Passing local CQL commands file to Cassandra Docker container - docker

Is it possible to pass a local file for CQL commands to a Cassandra Docker container?
Using docker exec fails as it cannot find the local file:
me#meanwhileinhell:~$ ls -al
-rw-r--r-- 1 me me 1672 Sep 28 11:02 createTables.cql
me#meanwhileinhell:~$ docker exec -i cassandra_1 cqlsh -f createTables.cql
Can't open 'createTables.cql': [Errno 2] No such file or directory: ‘createTables.cql'
I would really like not to have to open a bash session and run a script that way.

The container needs to be able to access the script first before you can execute it (i.e. the script file needs to be inside the container). If this is just a quick one-off run of the script, the easiest thing to do is probably to just use the docker cp command to copy the script from your host to the container:
$ docker cp createTables.cql container_name:/path/in/container
You should then be able to use docker exec to run the script at whatever path you copied it to inside the container. If this is something that's a work in progress and you might be changing and re-running the script while you're working on it, you might be better off mounting a directory with your scripts from your host inside the container. For that you'll probably want the -v option of docker run.
Hope that helps!

If you want docker container sees files in host system, the only way is to map volume. You can mapped current directory to /tmp and run command again docker exec -i cassandra_1 cqlsh -f /tmp/createTables.cql

Related

How to print the current directory of the docker image which is running in a centOS7 OS from windows docker desktop [duplicate]

