I am new to Neo4j and doing some test on Ubuntu. I was wondering where does Neo4j store the data. Where do they store the created nodes and relationships?
This should help: dpkg -L neo4j
config
/etc/neo4j/neo4j.properties
/etc/neo4j/neo4j-wrapper.conf
/etc/neo4j/neo4j-http-logging.xml
/etc/neo4j/neo4j-server.properties
logs
/var/log/neo4j
/var/lib/neo4j/data/graph.db/messages.log
binaries
/usr/bin/neo4j-shell
/usr/bin/neo4j
data
/var/lib/neo4j/data/graph.db
store-files
nodes, properties, arrays, strings, relationship-groups, relationships
-rw-r--r-- 1 neo4j nogroup 0 Jul 30 20:41 neostore.nodestore.db
-rw-r--r-- 1 neo4j nogroup 0 Jul 30 20:41 neostore.propertystore.db
-rw-r--r-- 1 neo4j nogroup 128 Jul 30 20:41 neostore.propertystore.db.arrays
-rw-r--r-- 1 neo4j nogroup 128 Jul 30 20:41 neostore.propertystore.db.strings
-rw-r--r-- 1 neo4j nogroup 25 Jul 30 20:41 neostore.relationshipgroupstore.db
-rw-r--r-- 1 neo4j nogroup 0 Jul 30 20:41 neostore.relationshipstore.db
ls -lh /var/lib/neo4j/data/graph.db/
total 168K
-rw-r--r-- 1 neo4j nogroup 11 Jul 30 20:41 active_tx_log
drwxr-xr-x 2 neo4j nogroup 4.0K Jul 30 20:41 index
-rw-r--r-- 1 neo4j nogroup 0 Jul 30 20:41 lock
-rw-r--r-- 1 neo4j nogroup 50K Jul 30 20:41 messages.log
-rw-r--r-- 1 neo4j nogroup 63 Jul 30 20:41 neostore
-rw-r--r-- 1 neo4j nogroup 9 Jul 30 20:41 neostore.id
-rw-r--r-- 1 neo4j nogroup 0 Jul 30 20:41 neostore.labeltokenstore.db
-rw-r--r-- 1 neo4j nogroup 9 Jul 30 20:41 neostore.labeltokenstore.db.id
-rw-r--r-- 1 neo4j nogroup 38 Jul 30 20:41 neostore.labeltokenstore.db.names
-rw-r--r-- 1 neo4j nogroup 9 Jul 30 20:41 neostore.labeltokenstore.db.names.id
-rw-r--r-- 1 neo4j nogroup 0 Jul 30 20:41 neostore.nodestore.db
-rw-r--r-- 1 neo4j nogroup 9 Jul 30 20:41 neostore.nodestore.db.id
-rw-r--r-- 1 neo4j nogroup 68 Jul 30 20:41 neostore.nodestore.db.labels
-rw-r--r-- 1 neo4j nogroup 9 Jul 30 20:41 neostore.nodestore.db.labels.id
-rw-r--r-- 1 neo4j nogroup 0 Jul 30 20:41 neostore.propertystore.db
-rw-r--r-- 1 neo4j nogroup 128 Jul 30 20:41 neostore.propertystore.db.arrays
-rw-r--r-- 1 neo4j nogroup 9 Jul 30 20:41 neostore.propertystore.db.arrays.id
-rw-r--r-- 1 neo4j nogroup 9 Jul 30 20:41 neostore.propertystore.db.id
-rw-r--r-- 1 neo4j nogroup 0 Jul 30 20:41 neostore.propertystore.db.index
-rw-r--r-- 1 neo4j nogroup 9 Jul 30 20:41 neostore.propertystore.db.index.id
-rw-r--r-- 1 neo4j nogroup 38 Jul 30 20:41 neostore.propertystore.db.index.keys
-rw-r--r-- 1 neo4j nogroup 9 Jul 30 20:41 neostore.propertystore.db.index.keys.id
-rw-r--r-- 1 neo4j nogroup 128 Jul 30 20:41 neostore.propertystore.db.strings
-rw-r--r-- 1 neo4j nogroup 9 Jul 30 20:41 neostore.propertystore.db.strings.id
-rw-r--r-- 1 neo4j nogroup 25 Jul 30 20:41 neostore.relationshipgroupstore.db
-rw-r--r-- 1 neo4j nogroup 9 Jul 30 20:41 neostore.relationshipgroupstore.db.id
