Nokogiri installation fails -libxml2 is missing - ruby-on-rails

I always worked my way around Nokogiri installation issues by following the documentation in the "Installing Nokogiri" tutorial.
But this time, even after installing all the dependencies, Nokogiri hasn't been installed. I get the following error:
libxml2 is missing. please visit <http://nokogiri.org/tutorials/installing_nokogiri.html>
I tried installing it by specifying the libxml2 and libxslt directories:
sudo gem install nokogiri -- --with-xml2-include=/usr/include/libxml2 --with-xml2-lib=/usr/lib --with-xslt-dir=/usr/
but it returned the same error.
I followed all the other related Stack Overflow articles and none helped. Does anyone have a solution?

You may actually need to install both of these packages
sudo apt-get install libxslt-dev libxml2-dev

First, install the dependencies:
sudo apt-get install libxslt-dev libxml2-dev
If you still receive the error, you may be missing a compiler toolchain:
sudo apt-get install build-essential
You'll get the "libxml2 is missing" error if you're missing a build toolchain (at least I ran into this issue on Debian Lenny).
The Nokogiri build test-compiles a libxml2 header file to verify that it is present, however, it doesn't differentiate between "libxml2 is missing" and "a compiler to test libxml2 is missing".

In Mac OS X (Mavericks), installing the libraries with brew and setting NOKOGIRI_USE_SYSTEM_LIBRARIES=1 before installing the gem did the trick for me.
Summarising:
If previously installed, uninstall the gem:
gem uninstall nokogiri
Use Homebrew to install libxml2, libxslt and libiconv:
brew install libxml2 libxslt libiconv
Install the gem specifying the paths to the libraries to be linked against:
NOKOGIRI_USE_SYSTEM_LIBRARIES=1 gem install nokogiri -- --use-system-libraries --with-iconv-dir="$(brew --prefix libiconv)" --with-xml2-config="$(brew --prefix libxml2)/bin/xml2-config" --with-xslt-config="$(brew --prefix libxslt)/bin/xslt-config"

I just had the same issue on Fedora 13. After a frustrating and unsuccessful search to make
gem install nokogiri
work for me, I was able to install it and get around the libxml2 error via yum.
Simply install the gem via yum instead of the gem command:
su
yum search rubygem-nokogiri #this find the proper package name
yum install rubygem-nokogiri.i686
This helped me find the right answer for Fedora and, as I am using RVM for Ruby package management,
yum install rubygem-nokogiri
will pull in all the Ruby gems and dependencies into the system, not into my RVM environment, and in my experience that leads to a very frustrating and humbling experience.
So, taking your find of the Nokogiri yum gem you can use:
yum provides rubygem-nokogiri
and get a list of the dependencies for rubygem-Nokogiri which showed me the libraries that were missing. After that I ran:
yum install libxml2-devel libxslt libxslt-devel
Now Nokogiri compiles in Fedora and Nokogiri installs. D'oh!, we need the headers to compile Nokogiri from the devel libraries.

In Mac OS X (Mavericks) if none of these solutions work, try:
ARCHFLAGS="-arch x86_64" gem install nokogiri
or
ARCHFLAGS="-arch i386" gem install nokogiri
depending on your system's architecture.

You usually need development files for building gems. Try:
sudo apt-get install libxslt-dev libxml2-dev
(I just saw that Eric suggested the same in a comment.)

I was able to get this installed with Chocolatey, Windows 8.1 x64, and DevKit x64.
cinst libxml2
cinst libxslt
cinst libiconv
gem install nokogiri --
--with-xml2-include=C:\Chocolatey\lib\libxml2.2.7.8.7\build\native\include
--with-xml2-lib=C:\Chocolatey\lib\libxml2.redist.2.7.8.7\build\native\bin\v110\x64\Release\dynamic\cdecl
--with-iconv-include=C:\Chocolatey\lib\libiconv.1.14.0.11\build\native\include
--with-iconv-lib=C:\Chocolatey\lib\libiconv.redist.1.14.0.11\build\native\bin\v110\x64\Release\dynamic\cdecl
--with-xslt-include=C:\Chocolatey\lib\libxslt.1.1.28.0\build\native\include
--with-xslt-lib=C:\Chocolatey\lib\libxslt.redist.1.1.28.0\build\native\bin\v110\x64\Release\dynamic
You'll have to verify the version number in the paths are correct.
You may possibly need to add Microsoft's NuGet repository:
-Source "https://go.microsoft.com/fwlink/?LinkID=230477"

It will be:
sudo yum install -y libxml2 libxml2-devel
on RHEL servers.

At macOS none of above/below had really worked for me until I explicitly provided XCode libxml2 path to --with-xml2-include.
gem install nokogiri -- --with-xml2-include=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/libxml2 --use-system-libraries

I was able to install Nokogiri 1.6.5 on Fedora 20 by doing:
export NOKOGIRI_USE_SYSTEM_LIBRARIES=true
Then running:
gem install nokogiri

For anyone else experiencing this issue, I solved it by running this command within the project directory
gem install nokogiri -- --use-system-libraries
Update: I ran into this again and tried just updating the gem which worked for me...
gem update nokogiri

Have you tried installing libxml2? Not from rubygems, but via the standard install process for your operating system. On Ubuntu/Debian for example:
sudo apt-get install libxml2
On any recent version of OS X it should already be installed.