I've noticed with docker that I need to understand what's happening inside a container or what files exist in there. One example is downloading images from the docker index - you don't have a clue what the image contains so it's impossible to start the application.
What would be ideal is to be able to ssh into them or equivalent. Is there a tool to do this, or is my conceptualisation of docker wrong in thinking I should be able to do this.
Here are a couple different methods...
A) Use docker exec (easiest)
Docker version 1.3 or newer supports the command exec that behave similar to nsenter. This command can run new process in already running container (container must have PID 1 process running already). You can run /bin/bash to explore container state:
docker exec -t -i mycontainer /bin/bash
see Docker command line documentation
B) Use Snapshotting
You can evaluate container filesystem this way:
# find ID of your running container:
docker ps
# create image (snapshot) from container filesystem
docker commit 12345678904b5 mysnapshot
# explore this filesystem using bash (for example)
docker run -t -i mysnapshot /bin/bash
This way, you can evaluate filesystem of the running container in the precise time moment. Container is still running, no future changes are included.
You can later delete snapshot using (filesystem of the running container is not affected!):
docker rmi mysnapshot
C) Use ssh
If you need continuous access, you can install sshd to your container and run the sshd daemon:
docker run -d -p 22 mysnapshot /usr/sbin/sshd -D
# you need to find out which port to connect:
docker ps
This way, you can run your app using ssh (connect and execute what you want).
D) Use nsenter
Use nsenter, see Why you don't need to run SSHd in your Docker containers
The short version is: with nsenter, you can get a shell into an
existing container, even if that container doesn’t run SSH or any kind
of special-purpose daemon
UPDATE: EXPLORING!
This command should let you explore a running docker container:
docker exec -it name-of-container bash
The equivalent for this in docker-compose would be:
docker-compose exec web bash
(web is the name-of-service in this case and it has tty by default.)
Once you are inside do:
ls -lsa
or any other bash command like:
cd ..
This command should let you explore a docker image:
docker run --rm -it --entrypoint=/bin/bash name-of-image
once inside do:
ls -lsa
or any other bash command like:
cd ..
The -it stands for interactive... and tty.
This command should let you inspect a running docker container or image:
docker inspect name-of-container-or-image
You might want to do this and find out if there is any bash or sh in there. Look for entrypoint or cmd in the json return.
NOTE: This answer relies on commen tool being present, but if there is no bash shell or common tools like ls present you could first add one in a layer if you have access to the Dockerfile:
example for alpine:
RUN apk add --no-cache bash
Otherwise if you don't have access to the Dockerfile then just copy the files out of a newly created container and look trough them by doing:
docker create <image> # returns container ID the container is never started.
docker cp <container ID>:<source_path> <destination_path>
docker rm <container ID>
cd <destination_path> && ls -lsah
see docker exec documentation
see docker-compose exec documentation
see docker inspect documentation
see docker create documentation
In case your container is stopped or doesn't have a shell (e.g. hello-world mentioned in the installation guide, or non-alpine traefik), this is probably the only possible method of exploring the filesystem.
You may archive your container's filesystem into tar file:
docker export adoring_kowalevski > contents.tar
Or list the files:
docker export adoring_kowalevski | tar t
Do note, that depending on the image, it might take some time and disk space.
Before Container Creation :
If you to explore the structure of the image that is mounted inside the container you can do
sudo docker image save image_name > image.tar
tar -xvf image.tar
This would give you the visibility of all the layers of an image and its configuration which is present in json files.
After container creation :
For this there are already lot of answers above. my preferred way to do
this would be -
docker exec -t -i container /bin/bash
The most upvoted answer is working for me when the container is actually started, but when it isn't possible to run and you for example want to copy files from the container this has saved me before:
docker cp <container-name>:<path/inside/container> <path/on/host/>
Thanks to docker cp (link) you can copy directly from the container as it was any other part of your filesystem.
For example, recovering all files inside a container:
mkdir /tmp/container_temp
docker cp example_container:/ /tmp/container_temp/
Note that you don't need to specify that you want to copy recursively.
The file system of the container is in the data folder of docker, normally in /var/lib/docker. In order to start and inspect a running containers file system do the following:
hash=$(docker run busybox)
cd /var/lib/docker/aufs/mnt/$hash
And now the current working directory is the root of the container.
you can use dive to view the image content interactively with TUI
https://github.com/wagoodman/dive
Try using
docker exec -it <container-name> /bin/bash
There might be possibility that bash is not implemented. for that you can use
docker exec -it <container-name> sh
On Ubuntu 14.04 running Docker 1.3.1, I found the container root filesystem on the host machine in the following directory:
/var/lib/docker/devicemapper/mnt/<container id>/rootfs/
Full Docker version information:
Client version: 1.3.1
Client API version: 1.15
Go version (client): go1.3.3
Git commit (client): 4e9bbfa
OS/Arch (client): linux/amd64
Server version: 1.3.1
Server API version: 1.15
Go version (server): go1.3.3
Git commit (server): 4e9bbfa
In my case no shell was supported in container except sh. So, this worked like a charm
docker exec -it <container-name> sh
I use another dirty trick that is aufs/devicemapper agnostic.
I look at the command that the container is running e.g. docker ps
and if it's an apache or java i just do the following:
sudo -s
cd /proc/$(pgrep java)/root/
and voilá you're inside the container.
Basically you can as root cd into /proc/<PID>/root/ folder as long as that process is run by the container. Beware symlinks will not make sense wile using that mode.
The most voted answer is good except if your container isn't an actual Linux system.
Many containers (especially the go based ones) don't have any standard binary (no /bin/bash or /bin/sh). In that case, you will need to access the actual containers file directly:
Works like a charm:
name=<name>
dockerId=$(docker inspect -f {{.Id}} $name)
mountId=$(cat /var/lib/docker/image/aufs/layerdb/mounts/$dockerId/mount-id)
cd /var/lib/docker/aufs/mnt/$mountId
Note: You need to run it as root.
Only for LINUX
The most simple way that I use was using proc dir, the container must be running in order to inspect the docker container files.
Find out the process id (PID) of the container and store it into some variable
PID=$(docker inspect -f '{{.State.Pid}}' your-container-name-here)
Make sure the container process is running, and use the variable name to get into the container folder
cd /proc/$PID/root
