.ResolveTaskExecutionModeExecuter.execute(ResolveTaskExecutionModeExecuter.java:94)
at org.gradle.api.internal.tasks.execution.SkipTaskWithNoActionsExecuter.execute(SkipTaskWithNoActionsExecuter.java:57)
at org.gradle.api.internal.tasks.execution.SkipOnlyIfTaskExecuter.execute(SkipOnlyIfTaskExecuter.java:56)
at org.gradle.api.internal.tasks.execution.CatchExceptionTaskExecuter.execute(CatchExceptionTaskExecuter.java:36)
at org.gradle.api.internal.tasks.execution.EventFiringTaskExecuter$1.executeTask(EventFiringTaskExecuter.java:63)
at org.gradle.api.internal.tasks.execution.EventFiringTaskExecuter$1.call(EventFiringTaskExecuter.java:49)
at org.gradle.api.internal.tasks.execution.EventFiringTaskExecuter$1.call(EventFiringTaskExecuter.java:46)
at org.gradle.internal.operations.DefaultBuildOperationExecutor$CallableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:416)
at org.gradle.internal.operations.DefaultBuildOperationExecutor$CallableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:406)
at org.gradle.internal.operations.DefaultBuildOperationExecutor$1.execute(DefaultBuildOperationExecutor.java:165)
at org.gradle.internal.operations.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:250)
at org.gradle.internal.operations.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:158)
at org.gradle.internal.operations.DefaultBuildOperationExecutor.call(DefaultBuildOperationExecutor.java:102)
at org.gradle.internal.operations.DelegatingBuildOperationExecutor.call(DelegatingBuildOperationExecutor.java:36)
at org.gradle.api.internal.tasks.execution.EventFiringTaskExecuter.execute(EventFiringTaskExecuter.java:46)
at org.gradle.execution.plan.LocalTaskNodeExecutor.execute(LocalTaskNodeExecutor.java:43)
at org.gradle.execution.taskgraph.DefaultTaskExecutionGraph$InvokeNodeExecutorsAction.execute(DefaultTaskExecutionGraph.java:355)
at org.gradle.execution.taskgraph.DefaultTaskExecutionGraph$InvokeNodeExecutorsAction.execute(DefaultTaskExecutionGraph.java:343)
at org.gradle.execution.taskgraph.DefaultTaskExecutionGraph$BuildOperationAwareExecutionAction.execute(DefaultTaskExecutionGraph.java:336)
at org.gradle.execution.taskgraph.DefaultTaskExecutionGraph$BuildOperationAwareExecutionAction.execute(DefaultTaskExecutionGraph.java:322)
at org.gradle.execution.plan.DefaultPlanExecutor$ExecutorWorker$1.execute(DefaultPlanExecutor.java:134)
at org.gradle.execution.plan.DefaultPlanExecutor$ExecutorWorker$1.execute(DefaultPlanExecutor.java:129)
at org.gradle.execution.plan.DefaultPlanExecutor$ExecutorWorker.execute(DefaultPlanExecutor.java:202)
at org.gradle.execution.plan.DefaultPlanExecutor$ExecutorWorker.executeNextNode(DefaultPlanExecutor.java:193)
at org.gradle.execution.plan.DefaultPlanExecutor$ExecutorWorker.run(DefaultPlanExecutor.java:129)
at org.gradle.internal.concurrent.ExecutorPolicy$CatchAndRecordFailures.onExecute(ExecutorPolicy.java:63)
at org.gradle.internal.concurrent.ManagedExecutorImpl$1.run(ManagedExecutorImpl.java:46)
at org.gradle.internal.concurrent.ThreadFactoryImpl$ManagedThreadRunnable.run(ThreadFactoryImpl.java:55)
Caused by: org.gradle.internal.UncheckedException: com.google.cloud.tools.jib.plugins.common.BuildStepsExecutionException: C:\Users\WESTER~1\AppData\Local\Temp\16164656866093264693\33e3f3775358985441c3bea658f06f5307326c83f9c0bcbf8aa4acb327abffde\layer.tar: �ͻ���û���������Ȩ��
at org.gradle.internal.UncheckedException.throwAsUncheckedException(UncheckedException.java:67)
at org.gradle.internal.UncheckedException.throwAsUncheckedException(UncheckedException.java:41)
at org.gradle.internal.reflect.JavaMethod.invoke(JavaMethod.java:106)
