After attempting to update to Neo4j 3.4 the DB fails to start. Here is the log:
WARNING: This command does not appear to be running with administrative rights. Some commands may fail e.g. Start/Stop
2018-05-23 16:17:25.306+0000 INFO ======== Neo4j 3.4.0 ========
2018-05-23 16:17:25.365+0000 INFO Starting... 2018-05-23
16:17:27.607+0000 INFO Initiating metrics... 2018-05-23
16:17:33.331+0000 INFO Sending metrics to CSV file at
C:\Users\miz9013\AppData\Roaming\Neo4j
Desktop\Application\neo4jDatabases\database-5aba9bf6-8425-4e66-a065-6a5987cff891\current\metrics
2018-05-23 16:17:34.349+0000 INFO Bolt enabled on 127.0.0.1:11002.
2018-05-23 16:17:35.937+0000 ERROR Failed to start Neo4j: Starting
Neo4j failed: Component
'org.neo4j.server.database.LifecycleManagingDatabase#3af236d0' was
successfully initialized, but failed to start. Please see the attached
cause exception "org.neo4j.kernel.api.security.SecurityContext".
Starting Neo4j failed: Component
'org.neo4j.server.database.LifecycleManagingDatabase#3af236d0' was
successfully initialized, but failed to start. Please see the attached
cause exception "org.neo4j.kernel.api.security.SecurityContext".
org.neo4j.server.ServerStartupException: Starting Neo4j failed:
Component
'org.neo4j.server.database.LifecycleManagingDatabase#3af236d0' was
successfully initialized, but failed to start. Please see the attached
cause exception "org.neo4j.kernel.api.security.SecurityContext". at
org.neo4j.server.exception.ServerStartupErrors.translateToServerStartupError(ServerStartupErrors.java:68)
at
org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:220)
at
org.neo4j.server.ServerBootstrapper.start(ServerBootstrapper.java:111)
at
org.neo4j.server.ServerBootstrapper.start(ServerBootstrapper.java:79)
at
com.neo4j.server.enterprise.CommercialEntryPoint.main(CommercialEntryPoint.java:22)
Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component
'org.neo4j.server.database.LifecycleManagingDatabase#3af236d0' was
successfully initialized, but failed to start. Please see the attached
cause exception "org.neo4j.kernel.api.security.SecurityContext". at
org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:466)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at
org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:212)
... 3 more Caused by: java.lang.RuntimeException: Error starting
org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory,
C:\Users\miz9013\AppData\Roaming\Neo4j
Desktop\Application\neo4jDatabases\database-5aba9bf6-8425-4e66-a065-6a5987cff891\current\data\databases\graph.db
at
org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.initFacade(GraphDatabaseFacadeFactory.java:212)
at
org.neo4j.kernel.enterprise.EnterpriseGraphDatabase.(EnterpriseGraphDatabase.java:39)
at
org.neo4j.server.enterprise.OpenEnterpriseNeoServer.lambda$static$1(OpenEnterpriseNeoServer.java:78)
at
org.neo4j.server.database.LifecycleManagingDatabase.start(LifecycleManagingDatabase.java:88)
at
org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:445)
... 5 more Caused by: org.neo4j.kernel.lifecycle.LifecycleException:
Component 'org.neo4j.kernel.impl.proc.Procedures#787178b1' was
successfully initialized, but failed to start. Please see the attached
cause exception "org.neo4j.kernel.api.security.SecurityContext". at
org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:466)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at
org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.initFacade(GraphDatabaseFacadeFactory.java:208)
... 9 more Caused by: java.lang.NoClassDefFoundError:
Lorg/neo4j/kernel/api/security/SecurityContext; at
java.lang.Class.getDeclaredFields0(Native Method) at
java.lang.Class.privateGetDeclaredFields(Class.java:2583) at
java.lang.Class.getDeclaredFields(Class.java:1916) at
org.neo4j.kernel.impl.proc.FieldInjections.setters(FieldInjections.java:90)
at
org.neo4j.kernel.impl.proc.ReflectiveProcedureCompiler.compileProcedure(ReflectiveProcedureCompiler.java:290)
at
org.neo4j.kernel.impl.proc.ReflectiveProcedureCompiler.compileProcedure(ReflectiveProcedureCompiler.java:242)
at
org.neo4j.kernel.impl.proc.ProcedureJarLoader.loadProcedures(ProcedureJarLoader.java:90)
at
org.neo4j.kernel.impl.proc.ProcedureJarLoader.loadProceduresFromDir(ProcedureJarLoader.java:78)
at org.neo4j.kernel.impl.proc.Procedures.start(Procedures.java:323)
at
org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:445)
... 11 more Caused by: java.lang.ClassNotFoundException:
org.neo4j.kernel.api.security.SecurityContext at
java.net.URLClassLoader.findClass(URLClassLoader.java:381) at
java.lang.ClassLoader.loadClass(ClassLoader.java:424) at
sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:335) at
java.lang.ClassLoader.loadClass(ClassLoader.java:357) ... 21 more
2018-05-23 16:17:35.951+0000 INFO Neo4j Server shutdown initiated by
request WARNING: This command does not appear to be running with
administrative rights. Some commands may fail e.g. Start/Stop
2018-05-23 19:10:38.733+0000 INFO ======== Neo4j 3.4.0 ========
2018-05-23 19:10:38.799+0000 INFO Starting... 2018-05-23
19:10:42.536+0000 INFO Initiating metrics... 2018-05-23
19:10:48.101+0000 INFO Sending metrics to CSV file at
C:\Users\miz9013\AppData\Roaming\Neo4j
Desktop\Application\neo4jDatabases\database-5aba9bf6-8425-4e66-a065-6a5987cff891\current\metrics
2018-05-23 19:10:48.848+0000 INFO Bolt enabled on 127.0.0.1:11002.