If you want to get through the dir without finding out the PID number, just use this long command
cd /proc/$(docker inspect -f '{{.State.Pid}}' your-container-name-here)/root
Tips:
After you get inside the container, everything you do will affect the actual process of the container, such as stopping the service or changing the port number.
Hope it helps
Note:
This method only works if the container is still running, otherwise, the directory wouldn't exist anymore if the container has stopped or removed
None of the existing answers address the case of a container that exited (and can't be restarted) and/or doesn't have any shell installed (e.g. distroless ones). This one works as long has you have root access to the Docker host.
For a real manual inspection, find out the layer IDs first:
docker inspect my-container | jq '.[0].GraphDriver.Data'
In the output, you should see something like
"MergedDir": "/var/lib/docker/overlay2/03e8df748fab9526594cfdd0b6cf9f4b5160197e98fe580df0d36f19830308d9/merged"
Navigate into this folder (as root) to find the current visible state of the container filesystem.
This will launch a bash session for the image:
docker run --rm -it --entrypoint=/bin/bash
On newer versions of Docker you can run docker exec [container_name] which runs a shell inside your container
So to get a list of all the files in a container just run docker exec [container_name] ls
I wanted to do this, but I was unable to exec into my container as it had stopped and wasn't starting up again due to some error in my code.
What worked for me was to simply copy the contents of the entire container into a new folder like this:
docker cp container_name:/app/ new_dummy_folder
I was then able to explore the contents of this folder as one would do with a normal folder.
For me, this one works well (thanks to the last comments for pointing out the directory /var/lib/docker/):
chroot /var/lib/docker/containers/2465790aa2c4*/root/
Here, 2465790aa2c4 is the short ID of the running container (as displayed by docker ps), followed by a star.
For docker aufs driver:
The script will find the container root dir(Test on docker 1.7.1 and 1.10.3 )
if [ -z "$1" ] ; then
echo 'docker-find-root $container_id_or_name '
exit 1
fi
CID=$(docker inspect --format {{.Id}} $1)
if [ -n "$CID" ] ; then
if [ -f /var/lib/docker/image/aufs/layerdb/mounts/$CID/mount-id ] ; then
F1=$(cat /var/lib/docker/image/aufs/layerdb/mounts/$CID/mount-id)
d1=/var/lib/docker/aufs/mnt/$F1
fi
if [ ! -d "$d1" ] ; then
d1=/var/lib/docker/aufs/diff/$CID
fi
echo $d1
fi
This answer will help those (like myself) who want to explore the docker volume filesystem even if the container isn't running.
List running docker containers:
docker ps
=> CONTAINER ID "4c721f1985bd"
Look at the docker volume mount points on your local physical machine (https://docs.docker.com/engine/tutorials/dockervolumes/):
docker inspect -f {{.Mounts}} 4c721f1985bd
=> [{ /tmp/container-garren /tmp true rprivate}]
This tells me that the local physical machine directory /tmp/container-garren is mapped to the /tmp docker volume destination.
Knowing the local physical machine directory (/tmp/container-garren) means I can explore the filesystem whether or not the docker container is running. This was critical to helping me figure out that there was some residual data that shouldn't have persisted even after the container was not running.
If you are using Docker v19.03, you follow the below steps.
# find ID of your running container:
docker ps
# create image (snapshot) from container filesystem
docker commit 12345678904b5 mysnapshot
# explore this filesystem
docker run -t -i mysnapshot /bin/sh
For an already running container, you can do:
dockerId=$(docker inspect -f {{.Id}} [docker_id_or_name])
cd /var/lib/docker/btrfs/subvolumes/$dockerId
You need to be root in order to cd into that dir. If you are not root, try 'sudo su' before running the command.
Edit: Following v1.3, see Jiri's answer - it is better.
another trick is to use the atomic tool to do something like:
mkdir -p /path/to/mnt && atomic mount IMAGE /path/to/mnt
The Docker image will be mounted to /path/to/mnt for you to inspect it.
My preferred way to understand what is going on inside container is:
expose -p 8000
docker run -it -p 8000:8000 image
Start server inside it
python -m SimpleHTTPServer
If you are using the AUFS storage driver, you can use my docker-layer script to find any container's filesystem root (mnt) and readwrite layer :
# docker-layer musing_wiles
rw layer : /var/lib/docker/aufs/diff/c83338693ff190945b2374dea210974b7213bc0916163cc30e16f6ccf1e4b03f
mnt : /var/lib/docker/aufs/mnt/c83338693ff190945b2374dea210974b7213bc0916163cc30e16f6ccf1e4b03f
Edit 2018-03-28 :
docker-layer has been replaced by docker-backup
The docker exec command to run a command in a running container can help in multiple cases.
Usage: docker exec [OPTIONS] CONTAINER COMMAND [ARG...]
Run a command in a running container
Options:
-d, --detach Detached mode: run command in the background
--detach-keys string Override the key sequence for detaching a
container
-e, --env list Set environment variables
-i, --interactive Keep STDIN open even if not attached
--privileged Give extended privileges to the command
-t, --tty Allocate a pseudo-TTY
-u, --user string Username or UID (format:
[:])
-w, --workdir string Working directory inside the container
For example :
1) Accessing in bash to the running container filesystem :
docker exec -it containerId bash
2) Accessing in bash to the running container filesystem as root to be able to have required rights :
docker exec -it -u root containerId bash
This is particularly useful to be able to do some processing as root in a container.
3) Accessing in bash to the running container filesystem with a specific working directory :
docker exec -it -w /var/lib containerId bash
Often times I only need to explore the docker filesystem because my build won't run, so docker run -it <container_name> bash is impractical. I also do not want to waste time and memory copying filesystems, so docker cp <container_name>:<path> <target_path> is impractical too.
While possibly unorthodox, I recommend re-building with ls as the final command in the Dockerfile:
CMD [ "ls", "-R" ]
I've found the easiest, all-in-one solution to View, Edit, Copy files with a GUI app inside almost any running container.
mc editing files in docker
inside the container install mc and ssh: docker exec -it <container> /bin/bash, then with prompt install mc and ssh packages
in same exec-bash console, run mc
press ESC then 9 then ENTER to open menu and select "Shell link..."
using "Shell link..." open SCP-based filesystem access to any host with ssh server running (including the one running docker) by it's IP address
do your job in graphical UI
this method overcomes all issues with permissions, snap isolation etc., allows to copy directly to any machine and is the most pleasant to use for me
I had an unknown container, that was doing some production workload and did not want to run any command.
So, I used docker diff.
This will list all files that the container had changed and therefore good suited to explore the container file system.
To get only a folder you can just use grep:
docker diff <container> | grep /var/log
It will not show files from the docker image. Depending on your use case this can help or not.
Late to the party, but in 2022 we have VS Code

