chown docker volumes on host (possibly through docker-compose) - docker

I have the following example
version: '2'
services:
proxy:
container_name: proxy
hostname: proxy
image: nginx
ports:
- 80:80
- 443:443
volumes:
- proxy_conf:/etc/nginx
- proxy_htdocs:/usr/share/nginx/html
volumes:
proxy_conf: {}
proxy_htdocs: {}
which works fine. When I run docker-compose up it creates those named volumes in /var/lib/docker/volumes and all is good. However, from the host, I can only access /var/lib/docker as root, because it's root:root (makes sense). I was wondering if there is a way of chowning the host's directories to something more sensible/safe (like, my relatively unprivileged user that I use to do most things on the host) or if I just have to suck it up and chown them manually. I'm starting to have a number of scripts already to work around other issues, so having an extra couple of lines won't be much of a problem, but I'd really like to keep my self-written automation minimal, if I can -- fewer chances for stupid mistakes.
By the way, no: if I mount host directories instead of creating volumes, they get overlaid, meaning that if they start empty, they stay empty, and I don't get the default configuration (or whatever) from inside the container.
Extra points: can I just move the volumes to a more convenient location? Say, /home/myuser/myserverstuff/volumes?

It's best to not try to access files inside /var/lib/docker directly. Those directories are meant to be managed by the docker daemon, and not to be messed with.
To access the data inside a volume, there's a number of options;
use a bind-mounted directory (you considered that, but didn't fit your use case).
use a "service" container that uses the same volume and makes it accessible through that container, for example a container running ssh (to use scp) or a SAMBA container (such as svendowideit/samba)
use a volume-driver plugin. there's various plugins around that offer all kind of options. For example, the local persist plugin is a really simple plug-in that allows you to specify where docker should store the volume data (so outside of /var/lib/docker)

Related

Docker container with Mariadb - Can the container get bricked and lose data

I thought I can use Bound volumes as suggested for my another post
Docker-compose mariadb external volume mapping issue
But I read that containers should be stateless. So it seems my thinking is wrong?
I do not know what catastrophic failures can occur, so is there a possibility that I may lose all data, if the container is bricked? or is there a way to use external storage and recover?
How to manage this situation? I have a schema table which manages migrations, so don't want that table to be new and start from square 1
Question: Should I let the mariadb container on cloud write to wherever it likes? or write to host folder?
My docker -compose snippet
mariadb:
image: mariadb:10.4
...
environment:
..
logging:
...
networks:
- backend
restart: on-failure
volumes:
- maria_volume:/var/lib/mysql
command: --character-set-server=utf8mb4 --collation-server=utf8mb4_general_ci
# Volumes
volumes:
maria_volume:
Another version is (./mariadb instead of maria_volume in volumes section)
networks:
- backend
restart: on-failure
volumes:
- ./mariadb:/var/lib/mysql
command: --character-set-server=utf8mb4 --collation-server=utf8mb4_general_ci
Your application at large needs to keep data somewhere. Having a relational-database container with storage mounted is fine. In a production environment you could choose to run a non-container database or use a cloud-hosted database if that met your needs better.
I feel like the actual storage mechanisms are pretty robust, both for named volumes and bind-mounted host directories. You probably will not have data-corruption problems in either case. As always, make sure you have backups of your data if it's at all important.
There's not a clear choice between using named volumes and host directories here. Host directories are probably easier to back up and restore; on some platforms named volumes will be faster. In both cases, in normal operation, the data will survive destroying and recreating the container. It'll be a little easier to destroy a named volume's state using docker commands, which depending on your specific use case could point in either direction.
It has occasionally happened to me that Docker's internal state gets corrupted, and when this happens the easiest workaround is to delete the entire /var/lib/docker tree and start over (there is an equivalent "reset" button in the Docker Desktop application). This path would lose named volumes too. On native Linux it's been widely observed that the actual named-volume storage is just a directory, so you might be able to preserve this.