2018-05-23 19:10:50.174+0000 ERROR Failed to start Neo4j: Starting
Neo4j failed: Component
'org.neo4j.server.database.LifecycleManagingDatabase#3af236d0' was
successfully initialized, but failed to start. Please see the attached
cause exception "org.neo4j.kernel.api.security.SecurityContext".
Starting Neo4j failed: Component
'org.neo4j.server.database.LifecycleManagingDatabase#3af236d0' was
successfully initialized, but failed to start. Please see the attached
cause exception "org.neo4j.kernel.api.security.SecurityContext".
org.neo4j.server.ServerStartupException: Starting Neo4j failed:
Component
'org.neo4j.server.database.LifecycleManagingDatabase#3af236d0' was
successfully initialized, but failed to start. Please see the attached
cause exception "org.neo4j.kernel.api.security.SecurityContext". at
org.neo4j.server.exception.ServerStartupErrors.translateToServerStartupError(ServerStartupErrors.java:68)
at
org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:220)
at
org.neo4j.server.ServerBootstrapper.start(ServerBootstrapper.java:111)
at
org.neo4j.server.ServerBootstrapper.start(ServerBootstrapper.java:79)
at
com.neo4j.server.enterprise.CommercialEntryPoint.main(CommercialEntryPoint.java:22)
Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component
'org.neo4j.server.database.LifecycleManagingDatabase#3af236d0' was
successfully initialized, but failed to start. Please see the attached
cause exception "org.neo4j.kernel.api.security.SecurityContext". at
org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:466)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at
org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:212)
... 3 more Caused by: java.lang.RuntimeException: Error starting
org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory,
C:\Users\miz9013\AppData\Roaming\Neo4j
Desktop\Application\neo4jDatabases\database-5aba9bf6-8425-4e66-a065-6a5987cff891\current\data\databases\graph.db
at
org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.initFacade(GraphDatabaseFacadeFactory.java:212)
at
org.neo4j.kernel.enterprise.EnterpriseGraphDatabase.(EnterpriseGraphDatabase.java:39)
at
org.neo4j.server.enterprise.OpenEnterpriseNeoServer.lambda$static$1(OpenEnterpriseNeoServer.java:78)
at
org.neo4j.server.database.LifecycleManagingDatabase.start(LifecycleManagingDatabase.java:88)
at
org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:445)
... 5 more Caused by: org.neo4j.kernel.lifecycle.LifecycleException:
Component 'org.neo4j.kernel.impl.proc.Procedures#787178b1' was
successfully initialized, but failed to start. Please see the attached
cause exception "org.neo4j.kernel.api.security.SecurityContext". at
org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:466)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at
org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.initFacade(GraphDatabaseFacadeFactory.java:208)
... 9 more Caused by: java.lang.NoClassDefFoundError:
Lorg/neo4j/kernel/api/security/SecurityContext; at
java.lang.Class.getDeclaredFields0(Native Method) at
java.lang.Class.privateGetDeclaredFields(Class.java:2583) at
java.lang.Class.getDeclaredFields(Class.java:1916) at
org.neo4j.kernel.impl.proc.FieldInjections.setters(FieldInjections.java:90)
at
org.neo4j.kernel.impl.proc.ReflectiveProcedureCompiler.compileProcedure(ReflectiveProcedureCompiler.java:290)
at
org.neo4j.kernel.impl.proc.ReflectiveProcedureCompiler.compileProcedure(ReflectiveProcedureCompiler.java:242)
at
org.neo4j.kernel.impl.proc.ProcedureJarLoader.loadProcedures(ProcedureJarLoader.java:90)
at
org.neo4j.kernel.impl.proc.ProcedureJarLoader.loadProceduresFromDir(ProcedureJarLoader.java:78)
at org.neo4j.kernel.impl.proc.Procedures.start(Procedures.java:323)
at
org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:445)
... 11 more Caused by: java.lang.ClassNotFoundException:
org.neo4j.kernel.api.security.SecurityContext at
java.net.URLClassLoader.findClass(URLClassLoader.java:381) at
java.lang.ClassLoader.loadClass(ClassLoader.java:424) at
sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:335) at
java.lang.ClassLoader.loadClass(ClassLoader.java:357) ... 21 more
2018-05-23 19:10:50.176+0000 INFO Neo4j Server shutdown initiated by
request WARNING: This command does not appear to be running with
administrative rights. Some commands may fail e.g. Start/Stop
2018-05-23 19:11:19.679+0000 INFO ======== Neo4j 3.4.0 ========
2018-05-23 19:11:19.726+0000 INFO Starting... 2018-05-23
19:11:22.465+0000 INFO Initiating metrics... 2018-05-23
19:11:28.419+0000 INFO Sending metrics to CSV file at C:\\Neo4j
Desktop\Application\neo4jDatabases\database-5aba9bf6-8425-4e66-a065-6a5987cff891\current\metrics
2018-05-23 19:11:29.145+0000 INFO Bolt enabled on 127.0.0.1:11002.
2018-05-23 19:11:31.478+0000 ERROR Failed to start Neo4j: Starting
Neo4j failed: Component
'org.neo4j.server.database.LifecycleManagingDatabase#3af236d0' was
successfully initialized, but failed to start. Please see the attached
cause exception "org.neo4j.kernel.api.security.SecurityContext".