Execute local shell script using docker run interactive

Can I execute a local shell script within a docker container using docker run -it ?
Here is what I can do:
$ docker run -it 5ee0b7440be5
bash-4.2# echo "Hello"
Hello
bash-4.2# exit
exit
I have a shell script on my local machine
hello.sh:
echo "Hello"
I would like to execute the local shell script within the container and read the value returned:
$ docker run -it 5e3337440be5 #Some way of passing a reference to hello.sh to the container.
Hello
A specific design goal of Docker is that you can't. A container can't access the host filesystem at all, except to the extent that an administrator explicitly mounts parts of the filesystem into the container. (See #tentative's answer for a way to do this for your use case.)
In most cases this means you need to COPY all of the scripts and support tools into your image. You can create a container running any command you want, and one typical approach is to set the image's CMD to do "the normal thing the container will normally do" (like run a Web server) but to allow running the container with a different command (an admin task, a background worker, ...).
# Dockerfile
FROM alpine
...
COPY hello.sh /usr/local/bin
...
EXPOSE 80
CMD httpd -f -h /var/www
docker build -t my/image .
docker run -d -p 8000:80 --name web my/image
docker run --rm --name hello my/image \
hello.sh
In normal operation you should not need docker exec, though it's really useful for debugging. If you are in a situation where you're really stuck, you need more diagnostic tools to be understand how to reproduce a situation, and you don't have a choice but to look inside the running container, you can also docker cp the script or tool into the container before you docker exec there. If you do this, remember that the image also needs to contain any dependencies for the tool (interpreters like Python or GNU Bash, C shared libraries), and that any docker cpd files will be lost when the container exits.
You can use a bind-mount to mount a local file to the container and execute it. When you do that, however, be aware that you'll need to be providing the container process with write/execute access to the folder or specific script you want to run. Depending on your objective, using Docker for this purpose may not be the best idea.
See #David Maze's answer for reasons why. However, here's how you can do it:
Assuming you're on a Unix based system and the hello.sh script is in your current directory, you can mount that single script to the container with -v $(pwd)/hello.sh:/home/hello.sh.
This command will mount the file to your container, start your shell in the folder where you mounted it, and run a shell:
docker run -it -v $(pwd)/hello.sh:/home/hello.sh --workdir /home ubuntu:20.04 /bin/sh
root#987eb876b:/home ./hello.sh
Hello World!
This command will run that script directly and save the output into the variable output:
output=$(docker run -it -v $(pwd)/hello.sh:/home/test.sh ubuntu:20.04 /home/hello.sh)
echo $output
Hello World!
References for more information:
https://docs.docker.com/storage/bind-mounts/#start-a-container-with-a-bind-mount
https://docs.docker.com/storage/bind-mounts/#use-a-read-only-bind-mount