-rw-r--r-- 1 neo4j nogroup 0 Jul 30 20:41 neostore.relationshipstore.db
-rw-r--r-- 1 neo4j nogroup 9 Jul 30 20:41 neostore.relationshipstore.db.id
-rw-r--r-- 1 neo4j nogroup 0 Jul 30 20:41 neostore.relationshiptypestore.db
-rw-r--r-- 1 neo4j nogroup 9 Jul 30 20:41 neostore.relationshiptypestore.db.id
-rw-r--r-- 1 neo4j nogroup 38 Jul 30 20:41 neostore.relationshiptypestore.db.names
-rw-r--r-- 1 neo4j nogroup 9 Jul 30 20:41 neostore.relationshiptypestore.db.names.id
-rw-r--r-- 1 neo4j nogroup 64 Jul 30 20:41 neostore.schemastore.db
-rw-r--r-- 1 neo4j nogroup 9 Jul 30 20:41 neostore.schemastore.db.id
-rw-r--r-- 1 neo4j nogroup 16 Jul 30 20:41 nioneo_logical.log.1
-rw-r--r-- 1 neo4j nogroup 4 Jul 30 20:41 nioneo_logical.log.active
drwxr-xr-x 3 neo4j nogroup 4.0K Jul 30 20:41 schema
-rw-r--r-- 1 neo4j nogroup 0 Jul 30 20:41 store_lock
-rw-r--r-- 1 neo4j nogroup 0 Jul 30 20:41 tm_tx_log.1
dpkg -L neo4j
/.
/etc
/etc/neo4j
/etc/neo4j/neo4j.properties
/etc/neo4j/neo4j-wrapper.conf
/etc/neo4j/neo4j-http-logging.xml
/etc/neo4j/neo4j-server.properties
/etc/neo4j/windows-wrapper-logging.properties
/etc/neo4j/custom-logback.xml
/etc/neo4j/README.txt
/etc/neo4j/logging.properties
/etc/init.d
/etc/init.d/neo4j-service
/var
/var/log
/var/log/neo4j
/var/lib
/var/lib/neo4j
/var/lib/neo4j/data
/var/lib/neo4j/data/README.txt
/var/lib/neo4j/LICENSES.txt
/var/lib/neo4j/CHANGES.txt
/var/lib/neo4j/UPGRADE.txt
/var/lib/neo4j/bin
/var/lib/neo4j/bin/neo4j
/var/lib/neo4j/bin/utils
/var/lib/neo4j/bin/neo4j-installer
/var/lib/neo4j/bin/lib
/var/lib/neo4j/bin/lib/README.txt
/var/lib/neo4j/bin/org.neo4j.server.plist
/var/lib/neo4j/bin/neo4j-shell
/var/lib/neo4j/bin/README.txt
/var/lib/neo4j/README.txt
/usr
/usr/bin
/usr/share
/usr/share/neo4j
/usr/share/neo4j/plugins
/usr/share/neo4j/plugins/README.txt
/usr/share/neo4j/system
/usr/share/neo4j/system/lib
/usr/share/neo4j/system/lib/logback-access-1.1.2.jar
.....
/usr/share/neo4j/system/lib/mimepull-1.6.jar
/usr/share/neo4j/system/README.txt
/usr/share/neo4j/lib
/usr/share/neo4j/lib/neo4j-shell-2.1.3.jar
/usr/share/neo4j/lib/neo4j-jmx-2.1.3.jar
....
/usr/share/neo4j/lib/neo4j-cypher-compiler-2.0-2.0.3.jar
/usr/share/neo4j/lib/README.txt
/usr/share/neo4j/lib/neo4j-graph-matching-2.1.3.jar
/usr/share/neo4j/lib/opencsv-2.0.jar
/usr/share/doc
/usr/share/doc/neo4j
/usr/share/doc/neo4j/changelog.gz
/usr/share/doc/neo4j/copyright
/usr/share/lintian
/usr/share/lintian/overrides
/usr/share/lintian/overrides/neo4j
/usr/share/man
/usr/share/man/man1
/usr/share/man/man1/neo4j-shell.1.gz
/var/lib/neo4j/data/log
/var/lib/neo4j/plugins
/var/lib/neo4j/system
/var/lib/neo4j/lib
/var/lib/neo4j/conf
/usr/bin/neo4j-shell
If you mean on disk, check here (for inspection purposes only of course): <neo4j_home>/data/graph.db.
