Why is sonarqube call from jenkins failing with HTTP 500? - jenkins

I have a build job running in jenkins analyzing a java code web project. The compilation and build part is working fine. The jobs fails when sonarqube is called.
I get the following error message in jenkins:
[ERROR] Failed to execute goal org.sonarsource.scanner.maven:sonar-maven-plugin:3.0.1:sonar (default-cli) on project PROJECT: Unable to load component class org.sonar.api.config.Settings: Unable to load component class org.sonar.batch.repository.ProjectRepositories: Error 500 on http://example.com/sonar/batch/project.protobuf?key=PROJECT -> [Help 1]
org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal org.sonarsource.scanner.maven:sonar-maven-plugin:3.0.1:sonar (default-cli) on project PROJECT: Unable to load component class org.sonar.api.config.Settings
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:217)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59)
at org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:320)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156)
at org.apache.maven.cli.MavenCli.execute(MavenCli.java:537)
at org.apache.maven.cli.MavenCli.doMain(MavenCli.java:196)
at org.apache.maven.cli.MavenCli.main(MavenCli.java:141)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:290)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:230)
at org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode(Launcher.java:409)
at org.codehaus.plexus.classworlds.launcher.Launcher.main(Launcher.java:352)
Caused by: org.apache.maven.plugin.MojoExecutionException: Unable to load component class org.sonar.api.config.Settings
at org.sonarsource.scanner.maven.bootstrap.ExceptionHandling.handle(ExceptionHandling.java:36)
at org.sonarsource.scanner.maven.bootstrap.RunnerBootstrapper.execute(RunnerBootstrapper.java:81)
at org.sonarsource.scanner.maven.SonarQubeMojo.execute(SonarQubeMojo.java:112)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:101)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:209)
... 19 more
Caused by: java.lang.IllegalStateException: Unable to load component class org.sonar.api.config.Settings
at org.sonar.core.platform.ComponentContainer$ExtendedDefaultPicoContainer.getComponent(ComponentContainer.java:62)
at org.picocontainer.DefaultPicoContainer.getComponent(DefaultPicoContainer.java:678)
at org.sonar.core.platform.ComponentContainer.getComponentByType(ComponentContainer.java:262)
at org.sonar.batch.scan.ProjectScanContainer.doBeforeStart(ProjectScanContainer.java:111)
at org.sonar.core.platform.ComponentContainer.startComponents(ComponentContainer.java:130)
at org.sonar.core.platform.ComponentContainer.execute(ComponentContainer.java:117)
at org.sonar.batch.task.ScanTask.execute(ScanTask.java:55)
at org.sonar.batch.task.TaskContainer.doAfterStart(TaskContainer.java:86)
at org.sonar.core.platform.ComponentContainer.startComponents(ComponentContainer.java:132)
at org.sonar.core.platform.ComponentContainer.execute(ComponentContainer.java:117)
at org.sonar.batch.bootstrap.GlobalContainer.executeTask(GlobalContainer.java:122)
at org.sonar.batch.bootstrapper.Batch.executeTask(Batch.java:119)
at org.sonar.runner.batch.BatchIsolatedLauncher.execute(BatchIsolatedLauncher.java:67)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at org.sonar.runner.impl.IsolatedLauncherProxy.invoke(IsolatedLauncherProxy.java:61)
at com.sun.proxy.$Proxy16.execute(Unknown Source)
at org.sonar.runner.api.EmbeddedRunner.doExecute(EmbeddedRunner.java:274)
at org.sonar.runner.api.EmbeddedRunner.runAnalysis(EmbeddedRunner.java:165)
at org.sonar.runner.api.EmbeddedRunner.runAnalysis(EmbeddedRunner.java:152)
at org.sonarsource.scanner.maven.bootstrap.RunnerBootstrapper.execute(RunnerBootstrapper.java:78)
... 22 more
Caused by: java.lang.IllegalStateException: Unable to load component class org.sonar.batch.repository.ProjectRepositories
at org.sonar.core.platform.ComponentContainer$ExtendedDefaultPicoContainer.getComponent(ComponentContainer.java:62)
at org.picocontainer.DefaultPicoContainer.getComponent(DefaultPicoContainer.java:632)
at org.picocontainer.parameters.BasicComponentParameter$1.resolveInstance(BasicComponentParameter.java:118)
at org.picocontainer.parameters.ComponentParameter$1.resolveInstance(ComponentParameter.java:136)
at org.picocontainer.injectors.SingleMemberInjector.getParameter(SingleMemberInjector.java:78)
at org.picocontainer.injectors.ConstructorInjector$CtorAndAdapters.getParameterArguments(ConstructorInjector.java:309)
at org.picocontainer.injectors.ConstructorInjector$1.run(ConstructorInjector.java:335)
at org.picocontainer.injectors.AbstractInjector$ThreadLocalCyclicDependencyGuard.observe(AbstractInjector.java:270)
at org.picocontainer.injectors.ConstructorInjector.getComponentInstance(ConstructorInjector.java:364)
at org.picocontainer.injectors.AbstractInjectionFactory$LifecycleAdapter.getComponentInstance(AbstractInjectionFactory.java:56)
at org.picocontainer.behaviors.AbstractBehavior.getComponentInstance(AbstractBehavior.java:64)
at org.picocontainer.behaviors.Stored.getComponentInstance(Stored.java:91)
at org.picocontainer.DefaultPicoContainer.getInstance(DefaultPicoContainer.java:699)
at org.picocontainer.DefaultPicoContainer.getComponent(DefaultPicoContainer.java:647)
at org.sonar.core.platform.ComponentContainer$ExtendedDefaultPicoContainer.getComponent(ComponentContainer.java:60)
... 44 more
Caused by: org.sonarqube.ws.client.HttpException: Error 500 on http://example.com/sonar/batch/project.protobuf?key=PROJECT
at org.sonarqube.ws.client.BaseResponse.failIfNotSuccessful(BaseResponse.java:32)
at org.sonar.batch.bootstrap.BatchWsClient.failIfUnauthorized(BatchWsClient.java:96)
at org.sonar.batch.bootstrap.BatchWsClient.call(BatchWsClient.java:67)
at org.sonar.batch.cache.WSLoader$3.load(WSLoader.java:85)
at org.sonar.batch.cache.WSLoader$3.load(WSLoader.java:81)
at org.sonar.batch.cache.WSLoader.loadFromServer(WSLoader.java:225)
at org.sonar.batch.cache.WSLoader.loadFromServerFirst(WSLoader.java:188)
at org.sonar.batch.cache.WSLoader.load(WSLoader.java:148)
at org.sonar.batch.cache.WSLoader.loadStream(WSLoader.java:124)
at org.sonar.batch.repository.DefaultProjectRepositoriesLoader.load(DefaultProjectRepositoriesLoader.java:60)
at org.sonar.batch.repository.ProjectRepositoriesProvider.provide(ProjectRepositoriesProvider.java:45)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at org.picocontainer.injectors.MethodInjector.invokeMethod(MethodInjector.java:129)
at org.picocontainer.injectors.MethodInjector.access$000(MethodInjector.java:39)
at org.picocontainer.injectors.MethodInjector$2.run(MethodInjector.java:113)
at org.picocontainer.injectors.AbstractInjector$ThreadLocalCyclicDependencyGuard.observe(AbstractInjector.java:270)
at org.picocontainer.injectors.MethodInjector.decorateComponentInstance(MethodInjector.java:120)
at org.picocontainer.injectors.CompositeInjector.decorateComponentInstance(CompositeInjector.java:58)
at org.picocontainer.injectors.Reinjector.reinject(Reinjector.java:142)
at org.picocontainer.injectors.ProviderAdapter.getComponentInstance(ProviderAdapter.java:96)
at org.picocontainer.DefaultPicoContainer.getInstance(DefaultPicoContainer.java:699)
at org.picocontainer.DefaultPicoContainer.getComponent(DefaultPicoContainer.java:647)