For OSX users, if you've had success installing Nokogiri before, yet are getting errors installing it on, say, using a new version of Ruby that you've added and that error that includes a message like:
The compiler failed to generate an executable file. (RuntimeError)
You have to install development tools first.
This could be indicative of a XCode upgrade having happened via the App Store, either manually or automatically, and you not having opened it since that time.
If so, you should be able to open XCode, agree to the new license, and then install Nokogiri successfully.

On Mac OS X Yosemite my mistake was that I tried to use sudo gem install when it's a rule of thumb to not use superuser privileges when installing gems.
In my case it tried to modify the system installation of Ruby, and that's not a good idea. I installed rbenv, installed Ruby 2.2.2 thru it and set it as global, which is a term from rbenv's documentation. After that Nokogiri could install itself with a simple
gem install nokogiri
No hacks or workarounds were necessary, just a properly set environment; Nokogiri does the rest perfectly.

Was able to install vagrant-awe by following the above post but using the command as follow:
NOKOGIRI_USE_SYSTEM_LIBRARIES=1 vagrant plugin install vagrant-aws

For Windows x64:
gem inst nokogiri --pre --platform ruby
For more information check this thread: https://github.com/sparklemotion/nokogiri/issues/864

I was able to install Nokogiri by running the following packages:
$ dnf group install "C Development Tools and Libraries"
$ dnf install ruby-devel libxml2-devel patch

=== TLDR ===
As the instructions state, build Ruby with the latest clang compiler, or at least the same version that Rubygems will use to compile Nokogiri's native extensions libxml and libxsl.
If using RVM, building from source with the --with-ggc=clang flag was what did it for me:
rvm install 2.2 --with-gcc=clang
Replace 2.2 with whatever version you want. --with-gcc=clang ensures RVM builds from source and uses clang to do so; otherwise RVM may a pre-built binary Ruby, which is what tripped me up.
Then, install Nokogiri as normal using Bundler or Rubygems.
=== IN DEPTH ===
I struggled with this for a while. gem install nokogiri gave me:
checking for xmlParseDoc() in libxml/parser.h... no
checking for xmlParseDoc() in -lxml2... no
checking for xmlParseDoc() in -llibxml2... no
Digging into mkmf.log I saw:
conftest.c:15:27: error: too few arguments to function call, single argument 'cur' was not specified
int t(void) { xmlParseDoc(); return 0; }
Nokogiri supplies its own libxml and libxsl (as of 1.6.4). The signature defined in Nokogiri's local copy of parser.h (found under the gem install directory) is:
xmlParseDoc (const xmlChar *cur);
So I was at a loss as to how the method call in the hermetically sealed conftest.c file usage couldn't match up with the header file for parser.h.
When I realized I had probably installed a binary Ruby I removed and reinstalled using --with-gcc=clang (to force compilation and use clang) and the problem was solved:
rvm uninstall 2.2
rvm install 2.2 --with-gcc=clang
gem install nokogiri
I'm not exactly sure why that works as the system libxml header /usr/include/libxml2/libxml/parser.h has the same signature as Nokogiri's local copy.
It's weird, but it worked. Just make sure you compile a Ruby with clang.

gem install nokogiri -- --with-xml2-include=/usr/local/Cellar/libxml2/2.7.8/include/libxml2 --with-xml2-lib=/usr/local/Cellar/libxml2/2.7.8/lib --with-xslt-dir=/usr/local/Cellar/libxslt/1.1.26 --with-iconv-include=/usr/local/Cellar/libiconv/1.14/include --with-iconv-lib=/usr/local/Cellar/libiconv/1.14/lib
Change your version with it.

Related

How to create Migration File in rails? [duplicate]

