I have succesfully installed Cytoscape 3.9.1 on my Windows 11 Laptop.
The Program does not start up tho, if I double-click it. Had the issue with older versions too.
Here is the output of the Cytoscape System Checker Script with all the information you need.
Cytoscape System Requirements Checker for Windows
-------------------------------------------------
Target Cytoscape version: 3.9.0
Your Windows version is:
Microsoft Windows [Version 10.0.22621.1105]
Java is installed
More details on Java
--------------------
openjdk version "11.0.7" 2020-04-14
OpenJDK Runtime Environment AdoptOpenJDK (build 11.0.7+10)
OpenJDK 64-Bit Server VM AdoptOpenJDK (build 11.0.7+10, mixed mode)
Your system is 64 bit
Your JAVA_HOME is set to C:\Program Files\Java\jdk-12.0.2
Your Java Major version is 11
Your Java version is at least version 11 as required
Your Java version is no higher than version 11 as required
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 51013 0 0 0 0 0 0 --:--:-- 0:00:01 --:--:-- 0
The "app" store at https://apps.cytoscape.org is reachable
Summary
-------
Success! You are ready to run Cytoscape 3.9.0
Fixed it myself by uninstalling all Java JDKs and JREs I had and then reinstalled Cytoscape (which then automatically installed the correct JDK too).
Related
I tried installing GeneXpert version 5.3 in a laptop with 64 bit processor having Windows 7 Service Pack 1 OS. It says Database conversion has failed. Installation must be aborted.
The error shown during the installation
The properties of the destined Laptop
I recently tried downloading Cytoscape v3.8.2 to my computer (mac OS 11.5.2). I saw the warning about the issue with the latest mac OS update and downloaded the disable-opencl.dummy file and placed it in the CytoscapeConfiguration directory as suggested. I still had trouble opening Cytoscape so I continued looking through the suggested troubleshooting protocol. I checked my Java version and ran the system checker script:
java version "12.0.1" 2019-04-16
Java(TM) SE Runtime Environment (build 12.0.1+12)
Java HotSpot(TM) 64-Bit Server VM (build 12.0.1+12, mixed mode, sharing)
############# Cytoscape System Requirements Checker for Mac ##############
Target Cytoscape version: 3.8.2
Your shell is bash
Fail: This version of OS is not supported: 11.5.2
Please upgrade your system to 10.11 or newer.
I wasn't sure how to proceed with an error that says my systems needs to be upgraded to 10.11 or newer when I'm already running 11.5.2.
Cytoscape requires java 11 and will not work with Java 12, unfortunately. Typically we support only the LTS versions, so we plan on supporting Java 17 (the next LTS version) with Cytoscape 3.10. Try installing Java 11 and see if things work better for you.
-- scooter
I have tried to install the platform software (PSW) many times on my Windows machine and failed.
I have tried to install it on the following OS version (all 64 bits)
Windows 10 Pro build 1803
Windows 10 Pro build 1809
Windows 10 Home build 1809
Windows 10 Home build 1803
According to the release note, PSW is supposed to support the following OS
Windows 10 Nov Update (1511)
Windows 10 Anniversary update (1607)
Windows 10 Creators Update (1703)
Windows 10 Fall Creators Update (1709)
Windows 10 Spring Creators Update (1803)
The error is
“Operating system “Windows 10 Home 10.0.17134” is not supported” or
“Operating system “Windows 10 Pro xxxxxx is” is not supported”
My processor is 8700k and I am using gigabyte Z370 Aorus Ultra Gaming F4 bios, which supports SGX. I turned the bios option on and verified by SGX-test.c
It’s very frustrating since I built the entire machine for this purpose. Did I miss anything?
I am trying to update only the java SDK in WebSphere 8.5.5.9 to 8
So far steps performed:-
IBM Instalation Manager was of version 1.5.2 updated it to 1.8.5
I have the javasdk8 (8.0.2.10-WS-IBMWASJAVA-Win) downloaded already.
Started IBM Installation Manager-> Install -> selected IBM WebSphere SDK JAVA Tech Edition -> Next -> Getting message as Operating system is below the recommended minimum level for this product.
It does gives a link to check the details but its not much clear.
You can find the minimum supported levels for Java 8 here:
http://www-01.ibm.com/support/docview.wss?uid=swg27045339
From that doc:
In 8.5.5.14 and later, or when selecting "IBM WebSphere SDK Java
Technology Edition 8.0" at installation time on 8.5.5.11 and later
prior operating system releases (such as Windows 2008, HP-UX 11iv2,
RedHat Enterprise Linux 5, SLES 11 .0, SLES 10, Solaris 10, and z/OS
1.12) will no longer be supported.
Operating System minimums:
AIX
AIX 6.1 TL7
AIX 7.1 TL3
HP-UX IA64
HP-UX 11i v3 (11.31)
IBM i
IBM i V7R1
Linux
RedHat Enterprise Linux 6
RedHat Enterprise Linux 7
SLES 11.1 (SP1)
SLES 12
Ubuntu 12.04 LTS
Ubuntu 14.04 LTS
Ubuntu 16.04 LTS
Windows
Windows 7 service pack 1
Windows 8 (not Metro)
Windows Server 2012
Windows Server 2016
Solaris
Solaris 11
z/OS
z/OS 1.13
z/OS 2.1
z/OS 2.2
Hope that helps.
Every time I start my iOS project, Xamarin Studio is building the code which takes about 40 seconds... even if I haven't changed any code/settings. Can someone point out what I've done wrong? Here are some details -
A new simple PCL + iOS project doesn't rebuild every time so I'm assuming it must be a setting somewhere in my larger project?
I'm referencing Release build MvvmCross DLLs from a clone of MvvmCross-Binaries which are outside the project directory (not NuGet)
A build output of a simple re-run with no code changes is on pastebin here
My environment details are below
Is there anything else I can provide to help triage this?
Xamarin Studio
Version 5.7 (build 661)
Installation UUID: 34bb5f0c-bdbc-4184-bbd0-b6241f44d933
Runtime:
Mono 3.12.0 ((detached/a813491)
GTK+ 2.24.23 (Raleigh theme)
Package version: 312000068
Apple Developer Tools
Xcode 6.1.1 (6611)
Build 6A2008a
Xamarin.iOS
Version: 8.6.0.51 (Indie Edition)
Hash: dfb682f
Branch:
Build date: 2015-01-08 13:39:32-0500
Xamarin.Android
Version: 4.20.0.28 (Starter Edition)
Android SDK: /Users/simonmatthews/Library/Developer/Xamarin/android-sdk-macosx
Supported Android versions:
2.1 (API level 7)
2.2 (API level 8)
2.3 (API level 10)
3.1 (API level 12)
4.0.3 (API level 15)
4.4 (API level 19)
Java SDK: /usr
No Java runtime present, requesting install.
Xamarin.Mac
Not Installed
Build Information
Release ID: 507000661
Git revision: b70bab61da996da29045ea8ee8aed1a6faedbe78
Build date: 2015-01-05 16:31:31-05
Xamarin addins: 82f6c71490562d6cd125a09287f441902fdac3d7
Operating System
Mac OS X 10.10.1
Darwin Simons-MacBook 14.0.0 Darwin Kernel Version 14.0.0
Fri Sep 19 00:26:44 PDT 2014
root:xnu-2782.1.97~2/RELEASE_X86_64 x86_64