at org.sonar.core.platform.ComponentContainer$ExtendedDefaultPicoContainer.getComponent(ComponentContainer.java:60)
... 58 more
The error message in the sonarQube log on level TRACE|DEBUG|INFO is the following:
2016.02.09 10:59:04 ERROR web[o.s.s.w.WebServiceEngine] Fail to process request http://example.com/sonar/batch/project.protobuf?key=PROJECT
java.lang.NullPointerException: null
I am using jenkins 1.646 with oracle java 1.8.0_72-b15 running on debian 7.9 (wheezy). SonarQube is version 5.3 with PostgreSQL 9.1.18. It uses the same java vm as they run on the same machine.
There a jobs in this jenkins instance that do not fail and are able to submit there data to sonarqube, hence t he workflow is okay.
I couldn't find anything useful to solve this problem via google and therefore need your help.
Do you need any additional information?
Updates
#1 23.02.2016 - 10:16 CET
List of plugins:
$ ls -1 /opt/sonar/extensions/plugins/
README.txt
sonar-checkstyle-plugin-2.4.jar
sonar-cobertura-plugin-1.6.3.jar
sonar-findbugs-plugin-3.3.jar
sonar-java-plugin-3.9.jar
sonar-l10n-de-plugin-1.2.jar
sonar-php-plugin-2.7.jar
sonar-pmd-plugin-2.5.jar
sonar-scm-git-plugin-1.1.jar
sonar-scm-svn-plugin-1.2.jar
#2 02.03.2016 - 11:49 CET
Today, SonarQube logged a exception:
2016.03.02 10:45:40 ERROR web[o.s.s.w.WebServiceEngine] Fail to process request http://example.com/sonar/batch/project.protobuf?key=PROJECT
java.lang.NullPointerException: null
at com.google.protobuf.Utf8.encodedLength(Utf8.java:378) ~[protobuf-java-3.0.0-beta-1.jar:na]
at com.google.protobuf.CodedOutputStream.computeStringSizeNoTag(CodedOutputStream.java:911) ~[protobuf-java-3.0.0-beta-1.jar:na]
at com.google.protobuf.FieldSet.computeElementSizeNoTag(FieldSet.java:834) ~[protobuf-java-3.0.0-beta-1.jar:na]
at com.google.protobuf.MapEntryLite.getFieldSize(MapEntryLite.java:143) ~[protobuf-java-3.0.0-beta-1.jar:na]
at com.google.protobuf.MapEntryLite.getSerializedSize(MapEntryLite.java:135) ~[protobuf-java-3.0.0-beta-1.jar:na]
at com.google.protobuf.MapEntry.getSerializedSize(MapEntry.java:120) ~[protobuf-java-3.0.0-beta-1.jar:na]
at com.google.protobuf.CodedOutputStream.computeMessageSizeNoTag(CodedOutputStream.java:947) ~[protobuf-java-3.0.0-beta-1.jar:na]
at com.google.protobuf.CodedOutputStream.computeMessageSize(CodedOutputStream.java:707) ~[protobuf-java-3.0.0-beta-1.jar:na]
at org.sonarqube.ws.WsBatch$WsProjectResponse.getSerializedSize(WsBatch.java:1878) ~[sonar-ws-5.3.jar:na]
at com.google.protobuf.AbstractMessageLite.writeTo(AbstractMessageLite.java:77) ~[protobuf-java-3.0.0-beta-1.jar:na]
at org.sonar.server.ws.WsUtils.writeProtobuf(WsUtils.java:49) ~[sonar-server-5.3.jar:na]
at org.sonar.server.batch.ProjectAction.handle(ProjectAction.java:83) ~[sonar-server-5.3.jar:na]
at org.sonar.server.ws.WebServiceEngine.execute(WebServiceEngine.java:85) ~[sonar-server-5.3.jar:na]
at sun.reflect.GeneratedMethodAccessor159.invoke(Unknown Source) ~[na:na]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_74]
at java.lang.reflect.Method.invoke(Method.java:498) ~[na:1.8.0_74]
at org.jruby.javasupport.JavaMethod.invokeDirectWithExceptionHandling(JavaMethod.java:425) [jruby-complete-1.7.9.jar:na]
at org.jruby.javasupport.JavaMethod.invokeDirect(JavaMethod.java:292) [jruby-complete-1.7.9.jar:na]
at org.jruby.java.invokers.InstanceMethodInvoker.call(InstanceMethodInvoker.java:44) [jruby-complete-1.7.9.jar:na]
at org.jruby.runtime.callsite.CachingCallSite.call(CachingCallSite.java:70) [jruby-complete-1.7.9.jar:na]
at org.jruby.ast.CallManyArgsNode.interpret(CallManyArgsNode.java:59) [jruby-complete-1.7.9.jar:na]
at org.jruby.ast.NewlineNode.interpret(NewlineNode.java:105) [jruby-complete-1.7.9.jar:na]
at org.jruby.ast.BlockNode.interpret(BlockNode.java:71) [jruby-complete-1.7.9.jar:na]
at org.jruby.evaluator.ASTInterpreter.INTERPRET_METHOD(ASTInterpreter.java:74) [jruby-complete-1.7.9.jar:na]
at org.jruby.internal.runtime.methods.InterpretedMethod.call(InterpretedMethod.java:161) [jruby-complete-1.7.9.jar:na]
at org.jruby.internal.runtime.methods.DefaultMethod.call(DefaultMethod.java:190) [jruby-complete-1.7.9.jar:na]
at org.jruby.RubyClass.finvoke(RubyClass.java:527) [jruby-complete-1.7.9.jar:na]
at org.jruby.RubyBasicObject.send(RubyBasicObject.java:2590) [jruby-complete-1.7.9.jar:na]
at org.jruby.RubyKernel.send(RubyKernel.java:2223) [jruby-complete-1.7.9.jar:na]
at org.jruby.RubyKernel$INVOKER$s$send.call(RubyKernel$INVOKER$s$send.gen) [jruby-complete-1.7.9.jar:na]
at org.jruby.internal.runtime.methods.JavaMethod$JavaMethodOneOrNBlock.call(JavaMethod.java:350) [jruby-complete-1.7.9.jar:na]
at org.jruby.runtime.callsite.CachingCallSite.cacheAndCall(CachingCallSite.java:326) [jruby-complete-1.7.9.jar:na]
at org.jruby.runtime.callsite.CachingCallSite.call(CachingCallSite.java:170) [jruby-complete-1.7.9.jar:na]
at rubyjit.ActionController::Base$$perform_action_DA0FC0A901DD1257EC969DB0C482DD8514B8F04B2117389415.__file__(/opt/sonar/web/WEB-INF/
gems/gems/actionpack-2.3.15/lib/action_controller/base.rb:1333) [jruby-complete-1.7.9.jar:na]
at rubyjit.ActionController::Base$$perform_action_DA0FC0A901DD1257EC969DB0C482DD8514B8F04B2117389415.__file__(/opt/sonar/web/WEB-INF/
gems/gems/actionpack-2.3.15/lib/action_controller/base.rb) [jruby-complete-1.7.9.jar:na]
at org.jruby.internal.runtime.methods.JittedMethod.call(JittedMethod.java:141) [jruby-complete-1.7.9.jar:na]
at org.jruby.internal.runtime.methods.DefaultMethod.call(DefaultMethod.java:185) [jruby-complete-1.7.9.jar:na]
at org.jruby.internal.runtime.methods.AliasMethod.call(AliasMethod.java:56) [jruby-complete-1.7.9.jar:na]
at org.jruby.runtime.callsite.CachingCallSite.cacheAndCall(CachingCallSite.java:306) [jruby-complete-1.7.9.jar:na]
at org.jruby.runtime.callsite.CachingCallSite.call(CachingCallSite.java:136) [jruby-complete-1.7.9.jar:na]
at rubyjit.ActionController::Filters::InstanceMethods$$call_filters_A7E1D3FFBF56E3CB7C0EBA850688505249A05AE92117389415.__file__(/opt/sonar/web/WEB-INF/gems/gems/actionpack-2.3.15/lib/action_controller/filters.rb:617) [jruby-complete-1.7.9.jar:na]
at rubyjit.ActionController::Filters::InstanceMethods$$call_filters_A7E1D3FFBF56E3CB7C0EBA850688505249A05AE92117389415.__file__(/opt/sonar/web/WEB-INF/gems/gems/actionpack-2.3.15/lib/action_controller/filters.rb) [jruby-complete-1.7.9.jar:na]
at org.jruby.internal.runtime.methods.JittedMethod.call(JittedMethod.java:261) [jruby-complete-1.7.9.jar:na]
at org.jruby.runtime.callsite.CachingCallSite.call(CachingCallSite.java:236) [jruby-complete-1.7.9.jar:na]
at rubyjit.ActionController::Filters::InstanceMethods$$perform_action_with_filters_4C7C67B4A5564FF5DC76344AF2372660F608839C2117389415.__file__(/opt/sonar/web/WEB-INF/gems/gems/actionpack-2.3.15/lib/action_controller/filters.rb:610) [jruby-complete-1.7.9.jar:na]
at rubyjit.ActionController::Filters::InstanceMethods$$perform_action_with_filters_4C7C67B4A5564FF5DC76344AF2372660F608839C2117389415.__file__(/opt/sonar/web/WEB-INF/gems/gems/actionpack-2.3.15/lib/action_controller/filters.rb) [jruby-complete-1.7.9.jar:na]
at org.jruby.internal.runtime.methods.JittedMethod.call(JittedMethod.java:141) [jruby-complete-1.7.9.jar:na]
[...]
Here I cutted the stacktrace. If you need more details, please ask.