I have done all kinds of research and tried many different things. I know this question has been answered many times, but none of the suggested solutions are working for me.
After upgrading to Lion I am getting segmentation faults in Ruby. I'm fairly confident it's Nokogiri. So I installed libxml2 via Homebrew. I ran brew link libxml2. Then I reinstalled Nokogiri using that version of the library.
For proof:
$ nokogiri -v
# Nokogiri (1.5.0)
---
warnings: []
nokogiri: 1.5.0
ruby:
version: 1.9.2
platform: x86_64-darwin11.0.0
description: ruby 1.9.2p290 (2011-07-09 revision 32553) [x86_64-darwin11.0.0]
engine: ruby
libxml:
binding: extension
compiled: 2.7.8
loaded: 2.7.8
I've already included Nokogiri at the top of my gemfile and I've also required it in my environment file. I have no idea why I am still getting that warning.
Any suggestions or ideas to make sure it's loading the right version libxml2?
If you installed Nokogiri with gem install nokogiri, you can resolve this warning by running gem pristine nokogiri to recompile the gem's C extension.
If you installed Nokogiri with bundle install, you can resolve this warning by running bundle exec gem pristine nokogiri to recompile the C extension of the gem wherever Bundler installed it.
To fix this if you're using homebrew and bundler, add gem 'nokogiri' to the top of your Gemfile, then run these commands:
gem uninstall nokogiri libxml-ruby
brew update
brew uninstall libxml2
brew install libxml2 --with-xml2-config
brew install libxslt
bundle config build.nokogiri --with-xml2-include=/usr/local/Cellar/libxml2/2.9.1/include/libxml2 --with-xml2-lib=/usr/local/Cellar/libxml2/2.9.1/lib --with-xslt-dir=/usr/local/Cellar/libxslt/1.1.26/
bundle install
If you don't use bundler, run these commands instead:
gem uninstall nokogiri libxml-ruby
brew update
brew uninstall libxml2
brew install libxml2 --with-xml2-config
brew install libxslt
gem install nokogiri -- --with-xml2-include=/usr/local/Cellar/libxml2/2.9.1/include/libxml2 --with-xml2-lib=/usr/local/Cellar/libxml2/2.9.1/lib --with-xslt-dir=/usr/local/Cellar/libxslt/1.1.26/
In your app, you should require nokogiri first, to force the app to load the dynamic libxml2 library instead of the older system version of libxml2 loaded by gems that failed to specify which library to load.
I just spent the better part of the morning working through this warning. This fix is for people using Mac OS Lion. The fix above using
bundle config build.nokogiri --with-xml2-include=/opt/local/include/libxml2 --with-xml2-lib=/opt/local/lib --with-xslt-dir=/opt/local
is for Snow Leopard with libxml2 installed via MacPorts.
With Lion, libxml2 is loaded as part of the bootstrap process. Regardless of which libxml2 Nokogiri is pointing to, the Lion system default library for libxml2 will be used at runtime. Lion uses libxml2.2.7.3 found in /usr (not /usr/local).
As mentioned many other places, one can just ignore the warning. If, like me, the warning drives you crazy, you can do this:
bundle config build.nokogiri --with-xml2-dir=/usr --with-xslt-dir=/opt/local --with-iconv-dir=/opt/local
Interestingly, if you type nokogiri -v at the command line you will get the opposite warning:
WARNING: Nokogiri was built against LibXML version 2.7.3, but has dynamically loaded 2.7.8
This suggests there is more to how libxml2 is being loaded, with Ruby and Rails using the system loaded libxml2 and the command line using libxml2 from the environment path. Anyway, this silences the error for me.
I’ll say it again – this is only for Lion. The previous fix will work for Snow Leopard.
This is the end of the answer. Stop reading here.
OK, you didn’t stop reading... well...
NOT RECOMMENDED!!!!!!
You have been warned. You can verify that Mac OSX is loading the libxml2 library in its bootstrap by disabling libxml2 found in /usr/lib. Do something like copying all versions of libxml2*.dylib to libxml2*.dylib.old (on my machine this was libxml2.2.7.3, libxml2.2 and libxml2).