Related
Our deployment model is that we create containers on the fly with docker-java-api, some of these containers use heavily rocksdb database. The files of the DB are on the host, like:
ls -lrt /mnt/data/rocksdb
-rw-r--r-- 1 root root 8374 Nov 28 15:32 fileA
-rw-r--r-- 1 root root 0 Nov 28 15:32 fileB
-rw-r--r-- 1 root root 37 Nov 28 15:32 ....
-rw-r--r-- 1 root root 16 Nov 28 15:32 fileC
-rw-r--r-- 1 root root 19646 Nov 28 15:32 ..
-rw-r--r-- 1 root root 22500 Nov 28 15:32 .... etc
/mnt/data/rocksdb gets mounted onto a container with app that uses the DB heavily.
What I notice is that after starting the container, ownership of the files changes to:
ls -lrnt /mnt/data/rocksdbdata/
total 84092
-rw-r--r-- 1 999 999 8374 Nov 28 15:32 fileA
-rw-r--r-- 1 999 999 0 Nov 28 15:32 LOCK
-rw-r--r-- 1 999 999 37 Nov 28 15:32 fileB
-rw-r--r-- 1 999 999 16 Nov 28 15:32 fileC
-rw-r--r-- 1 999 999 19646 Nov 28 15:32 ...
-rw-r--r-- 1 999 999 22500 Nov 28 15:32 .....etc
User with these UID:GID (999:999) is docker.
Can you tell me why is this happening?
It needs a long explanation. Long story short, docker is changing the mounted file permissions because of access with root permissions.
For more details, please look at this answer;
Docker changes owner of local files mounted as volume
My computer is running Windows 10 and Docker for Windows
I am using docker volume to code faster
the code is on the windows side. In the docker-compose.yaml I mount my workspace on the host tho the root of the apache server on the guest
volumes:
- ./:/var/www/html
When I create the file web\modules\custom\hello_world\hello_world.info.yml on the host that file replicates on the guest side but remains empty:
PS C:\Users\jeanp\CONSULTANT\dockertest> docker exec -it my_drupal9_project_nginx /bin/bash
/var/www/html$ ls -al web/modules/custom/hello_world/
total 8
drwxr-xr-x 2 root root 4096 Aug 3 16:46 .
drwxr-xr-x 3 root root 4096 Aug 3 16:46 ..
-rwxr-xr-x 1 root root 0 Aug 3 16:46 hello_world.info.yml
(hello_world.info.yml has 0 bytes length and can be edited only by root)
On the guest side, when I try to edit hello_world.info.yml I cannot save it because it is marked as read-only
web/modules/custom/hello_world/hello_world.info.yml [Readonly] 0/0 100%
On the guest side I asked who am I the answer is wodby:
/var/www/html$ whoami
wodby
the other files on in the image on the guest belongs to wodby
/var/www/html$ ls -al web
total 84
drwxr-xr-x 7 wodby wodby 4096 Jul 22 02:17 .
drwxr-xr-x 4 wodby wodby 4096 Jul 31 12:04 ..
-rw-r--r-- 1 wodby wodby 1025 Jul 22 02:17 .csslintrc
-rw-r--r-- 1 wodby wodby 151 Jul 22 02:17 .eslintignore
-rw-r--r-- 1 wodby wodby 41 Jul 22 02:17 .eslintrc.json
-rw-r--r-- 1 wodby wodby 2314 Jul 22 02:17 .ht.router.php
-rw-r--r-- 1 wodby wodby 7572 Jul 22 02:17 .htaccess
-rw-r--r-- 1 wodby wodby 94 Jul 22 02:17 INSTALL.txt
-rw-r--r-- 1 wodby wodby 3205 Jul 22 02:17 README.md
-rw-r--r-- 1 wodby wodby 315 Jul 22 02:17 autoload.php
drwxr-xr-x 12 wodby wodby 4096 Jul 20 21:42 core
-rw-r--r-- 1 wodby wodby 1507 Jul 22 02:17 example.gitignore
-rw-r--r-- 1 wodby wodby 549 Jul 22 02:17 index.php
drwxr-xr-x 3 wodby wodby 4096 Aug 3 16:46 modules
drwxr-xr-x 2 wodby wodby 4096 Jul 22 02:17 profiles
-rw-r--r-- 1 wodby wodby 1586 Jul 22 02:17 robots.txt
drwxr-xr-x 3 wodby wodby 4096 Jul 22 02:17 sites
drwxr-xr-x 2 wodby wodby 4096 Jul 22 02:17 themes
-rw-r--r-- 1 wodby wodby 804 Jul 22 02:17 update.php
-rw-r--r-- 1 wodby wodby 4016 Jul 22 02:17 web.config
My question is the following:
how to make that on the guest the files created through synchronisation from the host belongs to wodby and not root ?