You face https://jira.sonarsource.com/browse/SONAR-7084. Analysis fails if the previous analysis was done with a version of SonarQube less than 4.2. Apparently the problem is not fully resolved according to the latest comment on the JIRA ticket.

Related

SonarQube Scanner execution fails in Jenkins with java.lang.IllegalStateException Error

Sonarqube Build Environment details as follows:
SonarQube Server Version - 5.6.6 (64-Bit).
Sonar-scanner Version - 3.0.3.778 (running through “Execute SonarQube Scanner” in Jenkins)
sonar-java-plugin-4.14.0.11784.jar
sonar-findbugs-plugin-3.6.0.jar
Build Mode: Jenkins - (Version-2.46.2-LTS)
Build: Maven
Problem Description:
The sonar-project.properties declared in Jenkins itself. While analyzing it fails with below errors.
ERROR: Error during SonarQube Scanner execution
java.lang.IllegalStateException: Unable to load component class org.sonar.api.config.Settings
at org.sonar.core.platform.ComponentContainer$ExtendedDefaultPicoContainer.getComponent(ComponentContainer.java:69)
at org.picocontainer.DefaultPicoContainer.getComponent(DefaultPicoContainer.java:678)
at org.sonar.core.platform.ComponentContainer.getComponentByType(ComponentContainer.java:272)
at org.sonar.batch.scan.ProjectScanContainer.doBeforeStart(ProjectScanContainer.java:112)
at org.sonar.core.platform.ComponentContainer.startComponents(ComponentContainer.java:140)
at org.sonar.core.platform.ComponentContainer.execute(ComponentContainer.java:127)
at org.sonar.batch.task.ScanTask.execute(ScanTask.java:47)
at org.sonar.batch.task.TaskContainer.doAfterStart(TaskContainer.java:86)
at org.sonar.core.platform.ComponentContainer.startComponents(ComponentContainer.java:142)
at org.sonar.core.platform.ComponentContainer.execute(ComponentContainer.java:127)
at org.sonar.batch.bootstrap.GlobalContainer.executeTask(GlobalContainer.java:106)
at org.sonar.batch.bootstrapper.Batch.executeTask(Batch.java:119)
at org.sonarsource.scanner.api.internal.batch.BatchIsolatedLauncher.execute(BatchIsolatedLauncher.java:63)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.sonarsource.scanner.api.internal.IsolatedLauncherProxy.invoke(IsolatedLauncherProxy.java:60)
at com.sun.proxy.$Proxy0.execute(Unknown Source)
at org.sonarsource.scanner.api.EmbeddedScanner.doExecute(EmbeddedScanner.java:233)
at org.sonarsource.scanner.api.EmbeddedScanner.runAnalysis(EmbeddedScanner.java:151)
at org.sonarsource.scanner.cli.Main.runAnalysis(Main.java:123)
at org.sonarsource.scanner.cli.Main.execute(Main.java:77)
at org.sonarsource.scanner.cli.Main.main(Main.java:61)
Caused by: java.lang.IllegalStateException: Unable to load component class org.sonar.batch.repository.ProjectRepositories
at org.sonar.core.platform.ComponentContainer$ExtendedDefaultPicoContainer.getComponent(ComponentContainer.java:69)
at org.picocontainer.DefaultPicoContainer.getComponent(DefaultPicoContainer.java:632)
at org.picocontainer.parameters.BasicComponentParameter$1.resolveInstance(BasicComponentParameter.java:118)
at org.picocontainer.parameters.ComponentParameter$1.resolveInstance(ComponentParameter.java:136)
at org.picocontainer.injectors.SingleMemberInjector.getParameter(SingleMemberInjector.java:78)
at org.picocontainer.injectors.ConstructorInjector$CtorAndAdapters.getParameterArguments(ConstructorInjector.java:309)
at org.picocontainer.injectors.ConstructorInjector$1.run(ConstructorInjector.java:335)
at org.picocontainer.injectors.AbstractInjector$ThreadLocalCyclicDependencyGuard.observe(AbstractInjector.java:270)
at org.picocontainer.injectors.ConstructorInjector.getComponentInstance(ConstructorInjector.java:364)
at org.picocontainer.injectors.AbstractInjectionFactory$LifecycleAdapter.getComponentInstance(AbstractInjectionFactory.java:56)
at org.picocontainer.behaviors.AbstractBehavior.getComponentInstance(AbstractBehavior.java:64)
at org.picocontainer.behaviors.Stored.getComponentInstance(Stored.java:91)
at org.picocontainer.DefaultPicoContainer.getInstance(DefaultPicoContainer.java:699)
at org.picocontainer.DefaultPicoContainer.getComponent(DefaultPicoContainer.java:647)
at org.sonar.core.platform.ComponentContainer$ExtendedDefaultPicoContainer.getComponent(ComponentContainer.java:67)
... 23 more
Caused by: org.sonarqube.ws.client.HttpException: Error 500 on http://100.101.102.103:9000/batch/project.protobuf?key=scm.sesi.sm.ds
at org.sonarqube.ws.client.BaseResponse.failIfNotSuccessful(BaseResponse.java:34)
at org.sonar.batch.bootstrap.BatchWsClient.failIfUnauthorized(BatchWsClient.java:99)
at org.sonar.batch.bootstrap.BatchWsClient.call(BatchWsClient.java:69)
at org.sonar.batch.repository.DefaultProjectRepositoriesLoader.load(DefaultProjectRepositoriesLoader.java:58)
at org.sonar.batch.repository.ProjectRepositoriesProvider.provide(ProjectRepositoriesProvider.java:39)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.picocontainer.injectors.MethodInjector.invokeMethod(MethodInjector.java:129)
at org.picocontainer.injectors.MethodInjector.access$000(MethodInjector.java:39)
at org.picocontainer.injectors.MethodInjector$2.run(MethodInjector.java:113)
at org.picocontainer.injectors.AbstractInjector$ThreadLocalCyclicDependencyGuard.observe(AbstractInjector.java:270)
at org.picocontainer.injectors.MethodInjector.decorateComponentInstance(MethodInjector.java:120)
at org.picocontainer.injectors.CompositeInjector.decorateComponentInstance(CompositeInjector.java:58)
at org.picocontainer.injectors.Reinjector.reinject(Reinjector.java:142)
at org.picocontainer.injectors.ProviderAdapter.getComponentInstance(ProviderAdapter.java:96)
at org.picocontainer.DefaultPicoContainer.getInstance(DefaultPicoContainer.java:699)
at org.picocontainer.DefaultPicoContainer.getComponent(DefaultPicoContainer.java:647)
at org.sonar.core.platform.ComponentContainer$ExtendedDefaultPicoContainer.getComponent(ComponentContainer.java:67)
... 37 more
ERROR:
ERROR: Re-run SonarQube Scanner using the -X switch to enable full debug logging.
ERROR: SonarQube scanner exited with non-zero code: 1
sonar.log file error as follows
2017.10.11 05:03:13 ERROR web[o.s.s.w.WebServiceEngine] Fail to process request http://100.101.102.103:9000/batch/project.protobuf?key=scm.sesi.sm.ds
java.lang.NullPointerException: null
at com.google.protobuf.ByteString.copyFromUtf8(ByteString.java:321) ~[protobuf-java-3.0.0-beta-2.jar:na]
at com.google.protobuf.TextFormat.escapeText(TextFormat.java:1892) ~[protobuf-java-3.0.0-beta-2.jar:na]
at com.google.protobuf.TextFormat$Printer.printFieldValue(TextFormat.java:428) ~[protobuf-java-3.0.0-beta-2.jar:na]
at com.google.protobuf.TextFormat$Printer.printSingleField(TextFormat.java:368) ~[protobuf-java-3.0.0-beta-2.jar:na]
at com.google.protobuf.TextFormat$Printer.printField(TextFormat.java:327) ~[protobuf-java-3.0.0-beta-2.jar:na]
at com.google.protobuf.TextFormat$Printer.print(TextFormat.java:314) ~[protobuf-java-3.0.0-beta-2.jar:na]
at com.google.protobuf.TextFormat$Printer.printFieldValue(TextFormat.java:450) ~[protobuf-java-3.0.0-beta-2.jar:na]
at com.google.protobuf.TextFormat$Printer.printSingleField(TextFormat.java:368) ~[protobuf-java-3.0.0-beta-2.jar:na]
at com.google.protobuf.TextFormat$Printer.printField(TextFormat.java:324) ~[protobuf-java-3.0.0-beta-2.jar:na]
at com.google.protobuf.TextFormat$Printer.print(TextFormat.java:314) ~[protobuf-java-3.0.0-beta-2.jar:na]
at com.google.protobuf.TextFormat$Printer.access$400(TextFormat.java:288) ~[protobuf-java-3.0.0-beta-2.jar:na]
at com.google.protobuf.TextFormat.shortDebugString(TextFormat.java:113) ~[protobuf-java-3.0.0-beta-2.jar:na]
at org.sonarqube.ws.MessageFormatter.print(MessageFormatter.java:32) ~[sonar-ws-5.6.6.jar:na]
at org.sonar.server.ws.WsUtils.writeProtobuf(WsUtils.java:63) ~[sonar-server-5.6.6.jar:na]
at org.sonar.server.batch.ProjectAction.handle(ProjectAction.java:83) ~[sonar-server-5.6.6.jar:na]
at org.sonar.server.ws.WebServiceEngine.execute(WebServiceEngine.java:107) ~[sonar-server-5.6.6.jar:na]
at sun.reflect.GeneratedMethodAccessor206.invoke(Unknown Source) ~[na:na]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_111]
at java.lang.reflect.Method.invoke(Method.java:498) ~[na:1.8.0_111]
at org.jruby.javasupport.JavaMethod.invokeDirectWithExceptionHandling(JavaMethod.java:425) [jruby-complete-1.7.9.jar:na]
at org.jruby.javasupport.JavaMethod.invokeDirect(JavaMethod.java:292) [jruby-complete-1.7.9.jar:na]
at org.jruby.java.invokers.InstanceMethodInvoker.call(InstanceMethodInvoker.java:44) [jruby-complete-1.7.9.jar:na]
at org.jruby.runtime.callsite.CachingCallSite.call(CachingCallSite.java:70) [jruby-complete-1.7.9.jar:na]
at rubyjit.Api::JavaWsController$$index_E9F115BCB78D2E226E3015CDA52C1912485D30D0262463297.__file__(/opt/sonarqube-5.6.6/web/WEB-INF/app/controllers/api/java_ws_controller.rb:34) [jruby-complete-1.7.9.jar:na]
I have tried the below to solve this issue,
1) Rebooted the server then re-installed all the plugins.
2) Cleared the $SONARQUBE_HOME/data/es folder
3) Switched the quality profile(First default then changed to custom profile).
However still same problem persists, Now only thing pending is that I need to delete the $SONARQUBE_HOME/temp/. data from sonarqube server then after reboot I need to check the analyze.