After you have done this, running Nokogiri will not produce any errors. That is because it can’t find the loaded libxml2 and will now follow the environment path, eventually finding libxml2.2.7.8 in /opt/local.
BUT you won’t be able to copy the old libxml files back. This is because the OS needs the libxml2 that was loaded in the bootstrap.
Powering off and powering on again will brick your machine. The login screen will hang and hang and hang. Power off and power on again in single-user mode (hold Command-S while rebooting). You can watch the bootstrap occur. Low and behold, it throws an error that it can’t load libxml2 and then stops working.
Power off and power on again. This time boot into recovery mode (either hold Command-R or hold Option and then select the recovery disk). In recovery mode open the terminal (utilities/terminal). Mount /usr/lib on your HD (try /Volumes/Macintosh\ HD/usr/lib) and copy the libxml2 files back. Reboot and all will be fine.
None of this worked for me.
I had libxml2 installed at a later version (2.7.8) with brew. This caused nokogiri to compile against it and the later problems. Solution, remove it, then build, then install if desired.
Here's what worked:
brew uninstall libxml2 (if previously installed)
gem uninstall nokogiri
gem install nokogiri
brew install libxml2 (optional)
The solution (for me) after updating to Mountain Lion was much simplier:
gem uninstall nokogiri
# (and ignore the warnings about dependencies)
gem install nokogiri
As per the comment from patrickmcgraw above, simply putting nokogiri as the first entry in my Gemfile worked for me. I'm putting it as a separate answer because the original comment has been buried.
source 'http://rubygems.org'
gem 'nokogiri'
gem 'rails', '3.0.20'
etc...
Bundler has options to set the default build locations. So for instance, with libxml2 installed via macports:
$ bundle config build.nokogiri --with-xml2-include=/opt/local/include/libxml2 --with-xml2-lib=/opt/local/lib --with-xslt-dir=/opt/local
After doing this and bundle install, the warning went away.
There's also some helpful examples for setting build options on the nokogiri wiki.
Looks like you have updated your system libraries after installing the gem, so you have to update Nokogiri. To use the current lib version:
gem install nokogiri -- --use-system-libraries
I had similar problem and just solved this way:
In my case, I have RVM installed, and I had #global and #project gem sets.
Both of them had nokogiri installed and one of them had built with with different libxml.
Rebuilding both of them (I have reason to do this) solved the problem.
Hope this helps..
gem uninstall nokogiri
bundle #install nokogiri again
If that fails with "libxml2 is missing." and you see gems/nokogiri-1.5.0/ext/nokogiri/mkmf.log trying to use "/usr/bin/gcc-4.2 ...", then you're missing /usr/bin/gcc-4.2
Solution:
sudo ln -s /usr/bin/gcc /usr/bin/gcc-4.2
Before:
$ ll /usr/bin/gcc*
lrwxr-xr-x 1 root wheel 12 Jan 15 00:16 /usr/bin/gcc -> llvm-gcc-4.2
After:
$ ll /usr/bin/gcc*
lrwxr-xr-x 1 root wheel 12 Jan 15 00:16 /usr/bin/gcc -> llvm-gcc-4.2
lrwxr-xr-x 1 root wheel 12 Jan 15 21:07 /usr/bin/gcc-4.2 -> /usr/bin/gcc
If you're really missing libxml2 libxslt, then
brew update
brew install libxml2 libxslt
brew link libxml2 libxslt
bundle config build.nokogiri --with-xml2-include=/usr/local/Cellar/libxml2/2.8.0/include/libxml2/ --with-xml2-lib=/usr/local/Cellar/libxml2/2.8.0/lib/ --with-xslt-dir=/usr/local/Cellar/libxslt/1.1.26/
bundle
FYI: I'm running Mountain Lion with brew, and bundler.
gem install libxml-ruby helps me
I actually had 2 versions of libxml installed, one from source, one from an RPM.
The following is my complete solution
I uninstalled source (from the source directory)
sudo make uninstall
Remove bundles
rm -rf ~/.bundle ~/.bundler
Updated LD (might have to do this as root, not sudo)
sudo ldconfig
Then reinstalled the bundle
bundle install
Just ran into this myself (OS X Lion 10.7.5). My exact message was: Nokogiri was built against LibXML version 2.8.0, but has dynamically loaded 2.7.3
