Incorrect hyperlinking in LaTeX - latex

So far the hyperref package in LaTeX has automatically linked all the items in my report correctly. But there is one that did not get linked properly, possibly because I manually added it to the table of contents like this:
\addcontentsline{toc}{chapter}{Bibliography}
How do I fix this?

You have to use the \phantomsection macro just before or after the \addtocontentsline. This instructs hyperref to add an anchor at that point. Also, take into account that you have to run LaTeX several times to make this anchor to be in the exact place.

If you're using a standard LaTeX document class, such as report, you can use the tocbibind package, and then you won't need the \addcontentsline command and the hyperlinks should work correctly. From the documentation:
The tocbibind package enables the titles of the Table of Contents, the List of Figure, the List of Tables, the Bibliography and the Index all to be added to the Table of Contents.
I'd also suggest looking at the memoir class, which also solves this problem. It's intended to be a replacement for the standard report and book classes, and provides lots of options and commands for customisation.

Related

Including \lstlistoflistings and reference it in the table of contents

I have a question about including a directory for listings in my table of content. I'm using \lstlistoflistings and \tableofcontents and the \usepackage{listings}. Now my question:
When I generate the list of listings, it is filled with the listings in my document, but it isn't referenced in my table of contents. There is no entry in my table of contents for the list of listings. Can someone imagine, what i've done wrong? Or is there a special trick for including ist?
Thank you!
It depends a lot on the \documentclass you are using. But for the standard classes (book,article, etc.) this should suffice.
Add this line:
\addcontentsline{toc}{section}{Listings}
right before \lstlistoflistings.
This will probably not work for other classes. If it doesn't work, please tell which class you are using.

How to add a (large) code appendix in LaTeX / LyX?

I'd like to add a code appendix to my LyX document. There are a few options I already considered, but they all have their problems.
I know a bit about listings, but one problem with those is that, if I copy & paste my code into them, I lose all enters/newlines. Since the code is too large to correct by hand, I was wondering if there is an alternative.
In LyX there is the possibility of inserting child documents, but that seems to be only for .tex files. Would have been ideal if I could just insert my .java file as a child document.
I could print the code to PDF, but it will include margins that mess up the final document, since the PDF is placed on the left margin of the final document and then there is the margin of the PDF. Also, this PDF always contains the entire code and white areas where not the entire page has been filled.
Does anyone have good alternative?
The listings package found here
http://www.ctan.org/tex-archive/macros/latex/contrib/listings/
allows the include of external source code files (look into the reference for \lstinputlisting).
EDIT: here you find some samples how to use it:
http://en.wikibooks.org/wiki/LaTeX/Packages/Listings
If you need to copy-paste code to LyX listing box then use Edit -> Paste Special -> Seletion or Ctrl+Alt+V.
For what it's worth, at least the 2.0 versions of LyX have the ability to include listings as child documents. Insert, File, Child Document, and choose from the dropdown box "Program Listing". This uses the listings package and lets you keep your source in its own file.
If listings doesn't support your language, you can always use something like highlight or source-highlight to generate a latex snippet of syntax-highlighted code that you can add as a child document of type "Input"
Yes, if you copy&paste code into the LyX listings box, you lose all newlines, but you can preprocess your code (insert an extra newline below each line):
$ cat foo.java | sed -e 's/$/\n/' > bar.java
Then you can copy&paste the new file bar.java and everything will be ok.

Why Bibliography and References appears in Latex TOC?

I am using these commands for including references:
\addcontentsline{toc}{chapter}{References}
\bibliographystyle{agsm}
\bibliography{dissrefs}
The problem is that in the table of contents both References and Bibliography appear, while I just want one to appear. Why is this happening? Can I customise the table of contents entry to be just one of them?
I am using MikTex 2.8 and TexMaker 2.1.
I dont think that you need to use \addcontentsline{toc} bibtex should do it automatically. At least I don't recall ever needing it...
Have you tried commenting out that line?
Edit regarding OPs comment on changing the title of the bibliography:
The bibliography's title can be changed by (to for instance "New Title") using \renewcommand\refname{New Title} for articles and \renewcommand\bibname{New Title} for books.
Instructions are read and processed in the order they appear, I think your problem is related to that order. Try moving things around (I believe that all settings should be put before \tableofcontents, but I'm not sure about that, I'v not used latex for a long time)

LaTeX: disable or turn off hyperlinking for table of contents?