Is 100.101.102.103 really the IP address of your SonarQube server? If so, you might have forgotten the sonar context path in the URL somewhere in your configuration.
It should probably be something like:
http://100.101.102.103:9000/sonar
Instead of:
http://100.101.102.103:9000/

This seems to be fixed in version 6.5. See this issue. Alternatively, you can delete your project and it will be recreated without issues.

java.lang.reflect.InvocationTargetException while running maven project in jenkins

This is the Stack trace tree , I am getting while running my maven project in Jenkins. I don't understand what is the problem with my code, maybe it is because of some plugins in Jenkins.
<===[JENKINS REMOTING CAPACITY]===>channel started
Executing Maven: -B -f /home/app/JavaEclipse/SampleMavenTest/pom.xml clean compile test
java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:483)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:330)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:238)
at jenkins.maven3.agent.Maven33Main.launch(Maven33Main.java:176)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:483)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:153)
at hudson.remoting.UserRequest.perform(UserRequest.java:50)
at hudson.remoting.Request$2.run(Request.java:332)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.lang.NoSuchFieldError: DEFAULT_USER_SETTINGS_FILE
at org.apache.maven.cli.DefaultMavenExecutionRequestBuilder.settings(DefaultMavenExecutionRequestBuilder.java:658)
at org.apache.maven.cli.DefaultMavenExecutionRequestBuilder.getMavenExecutionRequest(DefaultMavenExecutionRequestBuilder.java:149)
at org.jvnet.hudson.maven3.launcher.Maven33Launcher.getMavenExecutionRequest(Maven33Launcher.java:150)
at org.jvnet.hudson.maven3.launcher.Maven33Launcher.main(Maven33Launcher.java:127)
... 21 more
ERROR: Failed to parse POMs
channel stopped

Jenkins Cannot deploy to artifactory (database constraint error)