Specify origin of data for a shared volume

I have a task that I already solved, but where I'm not satisfied with the solution. Basically, I have a webserver container (Nginx) and a fast-CGI container (PHP-FPM). The webserver container is built on an off-the-shelf image, the FCGI container is based on a custom image and contains the application files. Now, since not everything is sourcecode and processed on the FCGI container, I need to make the application files available inside the webserver container as well.
Here's the docker-compose.yml that does the job:
version: '3.3'
services:
nginx:
image: nginx:1-alpine
volumes:
- # customize just the Nginx configuration file
type: bind
source: ./nginx.conf
target: /etc/nginx/nginx.conf
- # mount application files from PHP-FPM container
type: volume
source: www-data
target: /var/www/my-service
read_only: true
volume:
nocopy: true
ports:
- "80:80"
depends_on:
- php-fpm
php-fpm:
image: my-service:latest
command: ["/usr/sbin/php-fpm7.3", "--nodaemonize", "--force-stderr"]
volumes:
- # create volume from application files
# This one populates the content of the volume.
type: volume
source: www-data
target: /var/www/my-service
volumes:
# volume with application files shared between nginx and php-fpm
www-data:
What I don't like here is mostly reflected by the comments concerning the volumes. Who creates and stores data should be obvious from the code and not from comments. Also, what I really dislike is that docker actually creates a place where it stores data for this volume. Not only does this use up disk space and increase startup time, it also requires me to never forget to use docker-compose down --volumes in order to refresh the content on next start. Imagine my anger when I found out that down didn't tear down what up created and that I was hunting ghosts from previous runs.
My questions concerning this:
Can I express in code that one container contains data that should be made available to other containers more clearly? The above code works, but it fails utterly to express the intent.
Can I avoid anything persistent being created to avoid above mentioned downsides?
I would have liked to investigate into things like tmpfs volumes or other volume options. My problem is that I can't find documentation for available volume drivers or even explore which volume drivers exist. Maybe I have missed some CLI for that, I'd really appreciate a nudge in the right direction here.
You can use the local driver with option type=tmpfs, for example:
volumes:
www-data:
driver: local
driver_opts:
type: tmpfs
device: tmpfs
Which will follow your requirements:
Data will be shared between containers at runtime
Data should not be persisted, i.e. volumes will be emptied when container are stopped, restarted or destroyed
This is CLI equivalent of
docker volume create --driver local --opt type=tmpfs --opt device=tmpfs www-data
Important note: this is NOT a Docker tmpfs mount, but a Docker volume using a tmpfs option. As stated in the local volume driver documentation it uses the Linux mount options, in our case --types to specify a tmpfs filesystem. Contrary to a simple tmpfs mount, it will allow you to share the volume between container while retaining classic behavior of a temporary filesystem
I can't find documentation for available volume drivers or even explore which volume drivers exist
Volume doc, including tmpfs, Bind mount and Volumes
local driver options are found in the docker volume create doc
Volume driver plugins - some are still updated regularly or seem maintained, but most of them have not been updated for a long time or are deprecated. The list does not seem exhaustive though, for instance vieux/sshfs is not mentioned.
Can I express in code that one container contains data that should be made available to other containers more clearly? The above code works, but it fails utterly to express the intent.
I don't think so, your code is are already quite clear as to the intent of this volume:
That's what volume are for: sharing data between containers. As stated in the doc Volumes can be more safely shared among multiple container, furthermore only containers are supposed to write into volumes.
nocopy and read_only clearly express that nginx relies on data written by another container as it will only be able to read from this volume
Given your volume is not external, it is safe to assume only another container from the same stack can use it
A bit of logic and experience with Docker allow to quickly come to the previous point, but even for less experienced Docker users your comments gives clear indications, and your comments are part of the code ;)
You also can make custom nginx image with copy of static from your php image
here is Dockerfile for nginx
FROM my-service:latest AS src-files
FROM nginx
COPY --from=src-files /path-to-static-in-my-service-image /path-to-static-in-nginx
This will allow you to use no volumes with source code
Also can use TAG from env variables in Dockerfile
FROM my-service:${TAG} AS src-files
...
It depends of the usecase of your setup. If it's only for local dev or if you want the same thing on production. On dev, having a volume populated manually or by one container for others could be OK.
But if you want something that will run the same way in production, you may need something else. For exemple, in production, I don't want to have my code in a volume but in my image in an immutable way and I just need to redeploy it.
For me a volume is not for storing application code but for storing data like cache, user uploaded content, etc. Something we want to keep between deployments.
So, if we want to have 2 images with the same files not in a volume, I will build 2 images with the application code and static content, one for php, one for nginx.
But the deployment is usually not synchrone for the 2 images. We solve this issue by deploying the PHP application first and the nginx application after. On nginx, we add a config that try to serve static content from it first and if the file doesn't exist, to ask it to PHP.
For the dev environment, we will reuse the same image but use a volume to mount the current code inside the container (an host bind mount).
But in some case, the bind mount could have some issues:
- On Mac the file sharing is slow but it should be better with the latest version of Docker Desktop in the Edge channel (2.3.1.0)
- On Windows, the file sharing is slow too
- On Linux, we need to be careful about the file permission and the user used inside the container
If you try to solve one/many of this issues with the volume solution, we could find some solution for that. Ex, on Mac, I will try to Edge release of docker first, on Windows, if possible, I will use WSL2 and Docker set to use the WSL2 backend.