at org.gradle.api.internal.project.taskfactory.StandardTaskAction.doExecute(StandardTaskAction.java:48)
at org.gradle.api.internal.project.taskfactory.StandardTaskAction.execute(StandardTaskAction.java:41)
at org.gradle.api.internal.project.taskfactory.StandardTaskAction.execute(StandardTaskAction.java:28)
at org.gradle.api.internal.AbstractTask$TaskActionWrapper.execute(AbstractTask.java:705)
at org.gradle.api.internal.AbstractTask$TaskActionWrapper.execute(AbstractTask.java:672)
at org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter$4.run(ExecuteActionsTaskExecuter.java:338)
at org.gradle.internal.operations.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:402)
at org.gradle.internal.operations.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:394)
at org.gradle.internal.operations.DefaultBuildOperationExecutor$1.execute(DefaultBuildOperationExecutor.java:165)
at org.gradle.internal.operations.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:250)
at org.gradle.internal.operations.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:158)
at org.gradle.internal.operations.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:92)
at org.gradle.internal.operations.DelegatingBuildOperationExecutor.run(DelegatingBuildOperationExecutor.java:31)
at org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter.executeAction(ExecuteActionsTaskExecuter.java:327)
at org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter.executeActions(ExecuteActionsTaskExecuter.java:312)
at org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter.access$200(ExecuteActionsTaskExecuter.java:75)
at org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter$TaskExecution.execute(ExecuteActionsTaskExecuter.java:158)
at org.gradle.internal.execution.impl.steps.ExecuteStep.execute(ExecuteStep.java:46)
at org.gradle.internal.execution.impl.steps.CancelExecutionStep.execute(CancelExecutionStep.java:34)
at org.gradle.internal.execution.impl.steps.TimeoutStep.executeWithoutTimeout(TimeoutStep.java:69)
at org.gradle.internal.execution.impl.steps.TimeoutStep.execute(TimeoutStep.java:49)
at org.gradle.internal.execution.impl.steps.CatchExceptionStep.execute(CatchExceptionStep.java:34)
at org.gradle.internal.execution.impl.steps.CreateOutputsStep.execute(CreateOutputsStep.java:49)
at org.gradle.internal.execution.impl.steps.SnapshotOutputStep.execute(SnapshotOutputStep.java:42)
at org.gradle.internal.execution.impl.steps.SnapshotOutputStep.execute(SnapshotOutputStep.java:28)
at org.gradle.internal.execution.impl.steps.CacheStep.executeWithoutCache(CacheStep.java:133)
at org.gradle.internal.execution.impl.steps.CacheStep.lambda$execute$5(CacheStep.java:83)
at org.gradle.internal.execution.impl.steps.CacheStep.execute(CacheStep.java:82)
at org.gradle.internal.execution.impl.steps.CacheStep.execute(CacheStep.java:37)
at org.gradle.internal.execution.impl.steps.PrepareCachingStep.execute(PrepareCachingStep.java:33)
at org.gradle.internal.execution.impl.steps.StoreSnapshotsStep.execute(StoreSnapshotsStep.java:38)
at org.gradle.internal.execution.impl.steps.StoreSnapshotsStep.execute(StoreSnapshotsStep.java:23)
at org.gradle.internal.execution.impl.steps.SkipUpToDateStep.executeBecause(SkipUpToDateStep.java:95)
at org.gradle.internal.execution.impl.steps.SkipUpToDateStep.lambda$execute$0(SkipUpToDateStep.java:88)
at org.gradle.internal.execution.impl.steps.SkipUpToDateStep.execute(SkipUpToDateStep.java:52)
at org.gradle.internal.execution.impl.steps.SkipUpToDateStep.execute(SkipUpToDateStep.java:36)
at org.gradle.internal.execution.impl.DefaultWorkExecutor.execute(DefaultWorkExecutor.java:34)