I am using Artifactory OSS v4.5.1, Jenkins v1.648, Gradle v2.9, on Ubuntu 14.04
I am using artifactory plugin for jenkins v2.4.7 to deploy an artifact generated by gradle build script
When I run gradle artifactoryPublish by hand, everything is ok, but when i try to deploy from jenkins, the jar file deploys fine, but the build info cause an error
here is jenkins console output:
Jenkins Artifactory Plugin version: 2.4.7
Jenkins Artifactory Plugin version: 2.4.7
[Gradle] - Launching build.
[workspace] $ gradle jar artifactoryPublish
[buildinfo] Properties file found at '/tmp/buildInfo1752901429055581915.properties'
:compileJava UP-TO-DATE
:processResources UP-TO-DATE
:classes UP-TO-DATE
:jar UP-TO-DATE
:generatePomFileForMavenJavaPublication
:artifactoryPublish
Deploying artifact: http://localhost:8081/artifactory/gradle-local/org/commerceforge/estore/0.0.1/estore-0.0.1.jar
Deploying build descriptor to: http://localhost:8081/artifactory/api/build
Build successfully deployed. Browse it in Artifactory under http://localhost:8081/artifactory/webapp/builds/Tradenity/21
BUILD SUCCESSFUL
Total time: 11.237 secs
This build could be faster, please consider using the Gradle Daemon: https://docs.gradle.org/2.9/userguide/gradle_daemon.html
Build step 'Invoke Gradle script' changed build result to SUCCESS
Deploying build info to: http://localhost:8081/artifactory/api/build
ERROR: Could not publish build-info: Failed to send build descriptor : HTTP response code: 500. HTTP response message: Internal Server Error
java.io.IOException: Could not publish build-info: Failed to send build descriptor : HTTP response code: 500. HTTP response message: Internal Server Error
at org.jfrog.build.extractor.clientConfiguration.client.ArtifactoryBuildInfoClient.sendBuildInfo(ArtifactoryBuildInfoClient.java:244)
at org.jfrog.hudson.generic.GenericBuildInfoDeployer.deploy(GenericBuildInfoDeployer.java:62)
at org.jfrog.hudson.generic.ArtifactoryGenericConfigurator$1.tearDown(ArtifactoryGenericConfigurator.java:344)
at hudson.model.Build$BuildExecution.doRun(Build.java:173)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:534)
at hudson.model.Run.execute(Run.java:1738)
at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:43)
at hudson.model.ResourceController.execute(ResourceController.java:98)
at hudson.model.Executor.run(Executor.java:410)
Finished: FAILURE
when i refer to artifactory log, it seems like a database eror:
2016-03-01 12:05:22,150 [http-nio-8081-exec-3] [INFO ] (o.a.e.UploadServiceImpl:453) - Deploy to 'gradle-local:org/commerceforge/estore/0.0.1/estore-0.0.1.jar' Content-Length: 0
2016-03-01 12:05:24,120 [http-nio-8081-exec-1] [INFO ] (o.a.r.r.c.BuildResource:296) - Adding build 'Tradenity #22'
2016-03-01 12:05:24,302 [http-nio-8081-exec-1] [INFO ] (o.a.r.r.c.BuildResource:313) - Added build 'Tradenity #22'
2016-03-01 12:05:24,686 [http-nio-8081-exec-2] [INFO ] (o.a.r.r.c.BuildResource:296) - Adding build 'Tradenity #22'
2016-03-01 12:05:24,749 [http-nio-8081-exec-2] [ERROR] (o.a.r.c.e.GlobalExceptionMapper:46) - Could not insert build Build{version='1.0.1', name='Tradenity', number='22', type=GENERIC, buildAgent=Generic/Generic, agent=hudson/1.648, started='2016-03-01T12:05:06.642+0200', durationMillis=18018, principal='anonymous', artifactoryPrincipal='admin', artifactoryPluginVersion='2.4.7', url='http://localhost:8088/job/Tradenity/22/', parentName='null', parentNumber='null', vcsRevision='7fdaa715b604d2a27eed956af5560a06a1d6ebe8', vcsUrl='null', parentBuildId='null', licenseControl=org.jfrog.build.api.LicenseControl#399632b2, buildRetention=org.jfrog.build.api.BuildRetention#26e7505f, runParameters=null, modules=[org.jfrog.build.api.Module#39c3f4dc], statuses=null, buildDependencies=[], issues=null, governance=org.jfrog.build.api.Governance#533a0edd}
org.artifactory.storage.StorageException: Could not insert build Build{version='1.0.1', name='Tradenity', number='22', type=GENERIC, buildAgent=Generic/Generic, agent=hudson/1.648, started='2016-03-01T12:05:06.642+0200', durationMillis=18018, principal='anonymous', artifactoryPrincipal='admin', artifactoryPluginVersion='2.4.7', url='http://localhost:8088/job/Tradenity/22/', parentName='null', parentNumber='null', vcsRevision='7fdaa715b604d2a27eed956af5560a06a1d6ebe8', vcsUrl='null', parentBuildId='null', licenseControl=org.jfrog.build.api.LicenseControl#399632b2, buildRetention=org.jfrog.build.api.BuildRetention#26e7505f, runParameters=null, modules=[org.jfrog.build.api.Module#39c3f4dc], statuses=null, buildDependencies=[], issues=null, governance=org.jfrog.build.api.Governance#533a0edd}
at org.artifactory.storage.db.build.service.BuildStoreServiceImpl.addBuild(BuildStoreServiceImpl.java:122) ~[artifactory-storage-db-4.5.1.jar:na]
at org.artifactory.build.BuildServiceImpl.addBuild(BuildServiceImpl.java:193) ~[artifactory-core-4.5.1.jar:na]
at sun.reflect.GeneratedMethodAccessor375.invoke(Unknown Source) ~[na:na]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_66]
at java.lang.reflect.Method.invoke(Method.java:497) ~[na:1.8.0_66]
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:317) ~[spring-aop-4.1.5.RELEASE.jar:4.1.5.RELEASE]
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) ~[spring-aop-4.1.5.RELEASE.jar:4.1.5.RELEASE]
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) ~[spring-aop-4.1.5.RELEASE.jar:4.1.5.RELEASE]
at org.artifactory.storage.fs.lock.aop.LockingAdvice.invoke(LockingAdvice.java:76) ~[artifactory-storage-common-4.5.1.jar:na]
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) ~[spring-aop-4.1.5.RELEASE.jar:4.1.5.RELEASE]
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:207) ~[spring-aop-4.1.5.RELEASE.jar:4.1.5.RELEASE]
at com.sun.proxy.$Proxy98.addBuild(Unknown Source) ~[na:na]
at org.artifactory.build.BuildServiceImpl.addBuild(BuildServiceImpl.java:172) ~[artifactory-core-4.5.1.jar:na]
at sun.reflect.GeneratedMethodAccessor374.invoke(Unknown Source) ~[na:na]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_66]
at java.lang.reflect.Method.invoke(Method.java:497) ~[na:1.8.0_66]
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:317) ~[spring-aop-4.1.5.RELEASE.jar:4.1.5.RELEASE]
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) ~[spring-aop-4.1.5.RELEASE.jar:4.1.5.RELEASE]
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) ~[spring-aop-4.1.5.RELEASE.jar:4.1.5.RELEASE]
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) ~[spring-tx-4.1.5.RELEASE.jar:4.1.5.RELEASE]
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:281) ~[spring-tx-4.1.5.RELEASE.jar:4.1.5.RELEASE]
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) ~[spring-tx-4.1.5.RELEASE.jar:4.1.5.RELEASE]
at org.artifactory.storage.fs.lock.aop.LockingAdvice.invoke(LockingAdvice.java:74) ~[artifactory-storage-common-4.5.1.jar:na]
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) ~[spring-aop-4.1.5.RELEASE.jar:4.1.5.RELEASE]
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:207) ~[spring-aop-4.1.5.RELEASE.jar:4.1.5.RELEASE]
at com.sun.proxy.$Proxy98.addBuild(Unknown Source) ~[na:na]
at org.artifactory.rest.resource.ci.BuildResource.addBuild(BuildResource.java:305) ~[artifactory-rest-4.5.1.jar:na]
at sun.reflect.GeneratedMethodAccessor373.invoke(Unknown Source) ~[na:na]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_66]
at java.lang.reflect.Method.invoke(Method.java:497) ~[na:1.8.0_66]
at com.sun.jersey.spi.container.JavaMethodInvokerFactory$1.invoke(JavaMethodInvokerFactory.java:60) ~[jersey-server-1.19.jar:1.19]