What's the difference between declaring in docker-compose.yml volume as section and under a service?

What's the difference between declaring in the docker-compose.yml file a volume section and just using the volumes keyword under a service?
For example, I map a volume this way for a container:
services:
mysqldb:
volumes:
- ./data:/var/lib/mysql
This will map to the folder called data from my working directory.
But I could also map a volume by declaring a volume section and use its alias for the container:
services:
mysqldb:
volumes:
- data_volume:/var/lib/mysql
volumes:
data_volume:
driver: local
In this method, the actual location of where the mapped files are stored appears to be somewhat managed by docker compose.
What are the differences between these 2 methods or are they the same? Which one should I really use?
Are there any benefits of using one method over the other?
The difference between the methods you've described is that first method is a bind mount, and the other is a volume. These are more of Docker functions (rather than Docker Compose), and there are several benefits volumes provide over mounting a path from your host's filesystem. As described in the documentation, they:
are easier to back up or migrate
can be managed with docker volumes or the API (as opposed to the raw filesystem)
work on both Linux and Windows containers
can be safely shared among multiple containers
can have content pre-populated by a container (with bind mounts sometimes you have to copy data out, then restart the container)
Another massive benefit to using volumes are the volume drivers, which you'd specify in place of local. They allow you to store volumes remotely (i.e. cloud, etc) or add other features like encryption. This is core to the concept of containers, because if the running container is stateless and uses remote volumes, then you can move the container across hosts and it can be run without being reconfigured.
Therefore, the recommendation is to use Docker volumes. Another good example is the following:
services:
webserver_a:
volumes:
- ./serving/prod:/var/www
webserver_b:
volumes:
- ./serving/prod:/var/www
cache_server:
volumes:
- ./serving/prod:/cache_root
If you move the ./serving directory somewhere else, the bind mount breaks because it's a relative path. As you noted, volumes have aliases and have their path managed by Docker, so:
you wouldn't need to find and replace the path 3 times
the volume using local stores data somewhere else on your system and would continue mounting just fine
TL;DR: try and use volumes. They're portable, and encourage practices that reduce dependencies on your host machine.