at org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter.execute(ExecuteActionsTaskExecuter.java:109)
... 37 more
Caused by: com.google.cloud.tools.jib.plugins.common.BuildStepsExecutionException: C:\Users\WESTER~1\AppData\Local\Temp\16164656866093264693\33e3f3775358985441c3bea658f06f5307326c83f9c0bcbf8aa4acb327abffde\layer.tar: �ͻ���û���������Ȩ��
at com.google.cloud.tools.jib.plugins.common.JibBuildRunner.runBuild(JibBuildRunner.java:285)
at com.google.cloud.tools.jib.gradle.BuildDockerTask.buildDocker(BuildDockerTask.java:126)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at org.gradle.internal.reflect.JavaMethod.invoke(JavaMethod.java:103)
... 75 more
Caused by: java.nio.file.FileSystemException: C:\Users\WESTER~1\AppData\Local\Temp\16164656866093264693\33e3f3775358985441c3bea658f06f5307326c83f9c0bcbf8aa4acb327abffde\layer.tar: �ͻ���û���������Ȩ��
at com.google.cloud.tools.jib.tar.TarExtractor.extract(TarExtractor.java:93)
at com.google.cloud.tools.jib.tar.TarExtractor.extract(TarExtractor.java:49)
at com.google.cloud.tools.jib.builder.steps.LocalBaseImageSteps.cacheDockerImageTar(LocalBaseImageSteps.java:217)
at com.google.cloud.tools.jib.builder.steps.LocalBaseImageSteps.lambda$retrieveDockerDaemonLayersStep$0(LocalBaseImageSteps.java:133)
at com.google.common.util.concurrent.TrustedListenableFutureTask$TrustedFutureInterruptibleTask.runInterruptibly(TrustedListenableFutureTask.java:131)
at com.google.common.util.concurrent.InterruptibleTask.run(InterruptibleTask.java:74)
at com.google.common.util.concurrent.TrustedListenableFutureTask.run(TrustedListenableFutureTask.java:82)
The error message in Chinese is
C:\Users\WESTER~1\AppData\Local\Temp\16164656866093264693\33e3f3775358985441c3bea658f06f5307326c83f9c0bcbf8aa4acb327abffde\layer.tar: 客户端没有所需的特权。
And I think it can be translated into "A required permission is not held by the client".
I suspect this is because my user is not added to docker-user group, as stated here. But, I uninstalled Docker toolbox and I don't see this group anymore, as it sets DOCKER_HOST and interferes with my setup. Secondly, I don't have Local Users and Group available, seems Windows 10 Home edition does not have it.
Should I try to install gpedit in my Home Edition, add the group and try? But without Docker toolbox, I doubt it would work. Docker documentation explains here that it creates the group and configure it to ensure separation of permissions between root/admin and non-root/non-admin users; I think only creating that group will not work. https://docs.docker.com/desktop/windows/permission-requirements/
But, when I use docker.exe to connect to WSL 2 and save a tar file to C:\Users\WESTER~1\AppData\Local\Temp, it works. The tar file is created and not corrupted. So I think it's not a permission error; anyone can access that dir.
Windows bundled bsd-tar.exe has nothing to do with it; renaming the tar.exe in System32 and build, the error is the same.
It is solved when I run cmd as admin and cd to project dir and do gradlew jibDockerBuild. Image built and loaded into WSL 2 daemon successfully. It is indeed file system permission error.
Although still very strange(as I allowed the permission to everyone on that folder), but at least this is one workaround.
Another workaround, even better:
As per https://github.com/microsoft/WSL/issues/4983, I changed the jib config to set docker host to be http://[::1]:2375, and suddenly it works. Seems only ipv6 is bind.
Now not only the host is reachable, even permission error disappears; no insecure_registries settings needed, neither.