at com.sun.jersey.server.impl.model.method.dispatch.AbstractResourceMethodDispatchProvider$VoidOutInvoker._dispatch(AbstractResourceMethodDispatchProvider.java:167) ~[jersey-server-1.19.jar:1.19]
at com.sun.jersey.server.impl.model.method.dispatch.ResourceJavaMethodDispatcher.dispatch(ResourceJavaMethodDispatcher.java:75) ~[jersey-server-1.19.jar:1.19]
at com.sun.jersey.server.impl.uri.rules.HttpMethodRule.accept(HttpMethodRule.java:302) ~[jersey-server-1.19.jar:1.19]
at com.sun.jersey.server.impl.uri.rules.ResourceClassRule.accept(ResourceClassRule.java:108) ~[jersey-server-1.19.jar:1.19]
at com.sun.jersey.server.impl.uri.rules.RightHandPathRule.accept(RightHandPathRule.java:147) ~[jersey-server-1.19.jar:1.19]
at com.sun.jersey.server.impl.uri.rules.RootResourceClassesRule.accept(RootResourceClassesRule.java:84) ~[jersey-server-1.19.jar:1.19]
at com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1542) [jersey-server-1.19.jar:1.19]
at com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1473) [jersey-server-1.19.jar:1.19]
at com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1419) [jersey-server-1.19.jar:1.19]
at com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1409) [jersey-server-1.19.jar:1.19]
at com.sun.jersey.spi.container.servlet.WebComponent.service(WebComponent.java:409) [jersey-servlet-1.19.jar:1.19]
at com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:558) [jersey-servlet-1.19.jar:1.19]
at com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:733) [jersey-servlet-1.19.jar:1.19]
at javax.servlet.http.HttpServlet.service(HttpServlet.java:729) [servlet-api.jar:na]
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:291) [catalina.jar:8.0.22]
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) [catalina.jar:8.0.22]
at org.artifactory.webapp.servlet.RepoFilter.execute(RepoFilter.java:198) [artifactory-web-application-4.5.1.jar:na]
at org.artifactory.webapp.servlet.RepoFilter.doFilter(RepoFilter.java:89) [artifactory-web-application-4.5.1.jar:na]
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:239) [catalina.jar:8.0.22]
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) [catalina.jar:8.0.22]
at org.artifactory.webapp.servlet.AccessFilter.useAuthentication(AccessFilter.java:334) [artifactory-web-application-4.5.1.jar:na]
at org.artifactory.webapp.servlet.AccessFilter.authenticateAndExecute(AccessFilter.java:234) [artifactory-web-application-4.5.1.jar:na]
at org.artifactory.webapp.servlet.AccessFilter.doFilterInternal(AccessFilter.java:190) [artifactory-web-application-4.5.1.jar:na]
at org.artifactory.webapp.servlet.AccessFilter.doFilter(AccessFilter.java:156) [artifactory-web-application-4.5.1.jar:na]
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:239) [catalina.jar:8.0.22]
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) [catalina.jar:8.0.22]
at org.artifactory.webapp.servlet.RequestFilter.doFilter(RequestFilter.java:65) [artifactory-web-application-4.5.1.jar:na]
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:239) [catalina.jar:8.0.22]
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) [catalina.jar:8.0.22]
at org.artifactory.webapp.servlet.ArtifactoryFilter.doFilter(ArtifactoryFilter.java:109) [artifactory-web-application-4.5.1.jar:na]
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:239) [catalina.jar:8.0.22]
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) [catalina.jar:8.0.22]
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219) [catalina.jar:8.0.22]
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:106) [catalina.jar:8.0.22]
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:142) [catalina.jar:8.0.22]
at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:79) [catalina.jar:8.0.22]
at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:88) [catalina.jar:8.0.22]
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:518) [catalina.jar:8.0.22]
at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1091) [tomcat-coyote.jar:8.0.22]
at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:668) [tomcat-coyote.jar:8.0.22]
at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1521) [tomcat-coyote.jar:8.0.22]
at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.run(NioEndpoint.java:1478) [tomcat-coyote.jar:8.0.22]
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) [na:1.8.0_66]
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) [na:1.8.0_66]
at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61) [tomcat-util.jar:8.0.22]
at java.lang.Thread.run(Thread.java:745) [na:1.8.0_66]
Caused by: java.sql.SQLIntegrityConstraintViolationException: The statement was aborted because it would have caused a duplicate key value in a unique or primary key constraint or unique index identified by 'BUILDS_NAME_NUMBER_DATE_IDX' defined on 'BUILDS'.
at org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.jdbc.Util.generateCsSQLException(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.jdbc.TransactionResourceImpl.wrapInSQLException(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.jdbc.TransactionResourceImpl.handleException(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.jdbc.EmbedConnection.handleException(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.jdbc.ConnectionChild.handleException(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.jdbc.EmbedStatement.executeStatement(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.jdbc.EmbedPreparedStatement.executeStatement(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.jdbc.EmbedPreparedStatement.executeLargeUpdate(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.jdbc.EmbedPreparedStatement.executeUpdate(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.artifactory.storage.db.util.JdbcHelper.executeUpdate(JdbcHelper.java:160) ~[artifactory-storage-db-4.5.1.jar:na]
at org.artifactory.storage.db.build.dao.BuildsDao.createBuild(BuildsDao.java:65) ~[artifactory-storage-db-4.5.1.jar:na]
at org.artifactory.storage.db.build.service.BuildStoreServiceImpl.addBuild(BuildStoreServiceImpl.java:119) ~[artifactory-storage-db-4.5.1.jar:na]
... 76 common frames omitted
Caused by: org.apache.derby.iapi.error.StandardException: The statement was aborted because it would have caused a duplicate key value in a unique or primary key constraint or unique index identified by 'BUILDS_NAME_NUMBER_DATE_IDX' defined on 'BUILDS'.
at org.apache.derby.iapi.error.StandardException.newException(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.iapi.error.StandardException.newException(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.sql.execute.IndexChanger.insertAndCheckDups(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.sql.execute.IndexChanger.doInsert(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.sql.execute.IndexChanger.insert(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.sql.execute.IndexSetChanger.insert(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.sql.execute.RowChangerImpl.insertRow(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.sql.execute.InsertResultSet.normalInsertCore(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.sql.execute.InsertResultSet.open(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.sql.GenericPreparedStatement.executeStmt(Unknown Source) ~[derby-10.11.1.1.jar:na]
at org.apache.derby.impl.sql.GenericPreparedStatement.execute(Unknown Source) ~[derby-10.11.1.1.jar:na]
... 83 common frames omitted