Starting Neo4j failed: Component
'org.neo4j.server.database.LifecycleManagingDatabase#3af236d0' was
successfully initialized, but failed to start. Please see the attached
cause exception "org.neo4j.kernel.api.security.SecurityContext".
org.neo4j.server.ServerStartupException: Starting Neo4j failed:
Component
'org.neo4j.server.database.LifecycleManagingDatabase#3af236d0' was
successfully initialized, but failed to start. Please see the attached
cause exception "org.neo4j.kernel.api.security.SecurityContext". at
org.neo4j.server.exception.ServerStartupErrors.translateToServerStartupError(ServerStartupErrors.java:68)
at
org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:220)
at
org.neo4j.server.ServerBootstrapper.start(ServerBootstrapper.java:111)
at
org.neo4j.server.ServerBootstrapper.start(ServerBootstrapper.java:79)
at
com.neo4j.server.enterprise.CommercialEntryPoint.main(CommercialEntryPoint.java:22)
Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component
'org.neo4j.server.database.LifecycleManagingDatabase#3af236d0' was
successfully initialized, but failed to start. Please see the attached
cause exception "org.neo4j.kernel.api.security.SecurityContext". at
org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:466)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at
org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:212)
... 3 more Caused by: java.lang.RuntimeException: Error starting
org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory,
C:\Roaming\Neo4j
Desktop\Application\neo4jDatabases\database-5aba9bf6-8425-4e66-a065-6a5987cff891\current\data\databases\graph.db
at
org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.initFacade(GraphDatabaseFacadeFactory.java:212)
at
org.neo4j.kernel.enterprise.EnterpriseGraphDatabase.(EnterpriseGraphDatabase.java:39)
at
org.neo4j.server.enterprise.OpenEnterpriseNeoServer.lambda$static$1(OpenEnterpriseNeoServer.java:78)
at
org.neo4j.server.database.LifecycleManagingDatabase.start(LifecycleManagingDatabase.java:88)
at
org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:445)
... 5 more Caused by: org.neo4j.kernel.lifecycle.LifecycleException:
Component 'org.neo4j.kernel.impl.proc.Procedures#787178b1' was
successfully initialized, but failed to start. Please see the attached
cause exception "org.neo4j.kernel.api.security.SecurityContext". at
org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:466)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at
org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.initFacade(GraphDatabaseFacadeFactory.java:208)
... 9 more Caused by: java.lang.NoClassDefFoundError:
Lorg/neo4j/kernel/api/security/SecurityContext; at
java.lang.Class.getDeclaredFields0(Native Method) at
java.lang.Class.privateGetDeclaredFields(Class.java:2583) at
java.lang.Class.getDeclaredFields(Class.java:1916) at
org.neo4j.kernel.impl.proc.FieldInjections.setters(FieldInjections.java:90)
at
org.neo4j.kernel.impl.proc.ReflectiveProcedureCompiler.compileProcedure(ReflectiveProcedureCompiler.java:290)
at
org.neo4j.kernel.impl.proc.ReflectiveProcedureCompiler.compileProcedure(ReflectiveProcedureCompiler.java:242)
at
org.neo4j.kernel.impl.proc.ProcedureJarLoader.loadProcedures(ProcedureJarLoader.java:90)
at
org.neo4j.kernel.impl.proc.ProcedureJarLoader.loadProceduresFromDir(ProcedureJarLoader.java:78)
at org.neo4j.kernel.impl.proc.Procedures.start(Procedures.java:323)
at
org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:445)
... 11 more Caused by: java.lang.ClassNotFoundException:
org.neo4j.kernel.api.security.SecurityContext at
java.net.URLClassLoader.findClass(URLClassLoader.java:381) at
java.lang.ClassLoader.loadClass(ClassLoader.java:424) at
sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:335) at
java.lang.ClassLoader.loadClass(ClassLoader.java:357) ... 21 more
2018-05-23 19:11:31.482+0000 INFO Neo4j Server shutdown initiated by
request
One reason can be an incompatible version of a plugin like APOC, see GitHub repository of APOC for more information: https://github.com/neo4j-contrib/neo4j-apoc-procedures/issues/734
Related
I want to upgrade from 2.2.9 to 3.4.0. I have seen both .extension are different.V2.2.9 .graphdb but V3.4.0 .db also i'm getting error.
Is there an option available to upgrade to 3.4.0? Please advise.
2018-08-14 19:11:15.489+0000 ERROR Failed to start Neo4j: Starting Neo4j failed: Component 'org.neo4j.server.database.LifecycleManagingDatabase#59a67c3a' was successfully initialized, but failed to start. Please see the attached cause exception "Unknown store version 'v0.A.5'". Starting Neo4j failed: Component 'org.neo4j.server.database.LifecycleManagingDatabase#59a67c3a' was successfully initialized, but failed to start. Please see the attached cause exception "Unknown store version 'v0.A.5'".
org.neo4j.server.ServerStartupException: Starting Neo4j failed: Component 'org.neo4j.server.database.LifecycleManagingDatabase#59a67c3a' was successfully initialized, but failed to start. Please see the attached cause exception "Unknown store version 'v0.A.5'".
at org.neo4j.server.exception.ServerStartupErrors.translateToServerStartupError(ServerStartupErrors.java:68)
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:220)
at org.neo4j.server.ServerBootstrapper.start(ServerBootstrapper.java:111)
at org.neo4j.server.ServerBootstrapper.start(ServerBootstrapper.java:79)
at com.neo4j.server.enterprise.CommercialEntryPoint.main(CommercialEntryPoint.java:22)
Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component 'org.neo4j.server.database.LifecycleManagingDatabase#59a67c3a' was successfully initialized, but failed to start. Please see the attached cause exception "Unknown store version 'v0.A.5'".