tdb2.tdbcompact command line tool returns Failed to get a lock: file

I'm running apache-jena-fuseki-3.13-1 and just found tdb2.tdbcompact from its bin-directory. I should run tdb2.tdbcompact nightly to prevent my jena-fuseki from running out of disk space, but now I get error message( Failed to get a lock: file) when running it:
miettinj#ramen:~/jena> ./apache-jena-3.13.1/bin/tdb2.tdbcompact --loc=./apache-jena-fuseki- 3.13.1/run/databases/test_TDB2
org.apache.jena.dboe.DBOpEnvException: Failed to get a lock: file='/srv/work/miettinj/jena/apache-jena-fuseki-3.13.1/run/databases/test_TDB2/tdb.lock': held by process 6136
ps -x|grep 6136
6136 ? Sl 30:48 /usr/lib64/jvm/java/bin/java -Xmx1200M -cp /srv/work/miettinj/jena/apache-jena-fuseki-3.13.1/fuseki-server.jar
"held by process 6136"
Another process is using the database. Compaction has to happen from the process using the database.
Apache Jena Fuseki Jena 3.17.0 added a function endpoint so that the administrator can ask for compaction on a running Fuseki server.

weblogic.management.provider.EditWaitTimedOutException

I am currently using Jenkins 2.138.1, Oracle Weblogic 12c.
I tried to deploy the war file into Weblogic server by using Jenkins Weblogic Deployer Plugin.
The Jenkins Build will be triggered every midnight 3am.
Sometimes the build is success, but sometimes failed with the error below:
Deployment Plan: null
App root: null
App config: null
Deployment Options: {
isRetireGracefully=true,
isGracefulProductionToAdmin=false,
isGracefulIgnoreSessions=false,
rmiGracePeriod=-1,
retireTimeoutSecs=-1,
undeployAllVersions=false,
archiveVersion=null,
planVersion=null,
isLibrary=false,
libSpecVersion=null,
libImplVersion=null,
stageMode=null,
clusterTimeout=3600000,
altDD=null,
altWlsDD=null,
name=myapp,
securityModel=null,
securityValidationEnabled=false,
versionIdentifier=null,
isTestMode=false,
forceUndeployTimeout=0,
defaultSubmoduleTargets=true,
timeout=0,
deploymentPrincipalName=null,
useExpiredLock=false
}
[BasicOperation.execute():445] : Initiating undeploy operation for app,
myApp, on targets: [BasicOperation.execute():447] : MyMgdSvr1
weblogic.management.provider.EditWaitTimedOutException: Waited 0
milliseconds at weblogic.utils.StackTraceDisabled.unknownMethod()
I think I have found the solution, the issue is actually caused by it cannot obtain the edit lock from Weblogic admin server.
Therefore before I un-deploy and deploy the application, I overwritten the user lock so that my instance is able to obtain the lock.

Re-init a clean Gerrit but I want Gerrit to use my previous configuration settings