Deploying Grails WAR project to Tomcat 6 server

I have a Grails project, and use IntelliJ, and the project runs fine with Intellij.
I can create a WAR using Intellij BUILD then, MAKE GRAILS WEB ARCHIVE.
I have Virtual Box running Ubuntu 14.04, with Tomcat 6 on it.
Ok now to the issue. I'm running this chain of commands
/etc/init.d/tomcat6 stop;
rm -rf /var/lib/tomcat6/webapps/ROOT*;
cp ROOT.war /var/lib/tomcat6/webapps/.;
/etc/init.d/tomcat6 start;
tail -f /var/lib/tomcat6/logs/catalina.out
And getting these errors
INFO: validateJarFile(/var/lib/tomcat6/webapps/ROOT/WEB-INF/lib/servlet-api-2.3.jar) - jar not loaded. See Servlet Spec 2.3, section 9.7.2. Offending class: javax/servlet/Servlet.class
- Sanitizing stacktrace:
java.lang.IllegalArgumentException: Malformed \uxxxx encoding.
at java.util.Properties.loadConvert(Properties.java:568)
at java.util.Properties.load0(Properties.java:391)
at java.util.Properties.load(Properties.java:341)
at java_util_Properties$load.call(Unknown Source)
at org.codehaus.groovy.runtime.callsite.CallSiteArray.defaultCall(CallSiteArray.java:40)
at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:116)
at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:124)
at Config.run(Config.groovy:93)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.codehaus.groovy.reflection.CachedMethod.invoke(CachedMethod.java:90)
at org.codehaus.groovy.reflection.CachedMethod$invoke.call(Unknown Source)
at org.codehaus.groovy.runtime.callsite.CallSiteArray.defaultCall(CallSiteArray.java:40)
at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:116)
at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:128)
at groovy.util.ConfigSlurper$_parse_closure5.doCall(ConfigSlurper.groovy:238)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.codehaus.groovy.reflection.CachedMethod.invoke(CachedMethod.java:90)
at org.codehaus.groovy.runtime.metaclass.ClosureMetaMethod.invoke(ClosureMetaMethod.java:80)
at groovy.lang.ExpandoMetaClass.invokeMethod(ExpandoMetaClass.java:1068)
at groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:886)
at groovy.lang.DelegatingMetaClass.invokeMethod(DelegatingMetaClass.java:149)
at org.codehaus.groovy.runtime.callsite.PogoMetaClassSite.call(PogoMetaClassSite.java:39)
at org.codehaus.groovy.runtime.callsite.CallSiteArray.defaultCall(CallSiteArray.java:40)
at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:116)
at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:120)
at groovy.util.ConfigSlurper.parse(ConfigSlurper.groovy:257)
at groovy.util.ConfigSlurper$parse$1.callCurrent(Unknown Source)
at org.codehaus.groovy.runtime.callsite.CallSiteArray.defaultCallCurrent(CallSiteArray.java:44)
at org.codehaus.groovy.runtime.callsite.AbstractCallSite.callCurrent(AbstractCallSite.java:141)
at org.codehaus.groovy.runtime.callsite.AbstractCallSite.callCurrent(AbstractCallSite.java:153)
at groovy.util.ConfigSlurper.parse(ConfigSlurper.groovy:138)
at groovy.util.ConfigSlurper$parse$0.callCurrent(Unknown Source)
at org.codehaus.groovy.runtime.callsite.CallSiteArray.defaultCallCurrent(CallSiteArray.java:44)
at org.codehaus.groovy.runtime.callsite.AbstractCallSite.callCurrent(AbstractCallSite.java:141)
at org.codehaus.groovy.runtime.callsite.AbstractCallSite.callCurrent(AbstractCallSite.java:149)
at groovy.util.ConfigSlurper.parse(ConfigSlurper.groovy:129)
at groovy.util.ConfigSlurper$parse.call(Unknown Source)
at org.codehaus.groovy.runtime.callsite.CallSiteArray.defaultCall(CallSiteArray.java:40)
at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:116)
at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:124)
at org.codehaus.groovy.grails.commons.cfg.ConfigurationHelper.loadConfigFromClasspath(ConfigurationHelper.groovy:62)
at org.codehaus.groovy.grails.web.util.Log4jConfigListener.contextInitialized(Log4jConfigListener.java:54)
at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4210)
at org.apache.catalina.core.StandardContext.start(StandardContext.java:4709)
at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:799)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:779)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:583)
at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:943)
at org.apache.catalina.startup.HostConfig.deployWARs(HostConfig.java:778)
at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:504)
at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1317)
at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:324)
at org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:142)
at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1065)
at org.apache.catalina.core.StandardHost.start(StandardHost.java:822)
at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1057)
at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:463)
at org.apache.catalina.core.StandardService.start(StandardService.java:525)
at org.apache.catalina.core.StandardServer.start(StandardServer.java:754)
at org.apache.catalina.startup.Catalina.start(Catalina.java:595)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289)
at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414)
- Error loading application Config: Malformed \uxxxx encoding.
java.lang.IllegalArgumentException: Malformed \uxxxx encoding.
at java.util.Properties.loadConvert(Properties.java:568)
at java.util.Properties.load0(Properties.java:391)
at java.util.Properties.load(Properties.java:341)
at java_util_Properties$load.call(Unknown Source)
at Config.run(Config.groovy:93)
log4j:ERROR Error initializing log4j: Malformed \uxxxx encoding.
java.lang.IllegalArgumentException: Malformed \uxxxx encoding.
at java.util.Properties.loadConvert(Properties.java:568)
at java.util.Properties.load0(Properties.java:391)
at java.util.Properties.load(Properties.java:341)
at java_util_Properties$load.call(Unknown Source)
at Config.run(Config.groovy:93)
- Root WebApplicationContext: initialization started
- Refreshing Root WebApplicationContext: startup date [Fri Jan 15 14:17:52 MST 2016]; root of context hierarchy
- Loading XML bean definitions from ServletContext resource [/WEB-INF/applicationContext.xml]
- Pre-instantiating singletons in org.springframework.beans.factory.support.DefaultListableBeanFactory#60848eb2: defining beans [grailsApplication,pluginManager,grailsConfigurator,grailsResourceLoader,grailsResourceHolder,characterEncodingFilter]; root of factory hierarchy
- Loading Grails application with information from descriptor.
- No reloading, using standard classloader.
- Class with name [SampleJob] was not found, and hence not loaded. Possible empty class or script definition?
- Sanitizing stacktrace:
java.lang.IllegalArgumentException: Malformed \uxxxx encoding.
at java.util.Properties.loadConvert(Properties.java:568)
at java.util.Properties.load0(Properties.java:391)
at java.util.Properties.load(Properties.java:341)
at java_util_Properties$load.call(Unknown Source)
at Config.run(Config.groovy:93)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.codehaus.groovy.reflection.CachedMethod.invoke(CachedMethod.java:90)
at org.codehaus.groovy.reflection.CachedMethod$invoke.call(Unknown Source)
at org.codehaus.groovy.runtime.callsite.CallSiteArray.defaultCall(CallSiteArray.java:40)
at org.codehaus.groovy.reflection.CachedMethod$invoke.call(Unknown Source)
at groovy.util.ConfigSlurper$_parse_closure5.doCall(ConfigSlurper.groovy:238)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.codehaus.groovy.reflection.CachedMethod.invoke(CachedMethod.java:90)
at org.codehaus.groovy.runtime.metaclass.ClosureMetaMethod.invoke(ClosureMetaMethod.java:80)
at groovy.lang.ExpandoMetaClass.invokeMethod(ExpandoMetaClass.java:1068)
at groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:886)
at org.codehaus.groovy.runtime.callsite.PogoMetaClassSite.call(PogoMetaClassSite.java:39)
at org.codehaus.groovy.runtime.callsite.CallSiteArray.defaultCall(CallSiteArray.java:40)
at org.codehaus.groovy.runtime.callsite.PogoMetaClassSite.call(PogoMetaClassSite.java:54)
at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:120)
at groovy.util.ConfigSlurper.parse(ConfigSlurper.groovy:257)
at groovy.util.ConfigSlurper$parse$1.callCurrent(Unknown Source)
at org.codehaus.groovy.runtime.callsite.CallSiteArray.defaultCallCurrent(CallSiteArray.java:44)
at groovy.util.ConfigSlurper$parse$1.callCurrent(Unknown Source)
at groovy.util.ConfigSlurper.parse(ConfigSlurper.groovy:138)
at groovy.util.ConfigSlurper$parse$0.callCurrent(Unknown Source)
at groovy.util.ConfigSlurper.parse(ConfigSlurper.groovy:129)
at groovy.util.ConfigSlurper$parse.call(Unknown Source)
at org.codehaus.groovy.grails.commons.cfg.ConfigurationHelper.loadConfigFromClasspath(ConfigurationHelper.groovy:62)
at org.codehaus.groovy.grails.commons.DefaultGrailsApplication.getConfig(DefaultGrailsApplication.java:395)
at org.codehaus.groovy.grails.plugins.DefaultGrailsPluginManager.setPluginFilter(DefaultGrailsPluginManager.java:196)
at org.codehaus.groovy.grails.plugins.DefaultGrailsPluginManager.<init>(DefaultGrailsPluginManager.java:180)
at org.codehaus.groovy.grails.plugins.GrailsPluginManagerFactoryBean.afterPropertiesSet(GrailsPluginManagerFactoryBean.java:102)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1477)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1417)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:519)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:456)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:291)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:288)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:190)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:563)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:895)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:425)
at org.springframework.web.context.ContextLoader.createWebApplicationContext(ContextLoader.java:276)
at org.codehaus.groovy.grails.web.context.GrailsContextLoader.createWebApplicationContext(GrailsContextLoader.java:70)
at org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:197)
at org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:47)
at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4210)
at org.apache.catalina.core.StandardContext.start(StandardContext.java:4709)
at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:799)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:779)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:583)
at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:943)
at org.apache.catalina.startup.HostConfig.deployWARs(HostConfig.java:778)
at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:504)
at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1317)
at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:324)
at org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:142)
at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1065)
at org.apache.catalina.core.StandardHost.start(StandardHost.java:822)
at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1057)
at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:463)
at org.apache.catalina.core.StandardService.start(StandardService.java:525)
at org.apache.catalina.core.StandardServer.start(StandardServer.java:754)
at org.apache.catalina.startup.Catalina.start(Catalina.java:595)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289)
at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414)
- Error loading application Config: Malformed \uxxxx encoding.
java.lang.IllegalArgumentException: Malformed \uxxxx encoding.
at java.util.Properties.loadConvert(Properties.java:568)
at java.util.Properties.load0(Properties.java:391)
at java.util.Properties.load(Properties.java:341)
at java_util_Properties$load.call(Unknown Source)
at Config.run(Config.groovy:93)
- Destroying singletons in org.springframework.beans.factory.support.DefaultListableBeanFactory#60848eb2: defining beans [grailsApplication,pluginManager,grailsConfigurator,grailsResourceLoader,grailsResourceHolder,characterEncodingFilter]; root of factory hierarchy
- Sanitizing stacktrace:
java.lang.IllegalArgumentException: Malformed \uxxxx encoding.
at java.util.Properties.loadConvert(Properties.java:568)
at java.util.Properties.load0(Properties.java:391)
at java.util.Properties.load(Properties.java:341)
at java_util_Properties$load.call(Unknown Source)
at Config.run(Config.groovy:93)
- Context initialization failed
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'pluginManager' defined in ServletContext resource [/WEB-INF/applicationContext.xml]: Invocation of init method failed; nested exception is java.lang.IllegalArgumentException: Malformed \uxxxx encoding.
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1420)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:519)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:456)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:291)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:288)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:190)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:563)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:895)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:425)
at org.springframework.web.context.ContextLoader.createWebApplicationContext(ContextLoader.java:276)
at org.codehaus.groovy.grails.web.context.GrailsContextLoader.createWebApplicationContext(GrailsContextLoader.java:70)
at org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:197)
at org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:47)
at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4210)
at org.apache.catalina.core.StandardContext.start(StandardContext.java:4709)
at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:799)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:779)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:583)
at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:943)
at org.apache.catalina.startup.HostConfig.deployWARs(HostConfig.java:778)
at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:504)
at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1317)
at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:324)
at org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:142)
at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1065)
at org.apache.catalina.core.StandardHost.start(StandardHost.java:822)
at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1057)
at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:463)
at org.apache.catalina.core.StandardService.start(StandardService.java:525)
at org.apache.catalina.core.StandardServer.start(StandardServer.java:754)
at org.apache.catalina.startup.Catalina.start(Catalina.java:595)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289)
at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414)
Caused by: java.lang.IllegalArgumentException: Malformed \uxxxx encoding.
at java.util.Properties.loadConvert(Properties.java:568)
at java.util.Properties.load0(Properties.java:391)
at java.util.Properties.load(Properties.java:341)
at java_util_Properties$load.call(Unknown Source)
at Config.run(Config.groovy:93)
Jan 15, 2016 2:17:57 PM org.apache.catalina.core.StandardContext start
SEVERE: Error listenerStart
Jan 15, 2016 2:17:57 PM org.apache.catalina.core.StandardContext start
SEVERE: Context [] startup failed due to previous errors
Jan 15, 2016 2:17:58 PM org.apache.coyote.http11.Http11Protocol start
INFO: Starting Coyote HTTP/1.1 on http-8080
Jan 15, 2016 2:17:58 PM org.apache.catalina.startup.Catalina start
INFO: Server startup in 13596 ms
From what I've researched It seems that "servlet-api-2.3.jar" is referenced more then once in one of my dependency files or lib folders, and it's being compiled twice. But I can't seem to find it referenced anywhere.