I tried a few suggestions mentioned here, none worked, but this did:
gem install nokogiri -- --with-xml2-dir=/usr --with-xslt-dir=/opt/local --with-iconv-dir=/opt/local
The explanation is: "This happens because the Lion system default libxml2 (loaded at bootstrap) is used, regardless of which libxml2 Nokogiri was built against."
Credits to: https://coderwall.com/p/o5ewia
OS : Maverick 10.9.3
Ruby 1.9.3
WARNING: Nokogiri was built against LibXML version 2.9.1, but has dynamically loaded 2.9.0
My solution:
gem uninstall nokogiri
brew update
cd /usr/local
brew versions libxml2
git checkout 5dd45d7 /usr/local/Library/Formula/libxml2.rb # libxml version 2.9.0
brew install libxml2
bundle install or gem install nokogiri -v "1.5.11"
Hope this help
If you have this message and your nokogiri is out-of-date with the version available from the gem source, simply run bundle update nokogiri to get the new code and recompile. Your error should go away.
OS: Catalina
Warning: warning nokogiri was built against libxml version 2.9.10 but has dynamically loaded 2.9.4
I followed Michiel de Mare steps, but brew install libxml2 --with-xml2-config failed with invalid option error. So I installed libxml2 and libxslt and took note of the output from both commands.
brew install libxml2
==> Downloading https://homebrew.bintray.com/bottles/libxml2-2.9.10_2.catalina.bottle.tar.gz
Already downloaded: /Users/alberto/Library/Caches/Homebrew/downloads/9ddf5cb90fd16a7eb531e37bb748fd392f30214d9fe1568b2b70d28cc368c8f7--libxml2-2.9.10_2.catalina.bottle.tar.gz
==> Pouring libxml2-2.9.10_2.catalina.bottle.tar.gz
==> Caveats
libxml2 is keg-only, which means it was not symlinked into /usr/local,
because macOS already provides this software and installing another version in
parallel can cause all kinds of trouble.
If you need to have libxml2 first in your PATH run:
echo 'export PATH="/usr/local/opt/libxml2/bin:$PATH"' >> ~/.zshrc
For compilers to find libxml2 you may need to set:
export LDFLAGS="-L/usr/local/opt/libxml2/lib"
export CPPFLAGS="-I/usr/local/opt/libxml2/include"
For pkg-config to find libxml2 you may need to set:
export PKG_CONFIG_PATH="/usr/local/opt/libxml2/lib/pkgconfig"
==> Summary
🍺 /usr/local/Cellar/libxml2/2.9.10_2: 280 files, 10.6MB
brew install libxslt
==> Downloading https://homebrew.bintray.com/bottles/libxslt-1.1.34.catalina.bottle.tar.gz
==> Downloading from https://d29vzk4ow07wi7.cloudfront.net/cbadecf3186f45754220dff4cbdfbb576882a211d615b52249a4c9d8ba4d7c3a?response-content-disposition=attachment%3Bfil
######################################################################## 100.0%
==> Pouring libxslt-1.1.34.catalina.bottle.tar.gz
==> Caveats
To allow the nokogiri gem to link against this libxslt run:
gem install nokogiri -- --with-xslt-dir=/usr/local/opt/libxslt
libxslt is keg-only, which means it was not symlinked into /usr/local,
because macOS already provides this software and installing another version in
parallel can cause all kinds of trouble.
If you need to have libxslt first in your PATH run:
echo 'export PATH="/usr/local/opt/libxslt/bin:$PATH"' >> ~/.zshrc
For compilers to find libxslt you may need to set:
export LDFLAGS="-L/usr/local/opt/libxslt/lib"
export CPPFLAGS="-I/usr/local/opt/libxslt/include"
For pkg-config to find libxslt you may need to set:
export PKG_CONFIG_PATH="/usr/local/opt/libxslt/lib/pkgconfig"
==> Summary
🍺 /usr/local/Cellar/libxslt/1.1.34: 136 files, 2.8MB
And I used those directories when configuring bundle for nokogiri
bundle config build.nokogiri --with-xml2-include=/usr/local/opt/libxml2/include --with-xml2-lib=/usr/local/opt/libxml2/lib --with-xslt-dir=/usr/local/opt/libxslt
To summarize I executed these steps
gem uninstall nokogiri libxml-ruby
brew update
brew uninstall libxml2
brew install libxml2
brew install libxslt
bundle config build.nokogiri --with-xml2-include=/usr/local/opt/libxml2/include --with-xml2-lib=/usr/local/opt/libxml2/lib --with-xslt-dir=/usr/local/opt/libxslt
bundle install