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:466)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:212)
... 3 more
Caused by: java.lang.RuntimeException: Error starting org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory, C:\Users\manickamv\.Neo4jDesktop\neo4jDatabases\database-10ce8a02-4af1-41bf-940c-b7ef6f48046f\installation-3.4.1\data\databases\graph.db
at org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.initFacade(GraphDatabaseFacadeFactory.java:212)
at org.neo4j.kernel.enterprise.EnterpriseGraphDatabase.<init>(EnterpriseGraphDatabase.java:39)
at org.neo4j.server.enterprise.OpenEnterpriseNeoServer.lambda$static$1(OpenEnterpriseNeoServer.java:78)
at org.neo4j.server.database.LifecycleManagingDatabase.start(LifecycleManagingDatabase.java:88)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:445)
... 5 more
Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component 'org.neo4j.kernel.NeoStoreDataSource#2de366bb' was successfully initialized, but failed to start. Please see the attached cause exception "Unknown store version 'v0.A.5'".
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:466)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at org.neo4j.kernel.impl.transaction.state.DataSourceManager.start(DataSourceManager.java:100)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:445)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.initFacade(GraphDatabaseFacadeFactory.java:208)
... 9 more
Caused by: java.lang.IllegalArgumentException: Unknown store version 'v0.A.5'
at org.neo4j.kernel.impl.store.format.RecordFormatSelector.selectForVersion(RecordFormatSelector.java:101)
at org.neo4j.kernel.impl.store.NeoStores.verifyRecordFormat(NeoStores.java:211)
at org.neo4j.kernel.impl.store.NeoStores.<init>(NeoStores.java:143)
at org.neo4j.kernel.impl.store.StoreFactory.openNeoStores(StoreFactory.java:160)
at org.neo4j.kernel.impl.store.StoreFactory.openAllNeoStores(StoreFactory.java:124)
at org.neo4j.kernel.impl.storageengine.impl.recordstorage.RecordStorageEngine.<init>(RecordStorageEngine.java:200)
at org.neo4j.kernel.NeoStoreDataSource.buildStorageEngine(NeoStoreDataSource.java:574)
at org.neo4j.kernel.NeoStoreDataSource.start(NeoStoreDataSource.java:434)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:445)
... 14 more
You need to upgrade in steps, Neo4j recommends you upgrade to the most up to date version of the current minor version, in your case, I would try upgrading to 2.3.12, then going to 3.2.12, then 3.4.5 - it's mainly as there have been a lot of changes since 2.2.x which need to be done in steps.
The neo4j server is not able to start and i am getting an error java.lang.NegativeArraySizeException
I have added the complete trace below:
2017-04-17 06:31:12.832+0000 ERROR Failed to start Neo4j: Starting Neo4j failed: Component 'org.neo4j.server.database.LifecycleManagingDatabase#40e621fd' was successfully initialized, but failed to start. Please see attached cause exception. Starting Neo4j failed: Component 'org.neo4j.server.database.LifecycleManagingDatabase#40e621fd' was successfully initialized, but failed to start. Please see attached cause exception.
org.neo4j.server.ServerStartupException: Starting Neo4j failed: Component 'org.neo4j.server.database.LifecycleManagingDatabase#40e621fd' was successfully initialized, but failed to start. Please see attached cause exception.
at org.neo4j.server.exception.ServerStartupErrors.translateToServerStartupError(ServerStartupErrors.java:68)
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:227)
at org.neo4j.server.ServerBootstrapper.start(ServerBootstrapper.java:91)
at org.neo4j.server.ServerBootstrapper.start(ServerBootstrapper.java:68)
at org.neo4j.server.CommunityEntryPoint.main(CommunityEntryPoint.java:28)
Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component 'org.neo4j.server.database.LifecycleManagingDatabase#40e621fd' was successfully initialized, but failed to start. Please see attached cause exception.
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:443)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:199)
... 3 more
Caused by: java.lang.RuntimeException: Error starting org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory, /var/lib/neo4j/data/databases/graph.db
at org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.initFacade(GraphDatabaseFacadeFactory.java:193)
at org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.newFacade(GraphDatabaseFacadeFactory.java:124)
at org.neo4j.server.CommunityNeoServer.lambda$static$0(CommunityNeoServer.java:57)
at org.neo4j.server.database.LifecycleManagingDatabase.start(LifecycleManagingDatabase.java:89)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:433)
... 5 more
Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component 'org.neo4j.kernel.recovery.Recovery#26a34b49' failed to initialize. Please see attached cause exception.