Sounds like you could benefit from setting up the folder and permissions via the Dockerfile prior to mounting the files in:
https://github.com/moby/moby/issues/2259#issuecomment-48286811
Else this issue may be able to help you out, detailing a volumes-from pattern
What is the (best) way to manage permissions for Docker shared volumes?
Sorry I post my question here as I permanently get an error on the sphinxsearch forum where it belongs to.
I have set min_prefix_len = 3.
According to http://sphinxsearch.com/docs/current/conf-min-prefix-len.html I expect a match for
val*
but I do not even get a match for
vale*
however I get all matches for
valeg*
valegr*
valegro*
What is it that I do not understand?
I'm sorry, now it works like it should. Possible explanation is an error in the index. While exploring manticore as an alternative to sphinx, I reindexed and by chance noticed that rotation did not occur although the indexer said so:
rotating indices: successfully sent SIGHUP to searchd (pid=8).
But looking at the disk proved that this was not the case:
# ls -latrh /d/data/sphinx/*sm_en*
-rw-r--r-- 1 root root 0 Jul 29 04:43 /d/data/sphinx/lng_sm_en.spm
-rw-r--r-- 1 root root 31K Jul 29 04:43 /d/data/sphinx/lng_sm_en.spa
-rw-r--r-- 1 root root 0 Jul 29 04:43 /d/data/sphinx/lng_sm_en.spk
-rw-r--r-- 1 root root 607K Jul 29 04:43 /d/data/sphinx/lng_sm_en.spi
-rw-r--r-- 1 root root 5.7M Jul 29 04:43 /d/data/sphinx/lng_sm_en.spd
-rw-r--r-- 1 root root 11M Jul 29 04:43 /d/data/sphinx/lng_sm_en.spp
-rw-r--r-- 1 root root 30M Jul 29 04:43 /d/data/sphinx/lng_sm_en.sps
-rw-r--r-- 1 root root 823 Jul 29 04:43 /d/data/sphinx/lng_sm_en.sph
-rw-r--r-- 1 root root 38K Jul 29 04:43 /d/data/sphinx/lng_sm_en.spe
-rw------- 1 root root 0 Jul 29 04:43 /d/data/sphinx/lng_sm_en.spl
-rw-r--r-- 1 root root 0 Jul 31 00:36 /d/data/sphinx/lng_sm_en.new.spm
-rw-r--r-- 1 root root 31K Jul 31 00:36 /d/data/sphinx/lng_sm_en.new.spa
-rw-r--r-- 1 root root 0 Jul 31 00:36 /d/data/sphinx/lng_sm_en.new.spk
-rw-r--r-- 1 root root 11M Jul 31 00:36 /d/data/sphinx/lng_sm_en.new.spp
-rw-r--r-- 1 root root 607K Jul 31 00:36 /d/data/sphinx/lng_sm_en.new.spi
-rw-r--r-- 1 root root 5.7M Jul 31 00:36 /d/data/sphinx/lng_sm_en.new.spd
-rw-r--r-- 1 root root 823 Jul 31 00:36 /d/data/sphinx/lng_sm_en.new.sph
-rw-r--r-- 1 root root 30M Jul 31 00:36 /d/data/sphinx/lng_sm_en.new.sps
-rw-r--r-- 1 root root 38K Jul 31 00:36 /d/data/sphinx/lng_sm_en.new.spe
-rw------- 1 root root 0 Jul 31 00:36 /d/data/sphinx/lng_sm_en.new.spl
So I deleted these files and indexed again. Probably this fixed the issue, as rotating works again as well.