Unable to install gem - Failed to build gem native extension - cannot load such file -- mkmf (LoadError)

Ruby 1.9.3
The part of Gemfile
#...............
gem "pony"
gem "bcrypt-ruby", :require => "bcrypt"
gem "nokogiri"
#..................
When I'm trying to install gems, I get an error
alex#ubuntu:~/$ bundle
Fetching gem metadata from http://rubygems.org/.........
Fetching gem metadata from http://rubygems.org/..
Enter your password to install the bundled RubyGems to your system:
#####............................................................
Installing bcrypt-ruby (3.0.1) with native extensions
Gem::Installer::ExtensionBuildError: ERROR: Failed to build gem native extension.
/usr/bin/ruby1.9.1 extconf.rb
/usr/lib/ruby/1.9.1/rubygems/custom_require.rb:36:in `require': cannot load such file -- mkmf (LoadError)
from /usr/lib/ruby/1.9.1/rubygems/custom_require.rb:36:in `require'
from extconf.rb:36:in `<main>'
Gem files will remain installed in /home/alex/.bundler/tmp/5526/gems/bcrypt-ruby-3.0.1 for inspection.
Results logged to /home/alex/.bundler/tmp/5526/gems/bcrypt-ruby-3.0.1/ext/mri/gem_make.out
An error occurred while installing bcrypt-ruby (3.0.1), and Bundler cannot continue.
Make sure that `gem install bcrypt-ruby -v '3.0.1'` succeeds before bundling.
Then I'm doing this
sudo gem install bcrypt-ruby -v '3.0.1'
Building native extensions. This could take a while...
ERROR: Error installing bcrypt-ruby:
ERROR: Failed to build gem native extension.
/usr/bin/ruby1.9.1 extconf.rb
/usr/lib/ruby/1.9.1/rubygems/custom_require.rb:36:in `require': cannot load such file -- mkmf (LoadError)
from /usr/lib/ruby/1.9.1/rubygems/custom_require.rb:36:in `require'
from extconf.rb:36:in `<main>'
Gem files will remain installed in /var/lib/gems/1.9.1/gems/bcrypt-ruby-3.0.1 for inspection.
Results logged to /var/lib/gems/1.9.1/gems/bcrypt-ruby-3.0.1/ext/mri/gem_make.out
and getting an error as well.
What did I miss?
There are similar questions:
`require': no such file to load -- mkmf (LoadError)
Failed to build gem native extension (mkmf (LoadError)) - Ubuntu 12.04
Usually, the solution is:
sudo apt-get install ruby-dev
Or, if that doesn't work, depending on your ruby version, run something like:
sudo apt-get install ruby1.9.1-dev
Should fix your problem.
Still not working? Try the following after installing ruby-dev:
sudo apt-get install make
For WSL (Windows Subsystem for Linux) you need install build-essential package:
sudo apt install build-essential
Just finished a 2 hour wild goose chase trying to solve this. None of the posted answers worked for me. Im on a Mac (Mojave Version 10.14.6, Xcode Version 11.3).
It turns out the ruby file headers were missing so i had to run open /Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_macOS_10.14.pkg
That didnt work for me at first because the version of CommandLineTools i had installed did not have the "Packages" folder. So i uninstalled and reinstalled like this:
rm -rf /Library/Developer/CommandLineTools
xcode-select --install
Then i ran the previous command again:
open /Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_macOS_10.14.pkg
After install the error was fixed!
I had the same issue trying to install jquery-rails. The fix was
sudo apt-get install zlibc zlib1g zlib1g-dev
For MacOS users:
Just do this and easily it will solve your problem:
brew install cocoapods
In case anyone in the future had this problem, I'm using a Mac and just had to install the Command Line Tools using 'xcode-select --install'
I found that I needed to install another version of ruby. So running the command
$ sudo apt-get install ruby1.9.1-dev
and then attempt to install the extension
If you run into issues where it is telling you that you don't have g++ you can run the following command to install it
$ sudo apt-get install g++
Make sure ruby-dev is installed
Make sure make is installed
If you still get the error, look for suggested packages. If you are trying to install something like gem install pg you will also need to install the lib libpq-dev (sudo apt-get install libpq-dev).
I created a small hackMD to install cocoapods on MacOS 10.15 (Catalina) and 11 (Big Sur)
https://hackmd.io/#sBJPlhRESGqCKCqV8ZjP1A/S1UY3W7HP
Installing Cocoapods on MacOS Catalina(MacOS 10.15.X) and Big Sur (MacOS 11)
Make sure you have xcode components are installed.
Download 'Command Line Tools' (about 500MB) directly from this link (Requires you to have apple account)
https://developer.apple.com/downloads/index.action
Install the downloaded file
Click on Install
Install COCOAPODS files in terminal
sudo gem install -n /usr/local/bin cocoapods
This worked for me.
bundle config --global build.snappy --with-opt-dir="$(brew --prefix snappy)"
It also helps to ensure libmysqlclient-dev is installed (Ubuntu 14.04)
What ended up working for me after a few hours of pain..
if you're running brew..
brew install ruby
in the terminal output/log, identify the path where ruby was installed, brew suggests 'You may want to add this to your PATH', so that's what we'll do. For example, mine is
/usr/local/lib/ruby/gems/3.0.0/bin
Add this to your path by running (omitting braces)
echo 'export PATH"{the_path_you_found_above}:$PATH"' >> ~/.bash_profile
then update your environment by running
source ~/.bash_profile
now, try running your install, i.e.,
sudo gem install middleman
If you are a mac user you must need to update the clang version being used
I burnt hours searching this and installed uninstalled xcode commandline tools but it didn't help.
I ran gcc -v and Apple clang version 11.0.0 (clang-1100.0.33.8 was the output.
Then I ran xcode-select -s /Library/Developer/CommandLineTools/ and clang version was updated to Apple clang version 12.0.0 (clang-1200.0.32.29).
bundle install was successful after that.
I hope this may help.
I was making a word search app and I had to install cocoapods and after formatting my mac and reinstalling xcode, I still got the error when I wanted to install cocoapods.
And the solution for this was the following:
It looks like CocoaPods 1.9.0, the latest version as of this writing, depends on a newer version of Ruby than 2.3.7. But macOS Mojave only includes Ruby 2.3.7, so you have a few different options.
Upgrade to macOS Catalina and get Ruby 2.6.3
Use Ruby Version Manager to install a newer version of Ruby
Install an older version of CocoaPods
sudo gem install cocoapods -v 1.8.4
I did 3:
sudo gem install cocoapods -v 1.8.4
In Mac, for me this works:
CONFIGURE_OPTS="--enable-shared" rbenv install 2.2.2
After some search for a solution, it turns out the -dev package is needed, not just ruby1.8. So if you have ruby1.9.1 doing
sudo apt-get install ruby1.9.1-dev
or to install generic ruby version, use (as per #lamplightdev comment):
sudo apt-get install ruby-dev
should fix it.
Try to locate mkmf to see if the file is actually there.
first set your Xcode version on the terminal:
sudo xcode-select -switch /Applications/Xcode.app
then install:
sudo gem install cocoapods