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.init(LifeSupport.java:415)
at org.neo4j.kernel.lifecycle.LifeSupport.init(LifeSupport.java:62)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:98)
at org.neo4j.kernel.NeoStoreDataSource.start(NeoStoreDataSource.java:517)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:433)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at org.neo4j.kernel.impl.transaction.state.DataSourceManager.start(DataSourceManager.java:100)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:433)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.initFacade(GraphDatabaseFacadeFactory.java:189)
... 9 more
Caused by: java.lang.NegativeArraySizeException
at org.neo4j.kernel.impl.transaction.command.PhysicalLogCommandReaderV3_0_2.readDynamicRecord(PhysicalLogCommandReaderV3_0_2.java:492)
at org.neo4j.kernel.impl.transaction.command.PhysicalLogCommandReaderV3_0_2.readDynamicRecords(PhysicalLogCommandReaderV3_0_2.java:506)
at org.neo4j.kernel.impl.transaction.command.PhysicalLogCommandReaderV3_0_2.readPropertyRecord(PhysicalLogCommandReaderV3_0_2.java:564)
at org.neo4j.kernel.impl.transaction.command.PhysicalLogCommandReaderV3_0_2.visitPropertyCommand(PhysicalLogCommandReaderV3_0_2.java:189)
at org.neo4j.kernel.impl.transaction.command.PhysicalLogCommandReaderV3_0_2.read(PhysicalLogCommandReaderV3_0_2.java:76)
at org.neo4j.kernel.impl.transaction.command.BaseCommandReader.read(BaseCommandReader.java:49)
at org.neo4j.kernel.impl.transaction.command.BaseCommandReader.read(BaseCommandReader.java:34)
at org.neo4j.kernel.impl.transaction.log.entry.LogEntryParsersV2_3$3.parse(LogEntryParsersV2_3.java:94)
at org.neo4j.kernel.impl.transaction.log.entry.VersionAwareLogEntryReader.readLogEntry(VersionAwareLogEntryReader.java:98)
at org.neo4j.kernel.impl.transaction.log.LogEntryCursor.next(LogEntryCursor.java:54)
at org.neo4j.kernel.recovery.LatestCheckPointFinder.find(LatestCheckPointFinder.java:78)
at org.neo4j.kernel.recovery.PositionToRecoverFrom.apply(PositionToRecoverFrom.java:53)
at org.neo4j.kernel.recovery.DefaultRecoverySPI.getPositionToRecoverFrom(DefaultRecoverySPI.java:80)
at org.neo4j.kernel.recovery.Recovery.init(Recovery.java:80)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.init(LifeSupport.java:405)
I have running the neo4j community version from last 5 months and it was working fine. But today all the storage space on my machine where neo4j is running got exhausted. So I deleted few files not related to neo4j. But still, neo4j was not responding to the queries. So I restarted neo4j. But it does not start anymore. Can anyone point me in the right direction?
Here are the logs
ERROR Failed to start Neo4j: Starting Neo4j failed: Component 'org.neo4j.server.database.LifecycleManagingDatabase#652d6ca4' was successfully initialized, but failed to start. Please see attached cause exception. Starting Neo4j failed: Component 'org.neo4j.server.database.LifecycleManagingDatabase#652d6ca4' was successfully initialized, but failed to start. Please see attached cause exception.
org.neo4j.server.ServerStartupException: Starting Neo4j failed: Component 'org.neo4j.server.database.LifecycleManagingDatabase#652d6ca4' was successfully initialized, but failed to start. Please see attached cause exception.
at org.neo4j.server.exception.ServerStartupErrors.translateToServerStartupError(ServerStartupErrors.java:68)
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:215)
at org.neo4j.server.ServerBootstrapper.start(ServerBootstrapper.java:90)
at org.neo4j.server.ServerBootstrapper.start(ServerBootstrapper.java:67)
at org.neo4j.server.CommunityEntryPoint.main(CommunityEntryPoint.java:28)
Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component 'org.neo4j.server.database.LifecycleManagingDatabase#652d6ca4' was successfully initialized, but failed to start. Please see attached cause exception.
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:444)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:187)
... 3 more
Caused by: java.lang.RuntimeException: Error starting org.neo4j.kernel.impl.factory.CommunityFacadeFactory, /var/lib/neo4j/data/databases/graph.db
at org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.newFacade(GraphDatabaseFacadeFactory.java:144)
at org.neo4j.kernel.impl.factory.CommunityFacadeFactory.newFacade(CommunityFacadeFactory.java:40)
at org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.newFacade(GraphDatabaseFacadeFactory.java:108)
at org.neo4j.server.CommunityNeoServer.lambda$static$0(CommunityNeoServer.java:55)
at org.neo4j.server.database.LifecycleManagingDatabase.start(LifecycleManagingDatabase.java:89)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:434)
... 5 more
Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component 'org.neo4j.kernel.recovery.Recovery#39ef543' failed to initialize. Please see attached cause exception.
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.init(LifeSupport.java:416)
at org.neo4j.kernel.lifecycle.LifeSupport.init(LifeSupport.java:62)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:98)
at org.neo4j.kernel.NeoStoreDataSource.start(NeoStoreDataSource.java:511)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:434)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at org.neo4j.kernel.impl.transaction.state.DataSourceManager.start(DataSourceManager.java:99)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:434)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.newFacade(GraphDatabaseFacadeFactory.java:140)
... 10 more
Caused by: java.lang.IllegalArgumentException: Unknown entry type -1 for version -1. At position LogPosition{logVersion=79, byteOffset=85258244} and entry version V2_1
at org.neo4j.kernel.impl.transaction.log.entry.LogEntryVersion.entryParser(LogEntryVersion.java:141)
at org.neo4j.kernel.impl.transaction.log.entry.VersionAwareLogEntryReader.readLogEntry(VersionAwareLogEntryReader.java:84)
at org.neo4j.kernel.impl.transaction.log.LogEntryCursor.next(LogEntryCursor.java:54)
at org.neo4j.kernel.recovery.LatestCheckPointFinder.find(LatestCheckPointFinder.java:78)
at org.neo4j.kernel.recovery.PositionToRecoverFrom.apply(PositionToRecoverFrom.java:53)
at org.neo4j.kernel.recovery.DefaultRecoverySPI.getPositionToRecoverFrom(DefaultRecoverySPI.java:80)
at org.neo4j.kernel.recovery.Recovery.init(Recovery.java:80)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.init(LifeSupport.java:406)
... 19 more
So I upgraded my Neo4j cluster instalation to 3.0.3 and it seems I can not load the database that comes with the instalation. This is the log file
<code>2016-06-28 14:11:20.879+0000 INFO Starting...
2016-06-28 14:11:21.620+0000 INFO Write transactions to database disabled
2016-06-28 14:11:22.483+0000 INFO Bolt enabled on localhost:7687.
2016-06-28 14:11:22.504+0000 INFO Initiating metrics...