I've messed up my Gerrit installation. So I want to re-init Gerrit.
I tried to do:
java -jar gerrit-2.15.1.war init -d /my_gerrit_destination
and Gerrit asked if I wanted to use my previous settings. Perfect!
But.. I've messed up some file in the /index-folder so my initialization failed.
Is it possible to clean all or some of the directories/files and Gerrit will still ask me if I wanted to use same configurations as before?
I ask because the person that holds some of the used passwords in the config, is on vacation.
EDIT:
1.I removed the index directory.
2.I ran the above init command again.
3.Gerrit FAILED to start
4.Checked in the error.log and followed instructions about re-index some directories but got an error posted in error.log:
[2018-07-04 14:39:39,989] [main] WARN com.google.gerrit.sshd.SshDaemon : Cannot format SSHD host key [EdDSA]: invalid key type
[2018-07-04 14:39:40,006] [main] WARN com.google.gerrit.server.config.GitwebCgiConfig : gitweb not installed (no /usr/lib/cgi-bin/gitweb.cgi found)
[2018-07-04 14:39:41,069] [main] INFO org.eclipse.jetty.util.log : Logging initialized #11300ms
[2018-07-04 14:39:41,161] [main] INFO com.google.gerrit.server.git.LocalDiskRepositoryManager : Defaulting core.streamFileThreshold to 1339m
[2018-07-04 14:39:41,635] [main] INFO com.google.gerrit.server.plugins.PluginLoader : Loading plugins from /opt/gerrit/plugins
[2018-07-04 14:39:41,745] [main] ERROR com.google.gerrit.pgm.Daemon : Unable to start daemon
com.google.inject.ProvisionException: Unable to provision, see the following errors:
1) No index versions for index 'groups' ready; run java -jar /opt/gerrit/bin/gerrit.war reindex --index groups
1 error
at com.google.gerrit.server.index.VersionManager.initIndex(VersionManager.java:173)
at com.google.gerrit.server.index.VersionManager.start(VersionManager.java:94)
at com.google.gerrit.lifecycle.LifecycleManager.start(LifecycleManager.java:92)
at com.google.gerrit.pgm.Daemon.start(Daemon.java:349)
at com.google.gerrit.pgm.Daemon.run(Daemon.java:256)
at com.google.gerrit.pgm.util.AbstractProgram.main(AbstractProgram.java:61)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at com.google.gerrit.launcher.GerritLauncher.invokeProgram(GerritLauncher.java:223)
at com.google.gerrit.launcher.GerritLauncher.mainImpl(GerritLauncher.java:119)
at com.google.gerrit.launcher.GerritLauncher.main(GerritLauncher.java:63)
at Main.main(Main.java:24)
5.I tried to run java -jar /opt/gerrit/bin/gerrit.war reindex --index groups but I get
`fatal: not a Gerrit site: '.'
fatal: Perhaps you need to run init first?`
6.New init fails to start Gerrit.
1) Remove the index directory
rm -rf GERRIT-SITE/index
2) Run the reindex command
java -jar gerrit-VERSION.war reindex -d GERRIT-SITE

Flume NullPointerExceptions on checkpoint

I've setup a file to file source/sink , just as a test of basic flume functionality.
Im currently using the "exec" source, with the command being "tail -F mytmpfile".
In my script, I continuously echo "....." >> mytmpfile , so that the tail command constitutes a stream.
However, I've started seeing the following exception in the flume logs:
java.lang. IllegalStateException: Channel closed [channel=c1]. Due to
java.lang.NullPointerException: null
at org.apache.flume.channel.file.FileChannel.createTransaction(FileChannel.java:353)
at org.apache.flume.channel.BasicChannelSemantics.getTransaction(BasicChannelSemantics.java:122)
at org.apache.flume.sink.RollingFileSink.process(RollingFileSink.java:183)
at org.apache.flume.sink.DefaultSinkProcessor.process(DefaultSinkProcessor.java:68)
at org.apache.flume.SinkRunner$PollingRunner.run(SinkRunner.java:147)
at java.lang.Thread.run(Thread.java:662) Caused by: java.lang.NullPointerException
at org.apache.flume.channel.file.Log.writeCheckpoint(Log.java:895)
at org.apache.flume.channel.file.Log.replay(Log.java:406)
at org.apache.flume.channel.file.FileChannel.start(FileChannel.java:303)
at org.apache.flume.lifecycle.LifecycleSupervisor$MonitorRunnable.run(LifecycleSupervisor.java:236)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:439)
at java.util.concurrent.FutureTask$Sync.innerRunAndReset(FutureTask.java:317)
at java.util.concurrent.FutureTask.runAndReset(FutureTask.java:150)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$101(ScheduledThreadPoolExecutor.java:98)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.runPeriodic(ScheduledThreadPoolExecutor.java:180)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:204)
at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:895)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:918)
... 1 more
Any thoughts on where this NullPointerException is coming from? It appears from scanning the code that maybe it related to a missing folder or directory. But I cant find the exact line on the git hub branches.
This is using apache-flume-1.3.1.23-...
In the past I've had problems with file channels, and they've normally boiled down to two problems:
1) If you're running multiple agents on the same box, make sure you configure them to have separate dataDirs and checkpointDir.
2) On Linux boxes, check that your tmpfs isn't near its capacity. If it's getting full, flume will complain. Try stopping the flume agent, unmount tmpfs, enlarge it, remount and restart the agent.

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