I think it's rather encoding issue. Please check out your Config.groovy file at line:93. Is there any non-unicode character?

Jenkins marking a build as UNSTABLE even if all tests are passing

Jenkins marking a Build as UNSTABLE even if all tests are passing.
Error message says: Failed to read test report file XML.
Failed to read test report file /scratch/jenkins/workspace/ngcmonitor/target/surefire-reports/TEST-myngconnect_server_status.qa3.Test_Existing_Credentials_Check_QA3.xml
org.dom4j.DocumentException: org.dom4j.DocumentFactory cannot be cast to org.dom4j.DocumentFactory Nested exception: org.dom4j.DocumentFactory cannot be cast to org.dom4j.DocumentFactory
at org.dom4j.io.SAXReader.read(SAXReader.java:484)
at org.dom4j.io.SAXReader.read(SAXReader.java:264)
at hudson.tasks.junit.SuiteResult.parse(SuiteResult.java:130)
at hudson.tasks.junit.TestResult.parse(TestResult.java:274)
at hudson.tasks.junit.TestResult.parsePossiblyEmpty(TestResult.java:230)
at hudson.tasks.junit.TestResult.parse(TestResult.java:199)
at hudson.maven.reporters.SurefireArchiver.postExecute(SurefireArchiver.java:148)
at hudson.maven.Maven3Builder$MavenExecutionListener.recordMojoEnded(Maven3Builder.java:628)
at hudson.maven.Maven3Builder$MavenExecutionListener.mojoSucceeded(Maven3Builder.java:610)
at hudson.maven.Maven3Builder$JenkinsEventSpy.onEvent(Maven3Builder.java:306)
at org.apache.maven.eventspy.internal.EventSpyDispatcher.onEvent(EventSpyDispatcher.java:108)
at org.apache.maven.eventspy.internal.EventSpyExecutionListener.mojoSucceeded(EventSpyExecutionListener.java:131)
at org.apache.maven.lifecycle.internal.DefaultExecutionEventCatapult.fire(DefaultExecutionEventCatapult.java:87)
at org.apache.maven.lifecycle.internal.DefaultExecutionEventCatapult.fire(DefaultExecutionEventCatapult.java:42)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:227)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145)
at org.apache.maven.lifecycle.internal.MojoExecutor.executeForkedExecutions(MojoExecutor.java:364)
at org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeForkedExecutions(DefaultLifecycleExecutor.java:173)
at org.apache.maven.reporting.exec.DefaultMavenReportExecutor.buildReportPlugin(DefaultMavenReportExecutor.java:273)
at org.apache.maven.reporting.exec.DefaultMavenReportExecutor.buildMavenReports(DefaultMavenReportExecutor.java:154)
at org.apache.maven.plugins.site.AbstractSiteRenderingMojo.getReports(AbstractSiteRenderingMojo.java:235)
at org.apache.maven.plugins.site.SiteMojo.execute(SiteMojo.java:121)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:106)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59)
at org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:317)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:152)
at org.jvnet.hudson.maven3.launcher.Maven31Launcher.main(Maven31Launcher.java:132)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:330)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:238)
at jenkins.maven3.agent.Maven31Main.launch(Maven31Main.java:181)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:134)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:69)
at hudson.remoting.UserRequest.perform(UserRequest.java:118)
at hudson.remoting.UserRequest.perform(UserRequest.java:48)
at hudson.remoting.Request$2.run(Request.java:328)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:72)
at java.util.concurrent.FutureTask.run(FutureTask.java:262)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:744)
Caused by: java.lang.ClassCastException: org.dom4j.DocumentFactory cannot be cast to org.dom4j.DocumentFactory
at org.dom4j.DocumentFactory.getInstance(DocumentFactory.java:97)
at org.dom4j.io.SAXReader.getDocumentFactory(SAXReader.java:645)
at org.dom4j.io.SAXReader.createContentHandler(SAXReader.java:969)
at org.dom4j.io.SAXReader.read(SAXReader.java:449)
... 54 more
Nested exception:
java.lang.ClassCastException: org.dom4j.DocumentFactory cannot be cast to org.dom4j.DocumentFactory
at org.dom4j.DocumentFactory.getInstance(DocumentFactory.java:97)
at org.dom4j.io.SAXReader.getDocumentFactory(SAXReader.java:645)
at org.dom4j.io.SAXReader.createContentHandler(SAXReader.java:969)
at org.dom4j.io.SAXReader.read(SAXReader.java:449)
at org.dom4j.io.SAXReader.read(SAXReader.java:264)
at hudson.tasks.junit.SuiteResult.parse(SuiteResult.java:130)
at hudson.tasks.junit.TestResult.parse(TestResult.java:274)
at hudson.tasks.junit.TestResult.parsePossiblyEmpty(TestResult.java:230)
at hudson.tasks.junit.TestResult.parse(TestResult.java:199)
at hudson.maven.reporters.SurefireArchiver.postExecute(SurefireArchiver.java:148)
at hudson.maven.Maven3Builder$MavenExecutionListener.recordMojoEnded(Maven3Builder.java:628)
at hudson.maven.Maven3Builder$MavenExecutionListener.mojoSucceeded(Maven3Builder.java:610)
at hudson.maven.Maven3Builder$JenkinsEventSpy.onEvent(Maven3Builder.java:306)
at org.apache.maven.eventspy.internal.EventSpyDispatcher.onEvent(EventSpyDispatcher.java:108)
at org.apache.maven.eventspy.internal.EventSpyExecutionListener.mojoSucceeded(EventSpyExecutionListener.java:131)
at org.apache.maven.lifecycle.internal.DefaultExecutionEventCatapult.fire(DefaultExecutionEventCatapult.java:87)
at org.apache.maven.lifecycle.internal.DefaultExecutionEventCatapult.fire(DefaultExecutionEventCatapult.java:42)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:227)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145)
at org.apache.maven.lifecycle.internal.MojoExecutor.executeForkedExecutions(MojoExecutor.java:364)
at org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeForkedExecutions(DefaultLifecycleExecutor.java:173)
at org.apache.maven.reporting.exec.DefaultMavenReportExecutor.buildReportPlugin(DefaultMavenReportExecutor.java:273)
at org.apache.maven.reporting.exec.DefaultMavenReportExecutor.buildMavenReports(DefaultMavenReportExecutor.java:154)
at org.apache.maven.plugins.site.AbstractSiteRenderingMojo.getReports(AbstractSiteRenderingMojo.java:235)
at org.apache.maven.plugins.site.SiteMojo.execute(SiteMojo.java:121)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:106)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59)
at org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:317)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:152)
at org.jvnet.hudson.maven3.launcher.Maven31Launcher.main(Maven31Launcher.java:132)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:330)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:238)
at jenkins.maven3.agent.Maven31Main.launch(Maven31Main.java:181)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:134)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:69)
at hudson.remoting.UserRequest.perform(UserRequest.java:118)
at hudson.remoting.UserRequest.perform(UserRequest.java:48)
at hudson.remoting.Request$2.run(Request.java:328)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:72)
at java.util.concurrent.FutureTask.run(FutureTask.java:262)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:744)
Please advise

That xml is a JUnit test report, so if you want to prevent Jenkins from parsing it, you should remove the JUnit performance test report step from your job, or any other step that relies on these reports generated by the maven surefire plugin.
The exception you are getting is most probably a classpath issue having to do with plugins packing and relying on different versions of the dom4j library. This issue could be the same as yours or related, and may give you a starting point should you want to further investigate the problem.

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