2016-06-28 14:11:24.344+0000 INFO Attempting to join cluster of [192.168.1.91:5001, 192.168.1.92:5001, 192.168.1.93:5001]
2016-06-28 14:11:54.762+0000 ERROR Failed to start Neo4j: Starting Neo4j failed: Component 'org.neo4j.server.database.LifecycleManagingData$
org.neo4j.server.ServerStartupException: Starting Neo4j failed: Component 'org.neo4j.server.database.LifecycleManagingDatabase#1f7853af' wa$
at org.neo4j.server.exception.ServerStartupErrors.translateToServerStartupError(ServerStartupErrors.java:68)
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:217)
at org.neo4j.server.ServerBootstrapper.start(ServerBootstrapper.java:87)
at org.neo4j.server.ServerBootstrapper.start(ServerBootstrapper.java:66)
at org.neo4j.server.enterprise.EnterpriseEntryPoint.main(EnterpriseEntryPoint.java:32)
Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component 'org.neo4j.server.database.LifecycleManagingDatabase#1f7853af' was succ$
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:444)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:189)
... 3 more
Caused by: java.lang.RuntimeException: Error starting org.neo4j.kernel.ha.factory.HighlyAvailableFacadeFactory, /opt/neo4j/neo4j-enterprise$
at org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.newFacade(GraphDatabaseFacadeFactory.java:144)
at org.neo4j.kernel.ha.factory.HighlyAvailableFacadeFactory.newFacade(HighlyAvailableFacadeFactory.java:42)
at org.neo4j.kernel.ha.HighlyAvailableGraphDatabase.<init>(HighlyAvailableGraphDatabase.java:41)
at org.neo4j.server.enterprise.EnterpriseNeoServer.lambda$static$0(EnterpriseNeoServer.java:80)
at org.neo4j.server.database.LifecycleManagingDatabase.start(LifecycleManagingDatabase.java:89)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:434)
... 5 more
Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component 'org.neo4j.cluster.client.ClusterJoin#4b6942a0' was successfully initia$
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:444)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:434)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.newFacade(GraphDatabaseFacadeFactory.java:140)
... 10 more
Caused by: java.util.concurrent.TimeoutException
at org.neo4j.cluster.statemachine.StateMachineProxyFactory$ResponseFuture.get(StateMachineProxyFactory.java:300)
</code>
Is there any fresh db I could try to load ? Thanks.
Is that on a single instance or cluster?
Best try it in standalone mode first.
How did you upgrade? Using the admin-tool with
neo4j-admin --mode database --from neo4j-2x-db --to neo4j-3x-db ?
see: https://neo4j.com/guides/upgrade/#neo4j-3-0
and: http://neo4j.com/docs/operations-manual/3.0/#upgrade-instructions-2x
I use neo4j-community-2.0.1-unix.tar.gz:
I delete old data in the database:
t#konrad:~/neo4j$ rm -rf ./data/
I start the application:
t#konrad:~/neo4j$ ./bin/neo4j console
: Max 1024 open files allowed, minimum of 40 000 recommended. See the
Neo4j manual. Starting Neo4j Server console-mode...
/home/triptop/neo4j/data/log was missing, recreating... Using
additional JVM arguments: -server -XX:+DisableExplicitGC
-Dorg.neo4j.server.properties=conf/neo4j-server.properties -Djava.util.logging.config.file=conf/logging.properties -Dlog4j.configuration=file:conf/log4j.properties -XX:+UseConcMarkSweepGC -XX:+CMSClassUnloadingEnabled 2014-04-02 10:10:01.149+0000 INFO [API] Setting startup timeout to: 120000ms
based on -1 2014-04-02 10:12:29.005+0000 ERROR [org.neo4j]: Exception
when stopping
org.neo4j.kernel.impl.nioneo.xa.NeoStoreXaDataSource#4ec143d8
java.nio.channels.ClosedByInterruptException
java.lang.RuntimeException:
java.nio.channels.ClosedByInterruptException
at org.neo4j.kernel.impl.transaction.xaframework.LogBackedXaDataSource.stop(LogBackedXaDataSource.java:73)
at org.neo4j.kernel.impl.nioneo.xa.NeoStoreXaDataSource.stop(NeoStoreXaDataSource.java:448)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:523)
at org.neo4j.kernel.lifecycle.LifeSupport.stop(LifeSupport.java:155)
at org.neo4j.kernel.impl.transaction.XaDataSourceManager.stop(XaDataSourceManager.java:185)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:523)
at org.neo4j.kernel.lifecycle.LifeSupport.stop(LifeSupport.java:155)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:123)
at org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:307)
at org.neo4j.kernel.EmbeddedGraphDatabase.(EmbeddedGraphDatabase.java:63)
at org.neo4j.graphdb.factory.GraphDatabaseFactory$1.newDatabase(GraphDatabaseFactory.java:92)
at org.neo4j.graphdb.factory.GraphDatabaseBuilder.newGraphDatabase(GraphDatabaseBuilder.java:198)
at org.neo4j.server.database.CommunityDatabase.createDb(CommunityDatabase.java:62)
at org.neo4j.server.database.CommunityDatabase.start(CommunityDatabase.java:120)
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:158)
at org.neo4j.server.Bootstrapper.start(Bootstrapper.java:87)
at org.neo4j.server.Bootstrapper.main(Bootstrapper.java:50) Caused by: java.nio.channels.ClosedByInterruptException
at java.nio.channels.spi.AbstractInterruptibleChannel.end(AbstractInterruptibleChannel.java:202)
at sun.nio.ch.FileChannelImpl.writeInternal(FileChannelImpl.java:743)
at sun.nio.ch.FileChannelImpl.write(FileChannelImpl.java:723)
at org.neo4j.kernel.impl.transaction.xaframework.DirectMappedLogBuffer.writeOut(DirectMappedLogBuffer.java:164)
at org.neo4j.kernel.impl.transaction.xaframework.DirectMappedLogBuffer.force(DirectMappedLogBuffer.java:178)
at org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.releaseCurrentLogFile(XaLogicalLog.java:700)
at org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.close(XaLogicalLog.java:725)
at org.neo4j.kernel.impl.transaction.xaframework.LogBackedXaDataSource.stop(LogBackedXaDataSource.java:69)
... 16 more 2014-04-02 10:12:29.037+0000 ERROR [org.neo4j]: Exception when stopping
org.neo4j.kernel.impl.transaction.XaDataSourceManager#2bf11e9f
Component
'org.neo4j.kernel.impl.nioneo.xa.NeoStoreXaDataSource#4ec143d8' failed
to stop. Please see attached cause exception.