Nokogiri osx 10.5.8 libxml incompatible library version

I have hit upon a stumbling block here trying to get Nokogiri working on osx 10.5.8.
Tried http://nokogiri.org/tutorials/installing_nokogiri.html
and then http://martinisoftware.com/2009/07/31/nokogiri-on-leopard.html
A colleague has been trying to help too but cannot get rid of this error message:
Library not loaded: /usr/local/lib/libxml2.2.dylib
...
Reason: Incompatible library version: nokogiri.bundle requires version 11.0.0 or later, but libxml2.2.dylib provides version 10.0.0
We have tried to compile the gem using the newly installed libraries but still coming up against this error.
Any help or pointers really appreciated!
I have been given a copy of osx 10.6 - could this help??
Thanks
Actually, the answer is in: http://nokogiri.org/tutorials/installing_nokogiri.html
brew install libxml2 libxslt
brew link libxml2 libxslt
Then install libiconv from source:
wget http://ftp.gnu.org/pub/gnu/libiconv/libiconv-1.13.1.tar.gz
tar xvfz libiconv-1.13.1.tar.gz
cd libiconv-1.13.1
./configure --prefix=/usr/local/Cellar/libiconv/1.13.1
make
sudo make install
Then (finally) install nokogiri:
gem install nokogiri --
--with-xml2-include=/usr/local/Cellar/libxml2/2.7.8/include/libxml2
--with-xml2-lib=/usr/local/Cellar/libxml2/2.7.8/lib
--with-xslt-dir=/usr/local/Cellar/libxslt/1.1.26
--with-iconv-include=/usr/local/Cellar/libiconv/1.13.1/include
--with-iconv-lib=/usr/local/Cellar/libiconv/1.13.1/lib
Making sure that you have the versions of libxml2 as you have them in /usr/local/Cellar/libxml (in my case it was 2.8.0).
Happy coding!
The following worked for me on OS-X 10.9.1 (Mavericks):
brew install libxml2 libxslt
gem install nokogiri -- --with-xslt-dir=/usr/local/opt/libsxlt
I just hopped on my 10.5 machine and remembered getting a working version of Nokogiri there - so looked up the command history and here's a cut'n'paste of my exact commands, using Homebrew:
brew install libxml2 libxslt
brew install libiconv
sudo gem install nokogiri -- --with-xslt-dir=/usr/local/homebrew/Cellar/libxslt/1.1.26
Although I'd still upgrade to 10.6.
Older answer:
This answer might help. After resisting OS X package managers, I gave in to Homebrew which helped me solve similar issues. This is for RVM (where I remember going through a similar process) but the key is to tell the nokogiri gem to use the new libxml2 install.
BTW (slightly off-topic but relevant if you're going to 10.6) OOI you can check your mac for a 64 bit EFI in Terminal:
ioreg -l -p IODeviceTree | grep firmware-abi
you should see (if 64 bit):
"firmware-abi" = <"EFI64">
although (as detailed in the replies to that article) this doesn't mean everything's plain sailing...

`require': no such file to load -- mkmf (LoadError)

I was trying to install rails on Ubuntu Natty Narwhal 11.04, using ruby1.9.1.
I installed ruby using apt-get install ruby1.9.1-full which contains the dev package. I googled the error and all have suggested I install the 1.9.1-dev which I already have.
Building native extensions. This could take a while...
ERROR: Error installing rails:
ERROR: Failed to build gem native extension.
/usr/bin/ruby1.8 extconf.rb
extconf.rb:36:in `require': no such file to load -- mkmf (LoadError)
from extconf.rb:36
Gem files will remain installed in /usr/lib/ruby/gems/1.8/gems/bcrypt-ruby-3.0.1 for inspection.
Results logged to /usr/lib/ruby/gems/1.8/gems/bcrypt-ruby-3.0.1/ext/mri/gem_make.out
After some search for a solution it turns out the -dev package is needed, not just ruby1.8. So if you have ruby1.9.1 doing
sudo apt-get install ruby1.9.1-dev
or to install generic ruby version, use (as per #lamplightdev comment):
sudo apt-get install ruby-dev
should fix it.
Try locate mkmf to see if the file is actually there.
This is the answer that worked for me. Was in the comments above, but deserves its rightful place as answer for ubuntu 12.04 ruby 1.8.7
sudo apt-get install ruby-dev
# if above doesnt work make sure you have build essential
sudo apt-get install build-essential
I also needed build-essential installed:
sudo apt-get install build-essential
The problem is still is recursive on Ubuntu 13/04/13.10/14.04
and
sudo apt-get install ruby1.9.1-dev
worked out for me okay. So If you are using Ubuntu 13.04/13.10/14.04 then using this will really come in handy.
This works even if ruby version is 1.9.3. This is because there is no ruby1.9.3-dev available in the Repository...
Have you tried:
sudo apt-get install ruby1.8-dev
I got the similar error when install bundle
sudo apt-get install ruby-dev
Works great for me and solve the problem
Mint 16 ruby1.9.3
I think is a little late but
sudo yum install -y gcc ruby-devel libxml2 libxml2-devel libxslt libxslt-devel
worked for me on fedora.
http://nokogiri.org/tutorials/installing_nokogiri.html
You've Ruby 1.8 so you need to upgrade to at least 1.9 to make it working.
If so, then check How to install a specific version of a ruby gem?
If this won't help, then reinstalling ruby-dev again.
You can use RVM(Ruby version manager) which helps in managing all versions of ruby on your machine , which is very helpful for you development (when migrating to unstable release to stable release )
or for Linux (ubuntu) go for
sudo apt-get install ruby1.8-dev
then sudo gem install rails to verify it do rails -v it will show version on rails
after that you can install bundles (required gems for development)
Ruby version: 2.7.1
gem version: 3.1.3
You need to check the extension that could not be installed, and find the reasons.
Read the mkmf.log file showed at the installation error under "To see why this extension failed to compile, please check the mkmf.log which can be found here" , perhaps there is a missing lib ( sometimes iconv ), and you must install it.
You can search the extension with your package manager(apt, yum, pacman...) too.
(Personal case) Arch Linux->nokogiri
gem install rails
Showed me:
To see why this extension failed to compile, please check the mkmf.log
which can be found here:
/home/user/.gem/ruby/2.7.0/extensions/x86_64-linux/2.7.0/nokogiri-1.10.9/mkmf.log
Go to: https://aur.archlinux.org/packages/ruby-nokogiri/
Make sure you have all dependencies installed
Make sure you have make installed
git clone the package
cd to package
makepkg the package
Hope to help!