Docker run -v mounting a file as a directory

I'm trying to mount a directory containing a file some credentials onto a container with the -v flag, but instead of mounting that file as a file, it mounts it as a directory:
Run script:
$ mkdir creds/
$ cp key.json creds/key.json
$ ls -l creds/
total 4
-rw-r--r-- 1 root root 2340 Oct 12 22:59 key.json
$ docker run -v /*pathToWorkingDirectory*/creds:/creds *myContainer* *myScript*
When I look at the debug spew of the docker run command, I see that it creates the /creds/ directory, but for some reason creates key.json as a subdirectory under that, rather than copying the file.
I've seen some other posts saying that if you tell docker run to mount a file it can't find, it will create a directory on the container with the filename, but since I didn't specify the filename and it knew to name the new directory 'key.json' it seems like it was able to find the file, but created it as a directory anyway? Has anyone run into this before?
In case it's relevant, the script is being run in Docker-in-Docker in another container as part of GitLab's CI process.
You are running Docker-in-Docker, this means when you specify a -v volume, Docker will look for this directory on the host since the shared sock enabling Docker-in-Docker actualy means your run command starts a container alongside the runner container.
I explain this in more detail in this SO answer:
https://stackoverflow.com/a/46441426/2078207
Also notice the comment below this answer to get a direction for a solution.

Execute host shell script from meteor container

I have shell script on my host. I've installed docker container with meteord image. I have it running, however I would like to execute this shell script inside meteord docker image. Is that possible?
Yes. That is possible but you will have to copy the script in the container as follow:
docker cp <script> <container-name/id>:<path>
docker exec <container-name/id> <path>/<script>
For example:
docker cp script.sh silly_nightingale:/root
docker exec silly_nightingale /root/script.sh
Just make sure the script has executable permissions. Also, you can copy the script at build time in Dockerfile and run it using exec afterwards.
Updated:
You can also try docker volume for it as follow:
docker run -d -v /absolute/path/to/script/dir:/path/in/container <IMAGE>
Now run the script as follow:
docker exec -it <Container-name> bash /path/in/container/script.sh
Afterwards you will be able to see the generated files in /absolute/path/to/script/dir on host. Also, make sure to use absolute paths in scripts and commands to avoid redirection issues. I hope it helps.

Piping a file into docker run

I need to pipe (inject) a file or some data into docker as part of the run command and have it written to a file within the container as part of the startup. Is there best practise way to do this ?
I've tried this.
cat data.txt | docker run -a stdin -a stdout -i -t ubuntu /bin/bash -c 'cat >/data.txt'
But can't seem to get it to work.
cat setup.json | docker run -i ubuntu /bin/bash -c 'cat'
This worked for me. Remove the -t. Don't need the -a's either.
The better solution is to make (mount) you host folder be accessible to docker container. E.g. like this
docker run -v /Users/<path>:/<container path> ...
Here is /Users/<path> is a folder on your host computer and <container path> mounted path inside container.
Also see Manage data in containers manual page.
UPDATE another Accessing External Files from Docker Containers example.

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