I want a table of contents, but I don't want each line to be a clickable hyperlink. How do I do this?
Details:
I am using the \anothertoc command from the shorttoc package to "import" the TOC from another document. Works fine, except that all the links for the imported TOC are broken (obviously)... so, I want to de-linkify them.
Not sure whether this is relevant, but the TOC that I'm importing is from a document that uses the hyperref package. I have a feeling that hyperref is making the TOCs hyperlinked, but I can't find any option for the hyperref package to disable hyperlinking for TOCs.
You can consider the linktoc parameter when importing the package with for instance
\usepackage[linktoc=none]{hyperref} or
\usepackage[linktoc=page]{hyperref}.
You can refer to paragraph 5.13 of the manual at https://mirrors.chevalier.io/CTAN/macros/latex/contrib/hyperref/doc/hyperref-doc.pdf
How are you "importing" the toc?
I'd have a look at the hyperref manual at : http://www.tug.org/applications/hyperref/manual.html
The simple solution would be to turn off hyperlinking in the document toc that you are importing, though I realize that might not be possible.
A solution using Normadize's answer based on \NoHyper working well with the shorttoc package:
{\protect\NoHyper%
\anothertoc{other-document}{Toc from other document}{1}
\protect\endNoHyper}%

Adding MS-Word-like comments in LaTeX

I need a way to add text comments in "Word style" to a Latex document. I don't mean to comment the source code of the document. What I want is a way to add corrections, suggestions, etc. to the document, so that they don't interrupt the text flow, but that would still make it easy for everyone to know, which part of the sentence they are related to. They should also "disappear" when compiling the document for printing.
At first, I thought about writing a new command, that would just forward the input to \marginpar{}, and when compiling for printing would just make the definition empty. The problem is you have no guarantee where the comments will appear and you will not be able to distinguish them from the other marginpars.
Any idea?
todonotes is another package that makes nice looking callouts. You can see a number of examples in the documentation.
Since LaTeX is a text format, if you want to show someone the differences in a way that they can use them (and cherry pick from them) use the standard diff tool (e.g., diff -u orig.tex new.tex > docdiffs). This is the best way to annotate something like LaTeX documents, and can be easily used by anyone involved in the production of a document from LaTeX sources. You can then use standard LaTeX comments in your patch to explain the changes, and they can be very easily integrated. If the document lives in a version control system of some sort, just use the VCS to generate a patch file that can be reviewed.
I have used changes.sty, which gives basic change colouring:
\added{new text}
\deleted{old text}
\replaced{new text}{old text}
All of these take an optional parameter with the initials of the author who did this change. This results in different colours used, and these initials are displayed superscripted after the changed text.
\replaced[MI]{new text}{old text}
You can hide the change marks by giving the option final to the changes package.
This is very basic, and comments are not supported, but it might help.
My little home-rolled "fixme" tool uses \marginpar where possible and goes inline in places (like captions) where that is hard to arrange. This works out because I don't often use margin paragraphs for other things. This does mean you can't finalize the layout until everything is fixed, but I don't feel much pain from that...
Other than that I heartily agree with Michael about using standard tools and version control.
See also:
Tips for collaboratively editing a LaTeX document (which addresses you main question...)
https://stackoverflow.com/questions/193298/best-practices-in-latex
and a self-plug:
How do I get Emacs to fill sentences, but not paragraphs?
You could also try the trackchanges package.
You can use the changebar package to highlight areas of text that have been affected.
If you don't want to do the markup manually (which can be tedious and interrupt the flow of editing) the neat latexdiff utility will take a diff of your document and produce a version of it with markup added to visually display the changes between the two versions in the typeset output.
This would be my preferred solution, although I haven't tested it out on large, multi-file documents.
The best package I know is Easy Review that provides the commenting functionality into LaTeX environment. For example, you can use the following simple commands such as \add{NEW TEXT}, \remove{OLD TEXT}, \replace{OLD TEXT}{NEW TEXT}, \comment{TEXT}{COMMENT}, \highlight{TEXT}, and \alert{TEXT}.
Some examples can be found here.
The todonotes package looks great, but if that proves too cumbersome to use, a simple solution is just to use footnotes (e.g. in red to separate them from regular footnotes).
Package trackchanges.sty works exactly the way changes.sty. See #Svante's reply.
It has easy to remember commands and you can change how edits will appear after compiling the document. You can also hide the edits for printing.

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