Neo4J 3.3.3 database got corrupted as there was not enough disk space and no way to fix it? - neo4j

Question

I ran out of disk space and my Neo4J 3.3.3 database doesn't start anymore showing the following error:
2018-04-16 21:10:35.148+0000 ERROR Failed to start Neo4j: Starting
Neo4j failed: Component
'org.neo4j.server.database.LifecycleManagingDatabase#7e5c856f' was
successfully initialized, but failed to start. Please see the attached
cause exception "null. At position LogPosition{logVersion=250,
byteOffset=198709181} and entry version V3_0_10". Starting Neo4j
failed: Component
'org.neo4j.server.database.LifecycleManagingDatabase#7e5c856f' was
successfully initialized, but failed to start. Please see the attached
cause exception "null. At position LogPosition{logVersion=250,
byteOffset=198709181} and entry version V3_0_10".
When I run neo4j-admin check-consistency --database=graph.db I get:
unexpected error: null. At position LogPosition{logVersion=250,
byteOffset=198709181} and entry version V3_0_10
So probably some logs got corrupted.
Does Neo4J have any tools to fix this situation?
I looked at https://github.com/neo4j/neo4j-javascript-driver/issues/300 - but it didn't help me as I don't even get any error message just the one above.
I tried https://github.com/jexp/store-utils but when I run
copy-store.sh community ~/neo4j-community-3.3.3/data/databases/graph.db ~/target.db
it says
[ERROR] COMPILATION ERROR : [INFO]
------------------------------------------------------------- [ERROR] /home/noduslabs/repair/store-utils/src/main/java/org/neo4j/tool/StoreCopy.java:[96,18]
error: cannot find symbol [ERROR] class StoreCopy
/home/noduslabs/repair/store-utils/src/main/java/org/neo4j/tool/StoreCopy.java:[96,59]
error: cannot find symbol [ERROR] class StoreCopy
/home/noduslabs/repair/store-utils/src/main/java/org/neo4j/tool/StoreCopy.java:[97,37]
error: cannot find symbol
Running that same store-utils but branch 32 seem to go further but then the same error occurs:
[ERROR] Failed to execute goal
org.codehaus.mojo:exec-maven-plugin:1.1:java (default-cli) on project
store-util: An exception occured while executing the Java class. null:
InvocationTargetException: Error starting
org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory,
/home/noduslabs/neo4j-community-3.3.3/data/databases/graph.db:
Component 'org.neo4j.kernel.recovery.Recovery#4168eb66' failed to
initialize. Please see the attached cause exception "null. At position
LogPosition{logVersion=250, byteOffset=198709181} and entry version
V3_0_10". -> [Help 1]
org.apache.maven.lifecycle.LifecycleExecutionException: Failed to
execute goal org.codehaus.mojo:exec-maven-plugin:1.1:java
(default-cli) on project store-util: An exception occured while
executing the Java class. null
at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:213)
So basically I'm stuck and there's not way to fix the DB, right?