org.neo4j.kernel.lifecycle.LifecycleException: Component
'org.neo4j.kernel.impl.nioneo.xa.NeoStoreXaDataSource#4ec143d8' failed
to stop. Please see attached cause exception.
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:528)
at org.neo4j.kernel.lifecycle.LifeSupport.stop(LifeSupport.java:155)
at org.neo4j.kernel.impl.transaction.XaDataSourceManager.stop(XaDataSourceManager.java:185)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:523)
at org.neo4j.kernel.lifecycle.LifeSupport.stop(LifeSupport.java:155)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:123)
at org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:307)
at org.neo4j.kernel.EmbeddedGraphDatabase.(EmbeddedGraphDatabase.java:63)
at org.neo4j.graphdb.factory.GraphDatabaseFactory$1.newDatabase(GraphDatabaseFactory.java:92)
at org.neo4j.graphdb.factory.GraphDatabaseBuilder.newGraphDatabase(GraphDatabaseBuilder.java:198)
at org.neo4j.server.database.CommunityDatabase.createDb(CommunityDatabase.java:62)
at org.neo4j.server.database.CommunityDatabase.start(CommunityDatabase.java:120)
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:158)
at org.neo4j.server.Bootstrapper.start(Bootstrapper.java:87)
at org.neo4j.server.Bootstrapper.main(Bootstrapper.java:50) Caused by: java.lang.RuntimeException:
java.nio.channels.ClosedByInterruptException
at org.neo4j.kernel.impl.transaction.xaframework.LogBackedXaDataSource.stop(LogBackedXaDataSource.java:73)
at org.neo4j.kernel.impl.nioneo.xa.NeoStoreXaDataSource.stop(NeoStoreXaDataSource.java:448)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:523)
... 14 more Caused by: java.nio.channels.ClosedByInterruptException
at java.nio.channels.spi.AbstractInterruptibleChannel.end(AbstractInterruptibleChannel.java:202)
at sun.nio.ch.FileChannelImpl.writeInternal(FileChannelImpl.java:743)
at sun.nio.ch.FileChannelImpl.write(FileChannelImpl.java:723)
at org.neo4j.kernel.impl.transaction.xaframework.DirectMappedLogBuffer.writeOut(DirectMappedLogBuffer.java:164)
at org.neo4j.kernel.impl.transaction.xaframework.DirectMappedLogBuffer.force(DirectMappedLogBuffer.java:178)
at org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.releaseCurrentLogFile(XaLogicalLog.java:700)
at org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.close(XaLogicalLog.java:725)
at org.neo4j.kernel.impl.transaction.xaframework.LogBackedXaDataSource.stop(LogBackedXaDataSource.java:69)
... 16 more 2014-04-02 10:12:29.057+0000 ERROR [org.neo4j]: Lifecycle exception Component
'org.neo4j.kernel.impl.transaction.XaDataSourceManager#2bf11e9f'
failed to stop. Please see attached cause exception.
org.neo4j.kernel.lifecycle.LifecycleException: Component
'org.neo4j.kernel.impl.transaction.XaDataSourceManager#2bf11e9f'
failed to stop. Please see attached cause exception.
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:528)
at org.neo4j.kernel.lifecycle.LifeSupport.stop(LifeSupport.java:155)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:123)
at org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:307)
at org.neo4j.kernel.EmbeddedGraphDatabase.(EmbeddedGraphDatabase.java:63)
at org.neo4j.graphdb.factory.GraphDatabaseFactory$1.newDatabase(GraphDatabaseFactory.java:92)
at org.neo4j.graphdb.factory.GraphDatabaseBuilder.newGraphDatabase(GraphDatabaseBuilder.java:198)
at org.neo4j.server.database.CommunityDatabase.createDb(CommunityDatabase.java:62)
at org.neo4j.server.database.CommunityDatabase.start(CommunityDatabase.java:120)
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:158)
at org.neo4j.server.Bootstrapper.start(Bootstrapper.java:87)
at org.neo4j.server.Bootstrapper.main(Bootstrapper.java:50) Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component
'org.neo4j.kernel.impl.nioneo.xa.NeoStoreXaDataSource#4ec143d8' failed
to stop. Please see attached cause exception.