As the filedates show, this problem must have been lingering for 2 weeks. Now the dates are correct, too.
As stated in this document, docker container's runtime matrix should be available at /sys/fs/cgroup/memory/lxc/<longid>/.
However, if I am using boot2docker image, I can only find a folder named docker under /sys/fs/cgroup/memory/ with some matrices.
$ ls /sys/fs/cgroup/memory/ -l
total 0
-rw-r--r-- 1 root root 0 Mar 25 08:39 cgroup.clone_children
--w--w--w- 1 root root 0 Mar 25 08:39 cgroup.event_control
-rw-r--r-- 1 root root 0 Mar 25 08:39 cgroup.procs
-r--r--r-- 1 root root 0 Mar 25 08:39 cgroup.sane_behavior
drwxr-xr-x 2 root root 0 Mar 25 07:41 docker/
-rw-r--r-- 1 root root 0 Mar 25 08:39 memory.failcnt
--w------- 1 root root 0 Mar 25 08:39 memory.force_empty
-rw-r--r-- 1 root root 0 Mar 25 08:39 memory.kmem.failcnt
-rw-r--r-- 1 root root 0 Mar 25 08:39 memory.kmem.limit_in_bytes
-rw-r--r-- 1 root root 0 Mar 25 08:39 memory.kmem.max_usage_in_bytes
-r--r--r-- 1 root root 0 Mar 25 08:39 memory.kmem.slabinfo
-rw-r--r-- 1 root root 0 Mar 25 08:39 memory.kmem.tcp.failcnt
-rw-r--r-- 1 root root 0 Mar 25 08:39 memory.kmem.tcp.limit_in_bytes
-rw-r--r-- 1 root root 0 Mar 25 08:39 memory.kmem.tcp.max_usage_in_bytes
-r--r--r-- 1 root root 0 Mar 25 08:39 memory.kmem.tcp.usage_in_bytes
-r--r--r-- 1 root root 0 Mar 25 08:39 memory.kmem.usage_in_bytes
-rw-r--r-- 1 root root 0 Mar 25 04:00 memory.limit_in_bytes
-rw-r--r-- 1 root root 0 Mar 25 08:39 memory.max_usage_in_bytes
-rw-r--r-- 1 root root 0 Mar 25 08:39 memory.memsw.failcnt
-rw-r--r-- 1 root root 0 Mar 25 04:00 memory.memsw.limit_in_bytes
-rw-r--r-- 1 root root 0 Mar 25 08:39 memory.memsw.max_usage_in_bytes
-r--r--r-- 1 root root 0 Mar 25 08:39 memory.memsw.usage_in_bytes
-rw-r--r-- 1 root root 0 Mar 25 08:39 memory.move_charge_at_immigrate
-rw-r--r-- 1 root root 0 Mar 25 08:39 memory.oom_control
---------- 1 root root 0 Mar 25 08:39 memory.pressure_level
-rw-r--r-- 1 root root 0 Mar 25 04:00 memory.soft_limit_in_bytes
-r--r--r-- 1 root root 0 Mar 25 08:39 memory.stat
-rw-r--r-- 1 root root 0 Mar 25 08:39 memory.swappiness
-r--r--r-- 1 root root 0 Mar 25 08:39 memory.usage_in_bytes
-rw-r--r-- 1 root root 0 Mar 25 08:39 memory.use_hierarchy
-rw-r--r-- 1 root root 0 Mar 25 08:39 notify_on_release
-rw-r--r-- 1 root root 0 Mar 25 08:39 release_agent
-rw-r--r-- 1 root root 0 Mar 25 08:39 tasks
How can I get back the missing LXC matrices in boot2docker image?
I've seen a lot of Flex Patches for Cydia, but every time I try to process Cydia it just takes for ever and then crashes Flex. I'm on the latest Flex 2 version and it's not a cracked version.
So I thought to use Class Dump, but how to use Class Dump on Cydia?
Copy the Cydia executable from your phone to your Mac:
scp root#iphone-ip-address:/Applications/Cydia.app/MobileCydia .
Then, run class-dump on the executable file:
class-dump MobileCydia -H .