Why can't I install the SQLite gem?

I'm try to install the SQLite gem on a Fedora 9 Linux box with Ruby 1.8.6, Rails 2.2.2, gem 1.3, and sqlite-3.5.9. Here's the command I'm running and its results:
sudo gem install sqlite3-ruby
Building native extensions. This could take a while...
ERROR: Error installing sqlite3-ruby:
ERROR: Failed to build gem native extension.
/usr/bin/ruby extconf.rb install sqlite3-ruby
can't find header files for ruby.
Gem files will remain installed in /usr/lib/ruby/gems/1.8/gems/sqlite3-ruby-1.2.4 for inspection.
Results logged to /usr/lib/ruby/gems/1.8/gems/sqlite3-ruby-1.2.4/ext/sqlite3_api/gem_make.out
gem_make.out just repeats what was already sent to the console. How can I install this gem?
The SQLite RubyGem isn't actually a RubyGem, it's a "CGem", IOW it's written in C. This means it has to be compiled and linked to the Ruby interpreter when you install it and in order to do that it needs the C header files for the Ruby interpreter.
If you compile Ruby yourself, those header files will be installed automatically, however, in RedHat-ish systems, such header files are usually packaged in a seperate package, called <whatever>-dev. So, in this case you will need to install the ruby-dev package and possibly the libsqlite3-dev (Ubuntu) or sqlite-devel (Fedora) package as well.
However, you might be better off just installing your Operating System's pre-packaged libsqlite3-ruby package, that way all the dependencies are automatically satisfied.
(Note: all package names pulled out of thin air, might be different on your system.)
You probably need the ruby dev package. For Ubuntu you have to install ruby1.8-dev which includes the ruby header files. A quick google says that the yum package is ruby-devel. so run this:
sudo yum install ruby-devel
I faced problem installing sqlite3-ruby gem on my fedora 13 box.
It was fixed after sudo yum install sqlite-devel
When I had that problem:
gem install sqlite3 -v '1.3.9'
Building native extensions. This could take a while...
ERROR: Error installing sqlite3:
ERROR: Failed to build gem native extension.
For me worked, installing the "libsqlite3-dev" with:
apt-get install libsqlite3-dev
sudo apt-get install ruby-dev
Fixed it for me.
On Ubuntu 9 and 10 try:
sudo apt-get install ruby-dev
sudo apt-get install sqlite3-dev
Then run
gem install sqlite3
Run the following for Fedora OS:
yum install rubygem-sqlite3
On alpine, you need to install the sqlite-dev package.
I also faced this same issue, the problem is that your Linux installation requires the development libraries for SQLite3 to be installed in order to build the gem.
Here's how I fixed the issue
Open your terminal and run the following commands
sudo apt-get install sqlite3
sudo apt-get install libsqlite3-dev
And then try installing Sqlite3 gem again using this command
gem install sqlite3
That's all.
I hope this helps
Do you have all the source code required to build sqlite3-ruby? Gem is trying to compile some C code and cannot find the headers. You can probably use a fedora rpm for sqlite3-ruby (I don't use fedora, but I'm sure one exists) if you prefer to forgo compiling. Personally for ruby stuff, I prefer to use gem rather than a distro's packaging system.
I'm not really familiar with Fedora, but in Ubuntu when you are installing packages you have apt-get, and you have to install the build-essentials which includes gcc and other compilation tools for C. I would say that could be your issue, and you make look into how that can be install either using RPM or apt-get on Fedora.
I fixed the problem on my OLPC (Fedora 9) by installing 'gcc' oddly enough. It seems like it should have been one of those dev packages, but no.
Also, regarding the other packages, the suffix is "-devel", not "-dev", so make sure you get those ending right: "ruby-devel", "sqlite-devel"...
Once you get that installed, if you get errors about your gems being too old "< 1.3.1" when you try to run various rails scripts, eg: script/server or script/console, google "upgrade_rubygems" to fix that problem...
HTH...
Run "sudo yum install sqlite-devel" and then "gem install sqlite3". Had the same problem on my Fedora 15.
I had this same exact issue...instead of gem'ing the missing pieces I used synaptic on unbuntu.
The key package for me was libsqlite-ruby1.9.1 ... I documented my experience (for reference) with this error at :
Sqlite3-gem-error-during-bundle-install
I encountered this error while running bundle install after generating a react-rails app on Fedora 29. I was able to identify a suitable development package by running dnf search sqlite3, then installed it dnf install libsqlite3x-devel. This fixed it for me.

Resources