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:528)
at org.neo4j.kernel.lifecycle.LifeSupport.stop(LifeSupport.java:155)
at org.neo4j.kernel.impl.transaction.XaDataSourceManager.stop(XaDataSourceManager.java:185)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:523)
... 11 more Caused by: java.lang.RuntimeException: java.nio.channels.ClosedByInterruptException
at org.neo4j.kernel.impl.transaction.xaframework.LogBackedXaDataSource.stop(LogBackedXaDataSource.java:73)
at org.neo4j.kernel.impl.nioneo.xa.NeoStoreXaDataSource.stop(NeoStoreXaDataSource.java:448)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:523)
... 14 more Caused by: java.nio.channels.ClosedByInterruptException
at java.nio.channels.spi.AbstractInterruptibleChannel.end(AbstractInterruptibleChannel.java:202)
at sun.nio.ch.FileChannelImpl.writeInternal(FileChannelImpl.java:743)
at sun.nio.ch.FileChannelImpl.write(FileChannelImpl.java:723)
at org.neo4j.kernel.impl.transaction.xaframework.DirectMappedLogBuffer.writeOut(DirectMappedLogBuffer.java:164)
at org.neo4j.kernel.impl.transaction.xaframework.DirectMappedLogBuffer.force(DirectMappedLogBuffer.java:178)
at org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.releaseCurrentLogFile(XaLogicalLog.java:700)
at org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.close(XaLogicalLog.java:725)
at org.neo4j.kernel.impl.transaction.xaframework.LogBackedXaDataSource.stop(LogBackedXaDataSource.java:69)
... 16 more 2014-04-02 10:12:29.080+0000 ERROR [org.neo4j]: Chained lifecycle exception Component
'org.neo4j.kernel.extension.KernelExtensions#55aa75c1' was
successfully initialized, but failed to start. Please see attached
cause exception. org.neo4j.kernel.lifecycle.LifecycleException:
Component 'org.neo4j.kernel.extension.KernelExtensions#55aa75c1' was
successfully initialized, but failed to start. Please see attached
cause exception.
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:509)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:115)
at org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:307)
at org.neo4j.kernel.EmbeddedGraphDatabase.(EmbeddedGraphDatabase.java:63)
at org.neo4j.graphdb.factory.GraphDatabaseFactory$1.newDatabase(GraphDatabaseFactory.java:92)
at org.neo4j.graphdb.factory.GraphDatabaseBuilder.newGraphDatabase(GraphDatabaseBuilder.java:198)
at org.neo4j.server.database.CommunityDatabase.createDb(CommunityDatabase.java:62)
at org.neo4j.server.database.CommunityDatabase.start(CommunityDatabase.java:120)
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:158)
at org.neo4j.server.Bootstrapper.start(Bootstrapper.java:87)
at org.neo4j.server.Bootstrapper.main(Bootstrapper.java:50) Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component
'org.neo4j.index.lucene.LuceneKernelExtension#287c20ab' was
successfully initialized, but failed to start. Please see attached
cause exception.
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:509)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:115)
at org.neo4j.kernel.extension.KernelExtensions.start(KernelExtensions.java:118)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:503)
... 10 more Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component
'org.neo4j.index.impl.lucene.LuceneDataSource#2f4c076f' was
successfully initialized, but failed to start. Please see attached
cause exception.
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:509)
at org.neo4j.kernel.lifecycle.LifeSupport.bringToState(LifeSupport.java:411)
at org.neo4j.kernel.lifecycle.LifeSupport.add(LifeSupport.java:324)
at org.neo4j.kernel.impl.transaction.XaDataSourceManager.registerDataSource(XaDataSourceManager.java:236)
at org.neo4j.index.lucene.LuceneKernelExtension.start(LuceneKernelExtension.java:79)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:503)
... 13 more Caused by: java.lang.RuntimeException: java.nio.channels.ClosedByInterruptException
at org.neo4j.kernel.impl.index.IndexProviderStore.(IndexProviderStore.java:85)
at org.neo4j.index.impl.lucene.LuceneDataSource.newIndexStore(LuceneDataSource.java:302)
at org.neo4j.index.impl.lucene.LuceneDataSource.start(LuceneDataSource.java:225)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:503)
... 18 more Caused by: java.nio.channels.ClosedByInterruptException
at java.nio.channels.spi.AbstractInterruptibleChannel.end(AbstractInterruptibleChannel.java:202)
at sun.nio.ch.FileChannelImpl.position(FileChannelImpl.java:290)
at org.neo4j.kernel.impl.index.IndexProviderStore.write(IndexProviderStore.java:169)
at org.neo4j.kernel.impl.index.IndexProviderStore.create(IndexProviderStore.java:153)
at org.neo4j.kernel.impl.index.IndexProviderStore.(IndexProviderStore.java:61)
... 21 more 2014-04-02 10:12:29.141+0000 DEBUG [API] Failed to start database. 2014-04-02 10:12:29.144+0000 DEBUG [API]
org.neo4j.server.ServerStartupException: Startup took longer than
120000ms, and was stopped. You can disable this behavior by setting
'org.neo4j.server.startup_timeout' to 0. Error code: 1
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:211)
~[neo4j-server-2.0.1.jar:2.0.1]
at org.neo4j.server.Bootstrapper.start(Bootstrapper.java:87) [neo4j-server-2.0.1.jar:2.0.1]
at org.neo4j.server.Bootstrapper.main(Bootstrapper.java:50) [neo4j-server-2.0.1.jar:2.0.1] 2014-04-02 10:12:29.180+0000 DEBUG
[API] Failed to start Neo Server on port [7478]
Any ideas why this may happen?
My java is:
$ java -version
java version "1.7.0_51"
Java(TM) SE Runtime Environment (build 1.7.0_51-b13)
Java HotSpot(TM) 64-Bit Server VM (build 24.51-b03, mixed mode)
Your system only allow 1024 open files. Read the first line of your startup message:
Max 1024 open files allowed, minimum of 40 000 recommended. See the Neo4j manual
see http://docs.neo4j.org/chunked/stable/linux-performance-guide.html#_setting_the_number_of_open_files for details.