I ran it and got these generated headers:
-rw-r--r-- 1 username staff 2341 Aug 15 15:50 Database.h
-rw-r--r-- 1 username staff 452 Aug 15 15:50 CyteWebViewTableViewCell.h
-rw-r--r-- 1 username staff 2634 Aug 15 15:50 CyteWebViewDelegate-Protocol.h
-rw-r--r-- 1 username staff 6046 Aug 15 15:50 CyteWebViewController.h
-rw-r--r-- 1 username staff 1916 Aug 15 15:50 CyteWebView.h
-rw-r--r-- 1 username staff 686 Aug 15 15:50 CyteViewController.h
-rw-r--r-- 1 username staff 226 Aug 15 15:50 CyteTableViewCellDelegate-Protocol.h
-rw-r--r-- 1 username staff 362 Aug 15 15:50 CyteTableViewCellContentView.h
-rw-r--r-- 1 username staff 444 Aug 15 15:50 CyteTableViewCell.h
-rw-r--r-- 1 username staff 605 Aug 15 15:50 CyteTabBarController.h
-rw-r--r-- 1 username staff 850 Aug 15 15:50 CydiaWebViewController.h
-rw-r--r-- 1 username staff 360 Aug 15 15:50 CydiaURLProtocol.h
-rw-r--r-- 1 username staff 998 Aug 15 15:50 CydiaTabBarController.h
-rw-r--r-- 1 username staff 548 Aug 15 15:50 CydiaRelation.h
-rw-r--r-- 1 username staff 1134 Aug 15 15:50 CydiaProgressEvent.h
-rw-r--r-- 1 username staff 1079 Aug 15 15:50 CydiaProgressData.h
-rw-r--r-- 1 username staff 520 Aug 15 15:50 CydiaOperation.h
-rw-r--r-- 1 username staff 2708 Aug 15 15:50 CydiaObject.h
-rw-r--r-- 1 username staff 260 Aug 15 15:50 CydiaLoadingViewController.h
-rw-r--r-- 1 username staff 433 Aug 15 15:50 CydiaLoadingView.h
-rw-r--r-- 1 username staff 1024 Aug 15 15:50 CydiaDelegate-Protocol.h
-rw-r--r-- 1 username staff 508 Aug 15 15:50 CydiaClause.h
-rw-r--r-- 1 username staff 3578 Aug 15 15:50 Cydia.h
-rw-r--r-- 1 username staff 341 Aug 15 15:50 ConfirmationControllerDelegate-Protocol.h
-rw-r--r-- 1 username staff 936 Aug 15 15:50 ConfirmationController.h
-rw-r--r-- 1 username staff 744 Aug 15 15:50 ChangesController.h
-rw-r--r-- 1 username staff 454 Aug 15 15:50 CYWebPolicyDecisionMediator.h
-rw-r--r-- 1 username staff 315 Aug 15 15:50 CYURLCache.h
-rw-r--r-- 1 username staff 1169 Aug 15 15:50 CYPackageController.h
-rw-r--r-- 1 username staff 14392 Aug 15 15:50 CDStructures.h
-rw-r--r-- 1 username staff 317 Aug 15 15:50 AppCacheController.h
drwxr-xr-x 113 username staff 3842 Aug 15 15:50 .
-rw-r--r-- 1 username staff 237 Aug 15 15:50 (null)-NSCoder.h
-rw-r--r-- 1 username staff 325 Aug 15 15:50 (null)-MenesYieldToSelector.h
-rw-r--r-- 1 username staff 326 Aug 15 15:50 (null)-MenesRadixSortWithSelector.h
-rw-r--r-- 1 username staff 252 Aug 15 15:50 (null)-MenesInvocationWithSelector.h
-rw-r--r-- 1 username staff 215 Aug 15 15:50 (null)-CyteDispatchEvent.h
-rw-r--r-- 1 username staff 302 Aug 15 15:50 (null)-Cyte.h
-rw-r--r-- 1 username staff 201 Aug 15 15:50 (null)-CydiaSecure.h
-rw-r--r-- 1 username staff 224 Aug 15 15:50 (null)-CydiaScript.h
-rw-r--r-- 1 username staff 242 Aug 15 15:50 (null)-Cydia.h
Class dump did its work in no time at all (less than a second).
If class-dump fails, you probably have an outdated version of class dump. The one I used was from the newest installation of iOSOpenDev.