Docker Anonymous Volumes

I've seen Docker volume definitions in docker-compose.yml files like so:
-v /path/on/host/modules:/var/www/html/modules
I noticed that Drupal's official image, their docker-compose.yml file is using anonymous volumes.
Notice the comments:
volumes:
- /var/www/html/modules
- /var/www/html/profiles
- /var/www/html/themes
# this takes advantage of the feature in Docker that a new anonymous
# volume (which is what we're creating here) will be initialized with the
# existing content of the image at the same location
- /var/www/html/sites
Is there a way to associate an anonymous volume with a path on the host machine after the container is running? If not, what is the point of having anonymous volumes?
Full docker-compose.yml example:
version: '3.1'
services:
drupal:
image: drupal:8.2-apache
ports:
- 8080:80
volumes:
- /var/www/html/modules
- /var/www/html/profiles
- /var/www/html/themes
# this takes advantage of the feature in Docker that a new anonymous
# volume (which is what we're creating here) will be initialized with the
# existing content of the image at the same location
- /var/www/html/sites
restart: always
postgres:
image: postgres:9.6
environment:
POSTGRES_PASSWORD: example
restart: always
Adding a bit more info in response to a follow-up question/comment from #JeffRSon asking how anonymous volumes add flexibility, and also to answer this question from the OP:
Is there a way to associate an anonymous volume with a path on the host machine after the container is running? If not, what is the point of having anonymous volumes?
TL;DR: You can associate a specific anonymous volume with a running container via a 'data container', but that provides flexibility to cover a use case that is now much better served by the use of named volumes.
Anonymous volumes were helpful before the addition of volume management in Docker 1.9. Prior to that, you didn't have the option of naming a volume. With the 1.9 release, volumes became discrete, manageable objects with their own lifecycle.
Before 1.9, without the ability to name a volume, you had to reference it by first creating a data container
docker create -v /data --name datacontainer mysql
and then mounting the data container's anonymous volume into the container that needed access to the volume
docker run -d --volumes-from datacontainer --name dbinstance mysql
These days, it's better to use named volumes since they are much easier to manage and much more explicit.
Anonymous volumes are equivalent to having these directories defined as VOLUME's in the image's Dockerfile. In fact, directories defined as VOLUME's in a Dockerfile are anonymous volumes if they are not explicitly mapped to the host.
The point of having them is added flexibility.
PD:
Anonymous volumes already reside in the host somewhere in /var/lib/docker (or whatever directory you configured). To see where they are:
docker inspect --type container -f '{{range $i, $v := .Mounts }}{{printf "%v\n" $v}}{{end}}' $CONTAINER
Note: Substitute $CONTAINER with the container's name.
One possible usecase of anonymous volumes in these days is in combination with Bind Mounts. When you want to bind some folder but without any specific subfolders. These specific subfolders should be then set as named or anonymous volumes. It will guarantee that these subfolders will be present in your container folder which is bounded outside the container but you do not have to have it in your bound folder on the host machine at all.
For example you can have your frontend NodeJS project built in container where is needed node_modules folder for it but you dont need this folder for your coding at all. You can then map your project folder to some folder outside the container and set the node_modules folder as an anonymous volume. Node_modules folder will be present in the container all the time even if you do not have it on the host machine in your working folder.
Not sure why Drupal developers suggest such settings. Anyways, I can think of two differences:
With named volumes you have a name that suggests to which project it belongs.
After docker-compose down && docker-compose up -d a new empty anonymous volume gets attached to the container. (But the old one doesn't disappear. docker doesn't delete volumes unless you tell it to.) With named volumes you'll get the volume that was attached to the container before docker-compose down.
As such, you probably don't want to put data you don't want to lose into an anonymous volume (like db or something). Again, they won't disappear by themselves. But after docker-compose down && docker-compose up -d && docker volume prune a named volume will survive.
For something less critical (like node_modules) I don't have strong argument for or against named volumes.
Is there a way to associate an anonymous volume with a path on the host machine after the container is running?
For that you need to change the settings, e.g. /var/www/html/modules -> ./modules:/var/www/html/modules, and do docker-compose up -d. But that will turn an anonymous volume into a bind mount. And you will need to copy the data from the volume to ./modules. Similarly, you can turn an anonymous volume into a named volume.

How to use docker image, without mounting the default volumes?

I want to use Docker MySQL.
docker run mysql
But I don't want to save data on the host machine. I want all the information to be protected inside the container. By default, this image created an unnamed volume, and attach it to the container.
Is it possible, to use the same container, (I don't want to create a new MySQL image from ground), but disable the volume?
In other words: Many Docker images in docker hub are using volumes by default. What is the easiest way to save all the data inside the container (so push, and commit will contain the data)? There is a command to stop a container, change it's Mounts settings, and start again?
I know that it is not best practice, my question is if it is possible.
EDIT: There is a tool mentioned in the comments of the below thread that can edit docker image metadata, allowing you to remove a volume.
This is currently an open issue awaiting someone with the bandwidth to code it. You can track the progress here, with this link going directly to the applicable comment:
#veqryn since reopening this issue, nobody started working on a pull-request; the existing pull request did no longer apply cleanly on the code-base so a new one has to be opened; if anyone is interested in working on this, then things can get going again.
I too would like this feature! Mounting /var/lib/mysql/ on windows hosts with NTFS gives the volume root:root permissions which can't be chown'd; I don't want to add mysql user to the root group. I would like to UNVOLUME the /var/lib/mysql directory and replace it with a symlink that does have mysql:mysql permissions, pointed at /host/ntfs/mnt which is root:root 🤷‍♀️
As shown in this question, you can create, name and associate a container volume easily enough to the default unnamed one of mysql
version: '2'
services:
db:
image: mysql
volumes:
- dbdata:/var/lib/mysql
volumes:
dbdata:
driver: local
See "Mount a shared-storage volume as a data volume": you can uise other drivers, like flocker, and benefit from a multi-host portable volume.

Resources